Arep005196.1
Basic Information
- Insect
- Acrobasis repandana
- Gene Symbol
- GATA-B
- Assembly
- GCA_963576875.1
- Location
- OY756217.1:24680418-24693837[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.37 1.3e+03 0.0 0.1 6 16 13 23 12 27 0.81 2 3 8.3e-18 2.9e-14 53.3 3.9 1 34 164 196 164 198 0.97 3 3 3.3e-19 1.1e-15 57.8 6.3 1 34 233 265 233 267 0.97
Sequence Information
- Coding Sequence
- ATGAGTGTACCTTCGCCCGATTTGGGCTCGTCCGCCGACACAGCCACATCCGGGTGGCGACCGAATGGCGCGAGTGCAGGCGCGGGCGGCGCAGTATACCACACGAGAGGACCATACCCAGAAGGGTCTCCGTACTTCAATGGCGCCGAGCTGGCTGCTCAGCAGAGTTGGACGCCTCCCTCAGGCTCCCCGACGTACCGGCTGGCCGGCGAGCCCGGCAGCGTGCTGGAGTACGAGCCGTCCCCGCCGGGGCCGGGCTCGGAGACGCCGCCGGCGGGCGCGCTCCCCGCCTTCAGCTCGCGCTTCGGCGCTGCCTTCTGCCCCACCTCGCGGCCCTCCACCGTGTACGGCGCCGCTGCTCTCACCGCCAATGCATACACCTCGCAGGACATTTGGACCCTGGACTGCAGCAGACGCCCCCCGCAGCTCTCCGCGGCCGCCAGTCTCTCTGCAATCGAGATGGCGGAGTTGTTCACTGAGGGCCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCACGCCGCGCACTCGCTCGCGCCGCCCGCACACGATATGGGGTCGAAGCGGCCCGGCATGTCGTGCAGCAACTGCCACACGACGACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAGCATCAACAGACCCATCGCCATGAAGAAAGACTCCATACAGACGAGAAAACGGAAACCGAAGAATAGCATCAAAACTGAAAGGAACCTCAAGACAGCAGTGCAGCGGACAGTGAGCTCGGCCATCAAGATGGGAAACCTAAGCGAGAGTGTCAACGGGGTGGGGGGGGGCGTCGGCATCGGCGGCGCGCGGTCGCCCATGGCCATGAACTACGCGTACATGCAGCAGGCGCTGAAGCTGGAGGAGCCGCCGCCGGCGCACGCGCACTACGGCGCGTTCGAGGACGGCGAGTACCGGCGCGGCGCCGGCGACGAGCGCTGCGAGCGCCCCACCGTCGTCTCCATGGGCAGCTGA
- Protein Sequence
- MSVPSPDLGSSADTATSGWRPNGASAGAGGAVYHTRGPYPEGSPYFNGAELAAQQSWTPPSGSPTYRLAGEPGSVLEYEPSPPGPGSETPPAGALPAFSSRFGAAFCPTSRPSTVYGAAALTANAYTSQDIWTLDCSRRPPQLSAAASLSAIEMAELFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHSLAPPAHDMGSKRPGMSCSNCHTTTTSLWRRNAHGETVCNACGLYYKLHSINRPIAMKKDSIQTRKRKPKNSIKTERNLKTAVQRTVSSAIKMGNLSESVNGVGGGVGIGGARSPMAMNYAYMQQALKLEEPPPAHAHYGAFEDGEYRRGAGDERCERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00720922; iTF_01302971;
- 90% Identity
- -
- 80% Identity
- -