Basic Information

Insect: Acrobasis repandana
Gene Symbol: ZFAT
Assembly: GCA_963576875.1
Location: OY756225.1:2236382-2242814[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0009 0.078 14.4 1.6 2 23 31 52 30 52 0.94

2 15 0.001 0.091 14.2 0.8 2 23 91 113 90 113 0.93

3 15 0.0012 0.11 13.9 3.6 1 23 115 137 115 137 0.99

4 15 4.6 4e+02 2.7 0.7 1 23 144 166 144 166 0.85

5 15 0.18 15 7.2 0.0 1 23 171 193 171 193 0.89

6 15 4.2 3.7e+02 2.8 0.6 3 22 222 241 221 243 0.88

7 15 1 91 4.7 2.3 1 11 250 260 250 270 0.87

8 15 4.4e-05 0.0039 18.5 0.1 1 23 278 301 278 301 0.90

9 15 0.036 3.1 9.3 3.6 1 23 309 332 309 332 0.96

10 15 0.00011 0.0097 17.2 0.0 2 23 338 361 337 361 0.95

11 15 2.2 2e+02 3.7 5.3 1 23 365 387 365 387 0.97

12 15 0.0014 0.12 13.8 0.3 1 23 392 414 392 414 0.97

13 15 0.029 2.5 9.6 2.6 3 23 422 442 420 442 0.94

14 15 3.2e-06 0.00028 22.1 5.4 1 23 448 470 448 470 0.99

15 15 9.7e-05 0.0084 17.4 2.7 1 23 476 499 476 499 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0009	0.078	14.4	1.6	2	23	31	52	30	52	0.94
2	15	0.001	0.091	14.2	0.8	2	23	91	113	90	113	0.93
3	15	0.0012	0.11	13.9	3.6	1	23	115	137	115	137	0.99
4	15	4.6	4e+02	2.7	0.7	1	23	144	166	144	166	0.85
5	15	0.18	15	7.2	0.0	1	23	171	193	171	193	0.89
6	15	4.2	3.7e+02	2.8	0.6	3	22	222	241	221	243	0.88
7	15	1	91	4.7	2.3	1	11	250	260	250	270	0.87
8	15	4.4e-05	0.0039	18.5	0.1	1	23	278	301	278	301	0.90
9	15	0.036	3.1	9.3	3.6	1	23	309	332	309	332	0.96
10	15	0.00011	0.0097	17.2	0.0	2	23	338	361	337	361	0.95
11	15	2.2	2e+02	3.7	5.3	1	23	365	387	365	387	0.97
12	15	0.0014	0.12	13.8	0.3	1	23	392	414	392	414	0.97
13	15	0.029	2.5	9.6	2.6	3	23	422	442	420	442	0.94
14	15	3.2e-06	0.00028	22.1	5.4	1	23	448	470	448	470	0.99
15	15	9.7e-05	0.0084	17.4	2.7	1	23	476	499	476	499	0.98

Sequence Information

Coding Sequence: ATGTCGGTCTCCAAGCAGCCCGGGACCGCGGCCTCTCCGCAATACCAGCACCCTTTCAAACTAACCACTATTGACTTGATTGGTGGCATCAAGTGCCCCATTTGTCATTTAACATTCTCAAACAAGAAAGATTATGACAGCCATTATGTAAATCATAACACTGGGAACCCTAACATAATATACATGTGTGTTGCTTGCAACAAGGAAATAGTTGGTTACCCAACTTTCCGTAATCACTGCTACTCCAGACACGTTATCAAGGATAGATTGACATGCGAATATTGCTCAAAACAGTTTTCAAAAACAAGCGTACTTCAGCAACATATTGACAACATGCACAAATTTAAATGTGTGCATTGTAAAAAAGAATTTCCATCAAAGAAAGAAACACAAATGCATCAAATCACCCACTTGAGCGACAGTCCTCCGTACAAATGCCAATCTTGCGGGCAGCAGATAGACAGTGCCGATACCTGCGAACAACACATCGACGACCACTGCACCCTGACGTACTCCTGTCCGATCTGCAATGAAGTCATACCCGACAAGTCTGAAAGTGTAGACCACTTGGTCAAACATTTTGGAAAAATTGAAGAACCGTTACCGGAATCTATAGTTGAACTTACATCGGAAAGCTCCATAGATTTGCTTGGCGGTATCCTGTGCGTCTATTGCGACACTACACACAAGACAAGAGTAGAATTGGAGCTTCATTTTGCTGAATATCATATTGACAAAGATGTGATATACTCCTGTAATATATGCGGAAAGCAGTATGACAAATATCCTCCATTTGGCAACCATTGCTACTACCATTACTCCAAGGATAAATTTGAGTGCGACGACTGCGATAGATCGTTCCCCCGGCTCTCGCTGCTGGTGCAGCACGCGGAGGCGTTCCACTCGGGGCCCGCGGCAAGCGCCTTCTCGTGCGCGCACTGCCACAACACGTACGCGAGCGAGAAGCGGCTACGGACGCATTTGCGGGAAGTGCACGGAGCTGAGTGCGTCGAGTGTCCCGACAAGGGCTGCGGGAAGATGTTTGACAACCCTAAAGACCTGATATACCACCAAGCAGTCCATAAGACAGGGCACCGATGCAAGCACTGCCTCCTACAGTTCACGTCTCTTGTGGCCTGCGAGAGACACATCTCTGTGCATTGCAAGAAACAGTACTCGTGCCCTGTCTGCACCCGGAGCTATGCAGAGAAATACCTTATTATGAAACACATCTCCCAACACTTCTCCTCCGTTCTGCATCTTTGCAAAGTCTGCGGGAAGATATTCAACGCCAAGCATCGCCTTGTCGAACACTCGAAAGTACATTCGGACACCCGGAACTACAAATGCACTTATTGCGACAAGTCATTCACGAAAACGAACCATTTGAAGCAGCATCTGAACATTCACACAGGTTTGAAACCATACCAATGCAACTTATGTCCGAAGACATTTGGGAGTTATCCAAACTACCACAAGCATGTACGCCGTATGCATAACGGTATTAAAGTTAATAAGCCTCGAAAGCAGATAACCGAAGTCATGATAGTAAATGAGAAAGAAAAAGTTAAAGCGAAAGTTTCAAAGAAAGGTAGCGAACCTCGAAACAATAATAATGTGATGGAAGATTTGGTCGACTCAACTAGTTCTGAGTTGGATGCATATGCTTTTGTGGAGGAATCTGATGACAGTATGGTGGAGTCAGACGGTATTAACCCCTTGGCCATGGAGCATGAGTCGAAGATCTTTGAGGCTGCAGTCAAAGGAAAGTACACCAACCTCCACACAACCCTCAACAATGTTCCAGAGTTCACGGAAATACTGCCGGAGAACAATCATGATGCTTTTGTAGCTGCCGTGACTCCATCGTTCGGCCCGGCGCTGGCCCCGccggccgcgccgccgcccgccgaGTACGGCCCGGACTTCGGCAAGGACGTGACCGGGTTCATCGACCTCGACGACCAGCTGCCGCACATCGACCCGCTGCTCACCATCAAGAACCAGCCCGCGCCGGCGTACGAGCCCTACCCGCAGCCGGCCCCCTCGCCCTACGTGAAGTGGGAGCCCCTCATCTCCAAGGTGTACGCCGCGCCCTACGGCTACGACGCAGACGCCGCCATCTTGTCCGTCCTCAACACGGACATTTACTAA
Protein Sequence: MSVSKQPGTAASPQYQHPFKLTTIDLIGGIKCPICHLTFSNKKDYDSHYVNHNTGNPNIIYMCVACNKEIVGYPTFRNHCYSRHVIKDRLTCEYCSKQFSKTSVLQQHIDNMHKFKCVHCKKEFPSKKETQMHQITHLSDSPPYKCQSCGQQIDSADTCEQHIDDHCTLTYSCPICNEVIPDKSESVDHLVKHFGKIEEPLPESIVELTSESSIDLLGGILCVYCDTTHKTRVELELHFAEYHIDKDVIYSCNICGKQYDKYPPFGNHCYYHYSKDKFECDDCDRSFPRLSLLVQHAEAFHSGPAASAFSCAHCHNTYASEKRLRTHLREVHGAECVECPDKGCGKMFDNPKDLIYHQAVHKTGHRCKHCLLQFTSLVACERHISVHCKKQYSCPVCTRSYAEKYLIMKHISQHFSSVLHLCKVCGKIFNAKHRLVEHSKVHSDTRNYKCTYCDKSFTKTNHLKQHLNIHTGLKPYQCNLCPKTFGSYPNYHKHVRRMHNGIKVNKPRKQITEVMIVNEKEKVKAKVSKKGSEPRNNNNVMEDLVDSTSSELDAYAFVEESDDSMVESDGINPLAMEHESKIFEAAVKGKYTNLHTTLNNVPEFTEILPENNHDAFVAAVTPSFGPALAPPAAPPPAEYGPDFGKDVTGFIDLDDQLPHIDPLLTIKNQPAPAYEPYPQPAPSPYVKWEPLISKVYAAPYGYDADAAILSVLNTDIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00012283;
90% Identity: -
80% Identity: -