Basic Information

Insect: Acrobasis repandana
Gene Symbol: -
Assembly: GCA_963576875.1
Location: OY756219.1:16988898-16997793[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0058 0.5 11.8 1.0 3 23 620 641 619 641 0.96

2 23 0.41 36 6.0 0.3 1 22 1031 1052 1031 1052 0.95

3 23 8.1 7e+02 1.9 0.3 1 22 1094 1115 1094 1117 0.82

4 23 0.024 2.1 9.9 0.7 3 21 1128 1146 1126 1147 0.94

5 23 0.31 27 6.4 0.2 2 23 1155 1177 1154 1177 0.89

6 23 0.0053 0.46 11.9 0.1 3 23 1198 1219 1196 1219 0.96

7 23 0.0033 0.29 12.6 1.7 1 23 1225 1248 1225 1248 0.95

8 23 0.15 13 7.4 0.0 1 23 1273 1296 1273 1296 0.90

9 23 0.023 2 10.0 3.4 1 23 1301 1323 1301 1323 0.97

10 23 0.013 1.1 10.7 0.2 1 23 1329 1352 1329 1352 0.95

11 23 0.0028 0.24 12.8 1.3 1 23 1368 1390 1368 1390 0.97

12 23 0.00021 0.019 16.3 1.8 1 23 1438 1461 1438 1461 0.97

13 23 0.0014 0.12 13.7 1.6 1 23 1522 1545 1522 1545 0.96

14 23 0.0013 0.12 13.8 2.1 2 23 1570 1592 1569 1592 0.95

15 23 0.1 9.1 7.9 0.1 2 23 1598 1620 1597 1620 0.93

16 23 0.012 1 10.8 0.2 1 21 1665 1685 1665 1686 0.95

17 23 0.0015 0.13 13.7 0.6 1 23 1696 1718 1696 1718 0.93

18 23 0.00013 0.012 17.0 0.3 2 23 1810 1832 1810 1832 0.93

19 23 2.1e-07 1.9e-05 25.8 1.1 3 23 1839 1859 1838 1859 0.98

20 23 0.0025 0.22 13.0 0.4 3 23 1878 1898 1876 1899 0.93

21 23 0.22 19 6.8 0.0 1 23 1921 1943 1921 1943 0.97

22 23 0.033 2.9 9.4 0.6 1 23 1949 1972 1949 1972 0.95

23 23 0.00017 0.015 16.6 0.5 1 23 1980 2003 1980 2003 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0058	0.5	11.8	1.0	3	23	620	641	619	641	0.96
2	23	0.41	36	6.0	0.3	1	22	1031	1052	1031	1052	0.95
3	23	8.1	7e+02	1.9	0.3	1	22	1094	1115	1094	1117	0.82
4	23	0.024	2.1	9.9	0.7	3	21	1128	1146	1126	1147	0.94
5	23	0.31	27	6.4	0.2	2	23	1155	1177	1154	1177	0.89
6	23	0.0053	0.46	11.9	0.1	3	23	1198	1219	1196	1219	0.96
7	23	0.0033	0.29	12.6	1.7	1	23	1225	1248	1225	1248	0.95
8	23	0.15	13	7.4	0.0	1	23	1273	1296	1273	1296	0.90
9	23	0.023	2	10.0	3.4	1	23	1301	1323	1301	1323	0.97
10	23	0.013	1.1	10.7	0.2	1	23	1329	1352	1329	1352	0.95
11	23	0.0028	0.24	12.8	1.3	1	23	1368	1390	1368	1390	0.97
12	23	0.00021	0.019	16.3	1.8	1	23	1438	1461	1438	1461	0.97
13	23	0.0014	0.12	13.7	1.6	1	23	1522	1545	1522	1545	0.96
14	23	0.0013	0.12	13.8	2.1	2	23	1570	1592	1569	1592	0.95
15	23	0.1	9.1	7.9	0.1	2	23	1598	1620	1597	1620	0.93
16	23	0.012	1	10.8	0.2	1	21	1665	1685	1665	1686	0.95
17	23	0.0015	0.13	13.7	0.6	1	23	1696	1718	1696	1718	0.93
18	23	0.00013	0.012	17.0	0.3	2	23	1810	1832	1810	1832	0.93
19	23	2.1e-07	1.9e-05	25.8	1.1	3	23	1839	1859	1838	1859	0.98
20	23	0.0025	0.22	13.0	0.4	3	23	1878	1898	1876	1899	0.93
21	23	0.22	19	6.8	0.0	1	23	1921	1943	1921	1943	0.97
22	23	0.033	2.9	9.4	0.6	1	23	1949	1972	1949	1972	0.95
23	23	0.00017	0.015	16.6	0.5	1	23	1980	2003	1980	2003	0.97

Sequence Information

Coding Sequence: atgAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTCCCTACCACCAGTTCGGATGACTCGGATCCTCCCGTCCTCGCGACGAAAATCAAGGATTGTGTTTCTGTTCAGataagcGAAAATGACGACTTGCCAACGAAAGTCTGCAGAAAATGCATGGACAATGTAAATAACTGGCACATATTTAAGTCAGTATGTGAAAGGACACAAAACAAACTAGAATCTCTGATAAAAAAAGATGGCAACCAACTAGAAGAGGTGAAAATCAAAAGTGAGCCACTCTGTGATGAGGTATATGATGATGGAGTGGTCATTGATGGGTCATACCCTGATGGTGAGAATGCTGGAAATTCTACCAAAATACAGCCAGAAGGCCCACCAATCTTGGCTTCGTTGGGGCTCACACCCAGGAGTGATAAGAAATATATAGATCCTCGAATGGACTGGTCTCGGGTCCATGCAATCTTGGACATGGTGCAAGAAGATGATGTCATAGATTCCTTGCAGGACACAGAGGAGAGTGACATCATACATCATTCAGATCACGACTCTGACTCAGAGATTGACCTCAAATCTGACATTGCTGACATGTATGTTGATTGCAAGTCCGGATATATGTGCAAAGATGAAGAGGTACTGTCTAGAACTCCAAGATATTCTCTTGCCAATagagtaaataaaatgaaagaaGTTAGCATTATGAGAAAACGCAAACATGAGCGGCCCCCGTTCTGTCCTCAACCTAAGGTGGCCTGGCAAAAATTTTTCTCAGAGGATCTCTTAGAACTGATTGTGATGTCAACAAATTACACTATAGAAAAACGTGAACTCGATACTTCGTTATGCACAAATATTACTGAATTAAAAACCTTGATTGGTATATTGTACCTGCATGGTATTCTACGACCGACACATCAGAAATTCAGTGACCTTTGGAATAAAGATTGTGGTGTTCCATGTATTAGAAGTGCAATGAAGTATGAGCGTGTAAAATTTCTCCTCGGAAATATTTGCTTTGATAAGGATGCGGATGAAGACATAATGCAGTTTGATATCATGAGACGAATGAGGAAAGTCTTTGAAATCTTTGCTATGAATTGCAGAACAGCATACAATGCAACTGGAAATGTTGCAGTTATTGATGAAATCCTTGTGCCAGTTAACGGTCCCTGCCCATTTAGATACAGCATTGATAGGAAACCATTGAAAAATGGAATGAAGCTGGTTTTATTAGTTGATCCATTAACATTCTTCGTAAATAATTTGGATGTTATAACTGATCCTTATTTCGAGTCCGTTGAGATTGCAAAGAAACTGGTTCAACACCTAGCTGGTACTGGGAAGACAATTATTATGGACAACTGGTATATGTCAATGCCATTGCTTTATTATTTGAAGAATGAATATCAGTTATTCACCTTAGCAGCTATCAGTCCTAAGGATGATATGATACCACCATTGTTTTTGTCCAAGTATAGAAAACATCAGAGATTATTGACTGCTTTTAAGGATGAGGATATAATACTCACATCCTTTGTTAATAAGGACTCTAAGGCAATAAATATTGTGACAAATGAGCCGCAGTATAATAGAAAAGGACATACCCAGTTGACAAGTGCTGCCTCCaattatttaaagtttaaatcAGCGGTGGAAGGTGTGGACAGTGAAAAAGAggaagaggaagaagaagacgaAGAGATGAATGAATCGGGTCGGTCTTTCTCTAACGTGCCGGCCATGCCCGAGGTGTCCATCACCGTGATGCGGCCCTCGGGAGAGACGCTGCAATCGCGGCAGGGCATCCAGGCGCTCGCTTCCAAGGACTGCCTCGTCTGCGGCCGCTCCTACCGATACTCACACAACGCCCGCAGACACGAGCTCACCGCACATAACTTCGACAGGTACACTAACAAAGTAACCAACAAAAAGTCTTTTGCACATATGCAACCAAAACTCAGACCTAACCCCTTCAACCCCAAAGCCCGGTTAATGCCGAGCCACAAAATGCACCTCATACCTAAACCGGTACCCAAATTGATGCCTCACAAAGTAATCAACCCACCACAACCGGTTCTCATTAAAAAAGGACCGCAAAACAATTTACCTTATCCGTTGCGTATCAAGGCGTTAAAGGAtttacaaataaagaaaaaggaaCCGCAGATGCTCAAAACTTTACTGACGTCGAAACCCGAAGTTTTGACCTCTGAGATTGACATTGCTAATTCAGAGCCGGAAAGTCCTGAAACTTTGATATCTGAACCTGAAATTGCTTCTTTCCAAGTAGAAACTATACTATCTGAGCCTGATGCTTTTGATCCCCCACCGCTTGAAGACGACGGTGAAGGGGAAGGTGACGGCGAAACGGAAGAAAATGATCAAAGTCAGCATTATGATACAGTTGATATGGACTCtgaaaatgaaattgaaattgctAGACAGCAAGAAAATGAGGTGGAGGAAGAATACCACAATGTTGATAATGAGAACGAGGACAACATGCAGcaagatgatgataataatgtagAGGAGGCTCAAAGCGAGCCTGAAAAAGAGCATAATGAGGAAAATGGTGAACTTGAAGAAAATGCAGAAAAAATGGATGCTGGTGATATAGATAAAATGGAAGTAGAGGAAGAGTCCAAAGAGGAAAAATTAGATGTTGAAGAAGAGGATGCCCGAGAACATGACGAACAAGATGTTAAACACGTAGAAAATGAAAATGAGGAGGATGATGAAGACATGCCCCCTATGGGCTTGGCGCCGGTCGTAGAGATCAATGAGGACATGCAAACCAATTCATACAACAGTGAAGTAAATGAAGAGGAGGAAGAAATAGATGAGACTGCTGATCTCAACGATACTGAAGAAGAACCAGTCAAAGAGCTAGACCCAAACAAAATTTATGTCACCAAAACGCAAAGagattttattgttaaattCAAGGACATTATTCAACAGATTAATACGAAAGTATGTCTTTGTTGTGACCGCGAACATCCGCGTCGAAAGGCAGTCATACAACATTTGCAGAAAAATGGACATAAAGTCCCGAAACATACATGTTACAATTGTGTGGTTACCTTTGGACACATTGGTGCTCTACTCAGTCACATGAGGTCTAACAGTTGCACAGATTTGTGGAAGGTTATTTACAACGAAAATGGCATTACAGATGAAATGGTTTTAGATGACGAACCCAAGGAAGCTAAAGTTCAATATAAAGACATATTCAATGCAAGGTCTTACGCTTGCAAATTATGTCCAGCGAAATTCCAACTCAAGCAGTTTATTATGAAACATGTGCTAGATGTGCACGAGGACGGCCAGTCTCGGGTTCCAATGATTTGCGTCCATTGCGGATCTCGATTTAAAGAAAAGAGCCTAATAAAAAAGCATATACGTAATGGAGACTGCACAGTGTATATTTCTTGTGACTTATGCTCGGAGAAATTCTCCAATATGCAAACATTCAATGACCACGCGTTGGCCGTACACGCCGGGAATTTCGACCAGTCTGACAATCAGAATAAGTGTGTTGATGGCCGTCTCACTGATTGTCCAATTTGCGGAAAGAAGAATAGCAATTATCCTAACCTGGTAAAACATTTAAAGATCATACACAATGAAGAAAAACCTCATTATTGCAAACATTGTGACGCCAAATTCGAGCAAATTGCTGATCTGAATCAGCATATTTATATGGGGCATTCAGATAGGGGTATGAGTATCACTAGCGACCCTGACATGTCGCTCGTGAAGGAAGAAGCAGAAGAATACCACTATTCTTGTACAGAATGCAATGCCATATTTGAGACAGTTGACGCATGGACAGACCATCAAGTGGCTGAACATAACCAAGTCGCTCATCATTGCGACCAGTGTGAAAAGAAGTTCTTGCGACCGTCCGAACTAGCCGAACACAAAAATACCCACTTGCGTGTGAAATTCTACCCGTGCAACGTGTGCACCAACTCTTACAGCACCCCACAGAAGCTGTCTGAACACGTACAACAAGCTCACCCAGGAGCCGGAACTGGAGGATCATTCCCTACTTTGGAGACTGAATTCTTCTGCGATATTTGTATAAGATCCTTCAAGAGTCGCCAAGCGTACTCTAACCATATGCGTATACACGCAAAAGTACCCACCACAAACAGGAAACCAGGAGATCCAAAAGGTTTCTCACCTCAAATTATCGGGAAACCTATCAAACAGTTCCCAACTATTCAGCCGAACTTCGTCTATAAGCCAAATCTAAATGTTCCTAACGCTCCCTACTCCTGTGATATTTGTGGCAAAGGCTTTATGCACAAGAAGAATATCTGGAAACATAAGAAGGTGTTACATGCGGATATTATCAATGACAGGAATGACAGCGAAGAAAATACTATGCAAGCTTCAACCGAGGAAGATGATTATAATGTAGACGAAAATGGAGCCCTTTTGTCGACACCACAGTTTAACAGCTTTAACTTTGCGAACTTCACTAACAATGTTCAGCAAACACCACAGGAGGATCCAATGCCTTACTCGTGCGATCTTTGTTTCAAACGATTTCCGCTTAGATCTAGTTTGTGGAAACACAAACGTGCTAAACATGGAATCATTAACGCCAGCGCCGGCGGTGAACCTGTTGCCCAGAACTCGACGGGCGAGGGCAGCAGCAGGTCGAGTTgcacaatttgtaaaataacatTCTCTGATAAGAAATCATACTACCGCCATAGAAAGAACGTGCACAAGTCGGCGACACAAATGTGTAAAATATGCGGCAAGCCACTCAATTCAACGTTAGAACTTTATGAGCACTTGAAAGCTGCTCACGCTCGCGAACTATTGGGCTACAACGCCAGTCAGGGGGCCAGCAGTAAGTCTCAGGAAATGAAACAGGAACTGGAAGTAGACTACGAGAACGATCAAGATTCGATCGACCCTTCGGTAGACTACCAAGCTCGCTATCCCTGCGACACGTGTGGCAAGCAATTTGTCGGATTACTGGCATTGCAGAACCATCAGTGTATAAATCAAGTTCAATCACAGCCGCAGACCTTCGACTGTGAGATCTGCCACAAGAGTTACACGTCTATCGCGGCGCTGAAGAGCCACCGCGGCTGGCACTTGCGTTCACCCGACGGCAAAGCGGCTGCCAATAACTCCGGTTTGTGGATGCCGCAAAACAAAGTGACGAGTAAAGTCAGTAAACACGAGGTGTTAGATCCCGTACAGCTAGCGCGCGCCACACTCCCCACCACATCCACGCCAGCAGCTACGGTCGCTGCCAAGCGGAGGCTGCCCCCCGAAGTAGAAGTCACTGTAGTGAATCCCAATAAGAAAATGCGGTCCGATGACTCCATAGAACTAGAACAGCAAACTGGCGCATTAGAGGACAGATATTGTACGATTTGCGACAAAGAGTTTACGAAGCGGGCGGCGTACCAACGCCACATGGACGAGGTCCACCAACCTAACTCAGTGTTTTGTCCCGTATGCGATAAGAGTTTTACTAGGAAATCTACTTTGATCGTACACATGAAGAAGCATTACGAGGGCGGACAAGGCAGTTCTACTGGTACGCTAGTGGAGGAGGAGACCGCGTGCGATGTTTGCGGCACTCAGTTCGACAGTGAGAGTGCGTTGCGAGCGCACAAAGTGCGTCATCACGGTGAAGAAGAGTCGGAAGAATCGGAAGATGAGGGgagcgtccctttcccgcagcCCGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGTGTGGCAACGCCGCGCGATTTGATCGCTCACAGGACGATGCACGCGACCCCTACTAAATTCTTCTGCAACATTTGTAAAGTGTACTTCGCACGAGCGTTGGATCTCTCGTCGCACACGCGGGCGCGACACGCCGACAACGAAAAGGTGTTCTTCCCTTGTGCCATGTGCGACCGGTTCTACATGAACAAGAAGAGTTTGCAGCGGCACATCGAGACGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSDPPVLATKIKDCVSVQISENDDLPTKVCRKCMDNVNNWHIFKSVCERTQNKLESLIKKDGNQLEEVKIKSEPLCDEVYDDGVVIDGSYPDGENAGNSTKIQPEGPPILASLGLTPRSDKKYIDPRMDWSRVHAILDMVQEDDVIDSLQDTEESDIIHHSDHDSDSEIDLKSDIADMYVDCKSGYMCKDEEVLSRTPRYSLANRVNKMKEVSIMRKRKHERPPFCPQPKVAWQKFFSEDLLELIVMSTNYTIEKRELDTSLCTNITELKTLIGILYLHGILRPTHQKFSDLWNKDCGVPCIRSAMKYERVKFLLGNICFDKDADEDIMQFDIMRRMRKVFEIFAMNCRTAYNATGNVAVIDEILVPVNGPCPFRYSIDRKPLKNGMKLVLLVDPLTFFVNNLDVITDPYFESVEIAKKLVQHLAGTGKTIIMDNWYMSMPLLYYLKNEYQLFTLAAISPKDDMIPPLFLSKYRKHQRLLTAFKDEDIILTSFVNKDSKAINIVTNEPQYNRKGHTQLTSAASNYLKFKSAVEGVDSEKEEEEEEDEEMNESGRSFSNVPAMPEVSITVMRPSGETLQSRQGIQALASKDCLVCGRSYRYSHNARRHELTAHNFDRYTNKVTNKKSFAHMQPKLRPNPFNPKARLMPSHKMHLIPKPVPKLMPHKVINPPQPVLIKKGPQNNLPYPLRIKALKDLQIKKKEPQMLKTLLTSKPEVLTSEIDIANSEPESPETLISEPEIASFQVETILSEPDAFDPPPLEDDGEGEGDGETEENDQSQHYDTVDMDSENEIEIARQQENEVEEEYHNVDNENEDNMQQDDDNNVEEAQSEPEKEHNEENGELEENAEKMDAGDIDKMEVEEESKEEKLDVEEEDAREHDEQDVKHVENENEEDDEDMPPMGLAPVVEINEDMQTNSYNSEVNEEEEEIDETADLNDTEEEPVKELDPNKIYVTKTQRDFIVKFKDIIQQINTKVCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKVIYNENGITDEMVLDDEPKEAKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMICVHCGSRFKEKSLIKKHIRNGDCTVYISCDLCSEKFSNMQTFNDHALAVHAGNFDQSDNQNKCVDGRLTDCPICGKKNSNYPNLVKHLKIIHNEEKPHYCKHCDAKFEQIADLNQHIYMGHSDRGMSITSDPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNVCTNSYSTPQKLSEHVQQAHPGAGTGGSFPTLETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFSPQIIGKPIKQFPTIQPNFVYKPNLNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMQASTEEDDYNVDENGALLSTPQFNSFNFANFTNNVQQTPQEDPMPYSCDLCFKRFPLRSSLWKHKRAKHGIINASAGGEPVAQNSTGEGSSRSSCTICKITFSDKKSYYRHRKNVHKSATQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQGASSKSQEMKQELEVDYENDQDSIDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVLDPVQLARATLPTTSTPAATVAAKRRLPPEVEVTVVNPNKKMRSDDSIELEQQTGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGQGSSTGTLVEEETACDVCGTQFDSESALRAHKVRHHGEEESEESEDEGSVPFPQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIETAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00012228;
90% Identity: iTF_00012228;
80% Identity: -