Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_963576875.1
Location
OY756234.1:8390909-8420066[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-14 4.4e-11 43.6 0.1 3 44 600 641 598 643 0.95

Sequence Information

Coding Sequence
ATGACGACTATATGTCCTAAAAAGGACGGAGGCCCAAATGTGGAGTTTTTCCAATCACCAGAATCGTTGGCTCAGTTTGACCAAATACGTGTTTGGTTGCAGAAAAATTGCAAAAAGcATGTACAAACTGACCCACCAACCAAGGAAGGTTTGGCACAGCTAGTGGTGCAACTCATCCAGTACCAAGAGAACAAACTGGGGAAGAATGCTGCTGATCCACCATTTATTCGGCTTCCAATGAAAGTGTTCATGGACATGAAGCCTGGCGGGTCTCTGTGCACCGTGCTCGCCACCATGTTCCGCTTCAAATCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCCCGCAAGGATCTAAACGTACAGATGATGATGGAGATCGAGTCCTCGCTCAACAGCGCCGAGGTGGTCCGCACGCCCTGCGTCTACATTCGCCCGGAAGTGGACAAGGGCACCGTCAACAAGATCAAGGAGATTGTGGGACAACATGGGGACATTTGCGAGGATGAAGAGGACGCAACACACATCATTTACCCGACTGTGGACCCTTTGGAAGAGGAGTACGCCCGGCCGGTGTTCCGGCGCGGCAACCACGTGCTGGTGCACTGGTACTACATGCCCGACAGCCACGACACGTGGGCGCAGGCTGACTTGCCGGTTGAGGTGCCTGAGAGTGCGAACTGGGAATGTGTGCGGTCCGAGCCGTGGAGGGTGTCGGCGTCGTGGGTGCTGGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTGGACGCCAACGGAAAGAAGAAGGTGCACAAGCTGCGTCTGTCCGTGGACGAGCTGCTGCCGGGCGCGGAGCCGGCGGGCAAGGGCAAGAAGGCGGGCAAGAGGAAGCGCTCGCCTTCCCCGCCGCCCACCAAGCATAACAAGCGCAAGAGCCGGATAACTAAACGTCGTGAGAACGATGCTGAGGATGAAGAAGATAATGCATCGAGAGACAATACGGACGCTGCCCCGGCGCCCGAAAGCGAGAAGGCGGCTGAAACCGCACCGACGCCGGCCCCCGAGCCGGCCCCGGCCCCGGCCCCGGCCAGCGAGGCGCCCGCCACGCCCGCGCCGCCCATGGACGCTCACGACGACTCGCAGGGCAAGCACTCCGACTCCAACACGCAGGAAATGTTGATAAAGGAGGAGCTAGAGGACAACGTGACGGACCAAACGCACCACATCGTGGTCCCGTCGTACTCGGCGTGGTTCGACTACAACTCCATACACACCATCGAGAAGCGAGCGCTGCCAGAGTTCTTCAACGGCAAGAACAAATCCAAAACGCCTGAGATATACTTGGCTTACAGAAACTTTATGCTGGACACGTACCGTCTGAACCCGACGGAGTATCTGACGTCGACCGCGAGTCGCCGCAATCTCGCCGGGGACGTTTGCGCCATCATGCGAGTACACGGCTTCCTTGAGCAGTGGGGACTTATCAACTACCAGATTGAGGCCGAGTCTCGTCCAACAGCGATGGGTCCGCCGCCCACGTCCCACTTTCACGTGCTCTCCGACACACCTTCCGGCCTGCAGCCTCTCGTGGCTAGGCGACCAGtGGAGAACGCAGCCGTGCCTAAAGTGGAGGCCGGTCTGCCAAACGGCACCGAAGCTGTGGCTGCTCCTGGGCTGGCAGTACCGCCCACAGTCCCGCCGACGGTCAAACCCGAGCCCAACCTCGAGCTGGGAACCGAACCAGGCCTCAAGCTCGACCAGTACCGCGGCAGCGGCGGTCGCGGGCGCGAGTGGACGGAGCAGGAGAGCCTGCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGGCTGCCCATCGAGGAGCCCTACCTGCAGGACAGCGCTTCTGGTGGAGTGCTAGGCCCGCTGGCGTACCAGCCCGTGCCGTTCAGCAAGGCCGGCAACCCCGTCATGAGCACCGTGGCGTTCCTCGCGTCCGTCGTGGACCCGCGCATCGCGTCCAAGGCGACCCGAGCCGCCATGGACGAGTTTGCTGCGATCAAGGACGAGGTGCCGGCGGCCATGATGGAGGCGCACGTGAAGGCGGCGGCCGAGCACGGCGCCGCGGCCGCGCTCGCCGCCACCGGCATCGCCGGCACGGCGCCCAACCCGGACCCCAACAAACCCGAGAAGAAGGAGGGTGTAGAAGTAAAGAGTGAACCCATGGAGGTGGAAGAGAGTGCCGACGCGCAGAAGCTAAAGGAAGAGCCGGCGGAGGCCGCGCCCGAAGACAAGGACGCGGAGAAGACGGCTGACGCGCAGCCAAGGGCGGAGGAGGCACCGGCCACCGTGGACGCTAAGCTGCAGTCAGCGGCGGCGGCAGCTCTGGCTGCGGCTGCCGTGAAGGCGAAGCATCTCGCTGGGGTAGAAGAGAGGAAGATCAAGTCTTTGGTGGCGTTGCTGGTGGAGACACAGATGAAGAAATTGGAGATCAAGCTGAGGCACTTTGAGGAGCTCGAGGCGACTATGGAGCGCGAGAGAGAAGGGTTGGAGTACCAGCGACAGCAGCTCATCCAGGAACGACAACAGTTTCACTTAGAACAGCTGAAGGCGGCCGAATTCAGGGCGAGGCATCAAGCACATCAgagACTGCAGGCGGAGAGCGGCGCGGGCGGGGCGGCGGGCGAGCAGCCGGCGCCCGACGCGGCGCCGCCCGTGCCGCCCGCGCACGCCTAG
Protein Sequence
MTTICPKKDGGPNVEFFQSPESLAQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVVQLIQYQENKLGKNAADPPFIRLPMKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLNSAEVVRTPCVYIRPEVDKGTVNKIKEIVGQHGDICEDEEDATHIIYPTVDPLEEEYARPVFRRGNHVLVHWYYMPDSHDTWAQADLPVEVPESANWECVRSEPWRVSASWVLDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDELLPGAEPAGKGKKAGKRKRSPSPPPTKHNKRKSRITKRRENDAEDEEDNASRDNTDAAPAPESEKAAETAPTPAPEPAPAPAPASEAPATPAPPMDAHDDSQGKHSDSNTQEMLIKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMLDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQIEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVARRPVENAAVPKVEAGLPNGTEAVAAPGLAVPPTVPPTVKPEPNLELGTEPGLKLDQYRGSGGRGREWTEQESLLLLEGLELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLQDSASGGVLGPLAYQPVPFSKAGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAAEHGAAAALAATGIAGTAPNPDPNKPEKKEGVEVKSEPMEVEESADAQKLKEEPAEAAPEDKDAEKTADAQPRAEEAPATVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGAGGAAGEQPAPDAAPPVPPAHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00040769;
90% Identity
iTF_00146379;
80% Identity
-