Basic Information

Insect: Acrobasis consociella
Gene Symbol: -
Assembly: GCA_963555685.1
Location: OY743132.1:7885712-7904138[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0036 0.3 12.6 0.3 2 23 308 329 307 329 0.97

2 12 9.7e-05 0.0082 17.5 1.0 1 20 336 355 336 358 0.95

3 12 0.00017 0.015 16.7 1.1 1 23 389 412 389 412 0.97

4 12 1.8 1.5e+02 4.0 0.3 1 23 416 439 416 439 0.79

5 12 0.23 19 6.9 0.0 2 20 452 470 452 472 0.91

6 12 0.31 26 6.5 1.0 2 23 508 530 507 530 0.95

7 12 0.0029 0.25 12.8 0.6 2 23 549 570 548 570 0.96

8 12 0.0016 0.13 13.7 5.3 1 23 576 598 576 598 0.97

9 12 1.6e-05 0.0014 19.9 0.1 1 19 605 623 605 625 0.96

10 12 2.9 2.5e+02 3.4 2.1 6 23 626 643 624 643 0.96

11 12 0.00039 0.033 15.6 0.2 1 23 650 672 650 672 0.97

12 12 3.4e-05 0.0029 18.9 1.3 1 23 678 701 678 701 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0036	0.3	12.6	0.3	2	23	308	329	307	329	0.97
2	12	9.7e-05	0.0082	17.5	1.0	1	20	336	355	336	358	0.95
3	12	0.00017	0.015	16.7	1.1	1	23	389	412	389	412	0.97
4	12	1.8	1.5e+02	4.0	0.3	1	23	416	439	416	439	0.79
5	12	0.23	19	6.9	0.0	2	20	452	470	452	472	0.91
6	12	0.31	26	6.5	1.0	2	23	508	530	507	530	0.95
7	12	0.0029	0.25	12.8	0.6	2	23	549	570	548	570	0.96
8	12	0.0016	0.13	13.7	5.3	1	23	576	598	576	598	0.97
9	12	1.6e-05	0.0014	19.9	0.1	1	19	605	623	605	625	0.96
10	12	2.9	2.5e+02	3.4	2.1	6	23	626	643	624	643	0.96
11	12	0.00039	0.033	15.6	0.2	1	23	650	672	650	672	0.97
12	12	3.4e-05	0.0029	18.9	1.3	1	23	678	701	678	701	0.95

Sequence Information

Coding Sequence: ATGCAGTGTGCGGTGATCGGGTGTTCCAATCAATCTACAAATGAAGCTGAAGATATATCTTTCTACCCtttgccCAAAGATGTGAAGTCGAGAGAGAAGTGGCTGAAGATAATAGATGAGAGTAAAGTAACTAGCGATACGCGTGTATGTGCAAATCACTTTACCGGTAGAGACTTCCTTTCTTCCGGAAAGCTAAGGAAGTATGCGGTACCAGAGATGGTACAGCCTTGCAGAATATGTTTAACAGTTggtataaaaatgtatgactTGATGGAAGATGACTTAAACAGGGCTTATGAAGAAGTAACTGGCCTTTTgCTGTGGCATTCCTGCCCCCAGCTCCCTGAGAAGCTGTGCTGGGAGTGCGCGCACCGCTTGCGCTCCAGCTGGAAGTTCAGAGACAAGGCGCGCCGCAGCCACGACTTGCTGACTGAGCTGGCGACCTCTCACACATATATAACCACTGACAACATTTTGACCATAGACCGTATAGAGCACAACCTAACAAGCACACTAGTACACAAACACAACCTAGAAAACTCTGTCATAGATTTCGACACGATACCTGATGAAAAACCACCGATATATCTAGAAATAGACTTAAAAGATGAAGAAGGAATAAAGAGTGAAGAAGAAACATATTTAAAAGATGAAATCAATCGTTCGGATGATGAAAGAAGTGTGTCTCCAGAATTATTTAATCAAGAGAATATAATAGTAGAAACAACAGAGGTTGAGAAAGAGAAACGGAAGTTAAAAAAgaggaaattaaaaaatgagAAAGCGAAGAAAGAAGTTTCTAGAAAGCAGAAGATGAGTTTAGATGAGAATTTGTTTAAGATAACAAGTCTTACTGTTGAAGAGCAACATTATGAGGTACAGAAGAGGCAAGAGTCGGCCAAGTTCAGGAATGCGAGGCTAAAGTGTACCATTTGCTTCAAAGTGTTCGCAGAGGAAGATTCGAGGGCTACGCATATGATCAGGCATTCAGATaaatCAGGTTCATTCGAATGTGACATTTGCCATCTCCGCTTCAAGACGCAGCGCGAGCTGAAGTCCCACATTCCGGGGCACATGAAGAAGTTCCACTGCACCGCGTGTCCGTACGTCACGATGAGCATCAATGCAGCGAGAAATCACGAGAAATACCACAAAGGCACCGTGTACAACTGTCCGCACTGCGGGGAGATGTTCGACAAGGTGTCGACGTACATGAGCCACGTCCGCATCAAGCACCCCTCGGAGTTCGTGTGCGAGCTGTGCGGGAACTCCTTCCTCAACGAGAAGGGGGTCGCCATGCACAAGAAGCTCAAACACCGCTTTGATGACGTCACGGTTCCGCCGGACGGCCCGCGTTGCGAGCCGTGCGACATCCGCTTCCAGAGTGCGGAGGCGCTGAACAAGCACCTCGAACTGTCTCCAAAGCACAGGCCTCCGGACAATAAGGCTCAGCGGCCGCCGCGCGGGCCTAACAGGATACGGTACCCAGCTGAAGAAAACGATTTCGTTGCGGGACCCATCCACTGCGAACAGTGCGACGAAAAGCTACCGAACGCAAAGTTGTACTTCCTCCACTTCCGGCGAGAGCATCCGGACAAAAACCGGACCAACTTCCCGTCCGGGAACCGGCACCGGAGCAAGTCCATGTGCGAGGTCTGCGGCAAAATGTTCCAGAGTCTAGCGCTCCTACTTGACCACAGCCACACGCACACCGCCAAGAAGCAGTTCTCGTGCGAGCAGTGCCACAAGCGCTTTCAGCGCAAATACCGGCTCGTGCAACATCTCAAGCTGCACGCTGACGTGAGGAAGACGTACGCGTGCCCGGAGTGCGGGAAGCGGCTCAGCACCAGCTCTAACCTGGCCAGGCATGCTTTTTGCCACAAGCGCTCCCAGCGCAAATACCGGCTCGTGCAACATCTGAAGCTGCACGCTGACGTGAGGAAGACGTACGCGTGCGCGGAGTGCGCGAAGCGGCTCAGCACCAGCTCTAACCTGGCCAGGCATGCTTTTACGCACACCGGCCTGAAGCCGTTCAAGTGCGAGATGTGCGGGAAGAGCTTCAAGTTCTCGAGCCAGAAGCGCGAGCACATCGCGTACGTGCACATGAAGAAGCCGTGGCCGAAGCGGGCGCGCGGGGAGCGGAGAGCGGTACACGCGCAGGAGGCAAGCGACGACGACCAACAGCAGATATGGCCGCCGTGCGagtaa
Protein Sequence: MQCAVIGCSNQSTNEAEDISFYPLPKDVKSREKWLKIIDESKVTSDTRVCANHFTGRDFLSSGKLRKYAVPEMVQPCRICLTVGIKMYDLMEDDLNRAYEEVTGLLLWHSCPQLPEKLCWECAHRLRSSWKFRDKARRSHDLLTELATSHTYITTDNILTIDRIEHNLTSTLVHKHNLENSVIDFDTIPDEKPPIYLEIDLKDEEGIKSEEETYLKDEINRSDDERSVSPELFNQENIIVETTEVEKEKRKLKKRKLKNEKAKKEVSRKQKMSLDENLFKITSLTVEEQHYEVQKRQESAKFRNARLKCTICFKVFAEEDSRATHMIRHSDKSGSFECDICHLRFKTQRELKSHIPGHMKKFHCTACPYVTMSINAARNHEKYHKGTVYNCPHCGEMFDKVSTYMSHVRIKHPSEFVCELCGNSFLNEKGVAMHKKLKHRFDDVTVPPDGPRCEPCDIRFQSAEALNKHLELSPKHRPPDNKAQRPPRGPNRIRYPAEENDFVAGPIHCEQCDEKLPNAKLYFLHFRREHPDKNRTNFPSGNRHRSKSMCEVCGKMFQSLALLLDHSHTHTAKKQFSCEQCHKRFQRKYRLVQHLKLHADVRKTYACPECGKRLSTSSNLARHAFCHKRSQRKYRLVQHLKLHADVRKTYACAECAKRLSTSSNLARHAFTHTGLKPFKCEMCGKSFKFSSQKREHIAYVHMKKPWPKRARGERRAVHAQEASDDDQQQIWPPCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00013445;
90% Identity: iTF_00012081;
80% Identity: iTF_00012081;