Acon030540.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acrobasis consociella
Gene Symbol
-
Assembly
GCA_963555685.1
Location
OY743132.1:9784731-9819192[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0013 0.11 14.0 7.4 1 23 225 247 225 247 0.98
2 21 0.002 0.17 13.4 6.7 1 23 253 275 253 275 0.98
3 21 0.00039 0.033 15.6 4.3 1 23 281 303 281 303 0.98
4 21 0.0012 0.1 14.0 3.1 1 23 309 331 309 331 0.98
5 21 2.6e-06 0.00022 22.4 1.1 1 23 337 359 337 359 0.99
6 21 0.00061 0.052 15.0 4.6 1 23 365 387 365 387 0.99
7 21 5.1e-05 0.0043 18.4 0.9 1 23 393 415 393 415 0.98
8 21 0.00016 0.013 16.8 0.9 2 23 653 675 652 675 0.95
9 21 0.0024 0.2 13.1 2.1 1 23 681 703 681 703 0.98
10 21 1.4 1.2e+02 4.4 4.5 1 23 707 729 707 729 0.97
11 21 0.62 53 5.5 2.5 1 23 734 757 734 757 0.95
12 21 0.98 83 4.9 0.3 3 20 764 781 764 785 0.78
13 21 0.0073 0.62 11.6 0.1 1 21 792 812 792 813 0.95
14 21 2 1.7e+02 3.9 0.0 3 23 821 842 820 842 0.93
15 21 0.0015 0.13 13.7 0.1 3 20 851 868 849 870 0.94
16 21 0.087 7.4 8.2 0.0 2 23 876 898 875 898 0.89
17 21 8e-05 0.0068 17.7 2.0 1 23 906 929 906 929 0.95
18 21 0.14 12 7.5 0.5 2 23 984 1005 984 1005 0.95
19 21 1.5e-05 0.0013 20.0 0.2 1 23 1011 1033 1011 1033 0.99
20 21 0.00042 0.036 15.5 0.1 1 23 1039 1061 1039 1061 0.97
21 21 0.0013 0.11 14.0 2.3 1 23 1067 1090 1067 1090 0.94

Sequence Information

Coding Sequence
ATGGCCCAAGATGATGAACCAGTCCATTTAGTTTCCAACGAGGATATAAAGAAAGAGATTGAAGACTCCGTAGACTCTATACCGTCGCAGGAATGTGTTGTATGCGTGAAAATAAGCTGCGAAAATTCCGACATCTTTGCTACTTACACTGAAACTTCCGGCAGACTTATACACAGTTTTCTTAGCAAATTTTCAAACACAGAACTCCCTTTCTGTCCAAACTTGACCAAATACATCTGCAGTGCCTGTTTGACTCTAATCAATGTTTTGGACGAAGCAGAGACTGCATATCTGAAAGTAAAACATGATTTTGAGTTGATTATTCGACGAAACCCTCTGTTTCAACTGCCTGGAGGTCAATGTTTTAAGGAGGAGGGAGACGGTTCAGACAGTGAAATGCTGGTTAAAGATGAAGATCCAATGCCTGAAGATTTCGTACAGTGTCAGATGAAAATCGAGGATGTCAAGGAAGAAGATGAGAGAGAAAGTAGCAATACGATCAACAAGATTGTAAAACTGGAACTAACTGAAGAAAACATCAGTTCGGAGACAGCAGAGTGTGTGGGAGAGGGAGCGACTGTGACTGGTAGACTGCAGGCCAAAGATGCCAGTAAAGCTGAAAAACTTGAGAAAAGACGCAGGAGAAGACGCGAAACTGCGGTCGAGCGACAACACGAGTGCTCCGTCTGCCAGCGGCGGTTCAACCTCAAACACCACTTAAAGGACCACATGAAGATCCACACTGGAGAGAAAGCACACGAATGCCACGTCTGCGCGTACAGATGCAGCCGAAAAGACGACTTTGCCAGGCATTTAAGAACCCACACCGGCGAGAAACCATTCGAATGCACCGTTTGCCAGagtaaattcacccttaaaagcCATCTTCGAGAACATACAAGGACCCACAcaggtgagaaaccatacgaatgtgaAATATGCCAACGCCGATTCAACTACAGACACGTCTTGAAAAGTCATTCAAGGATACACACAAGCGAGAAACCGTTTGAATGTCCGATTTGTCAAAGAAGGTTTAATAGGAAAACTAGTTTAGATGAGCATTTGAGGACGCATACGGGTGAGAAACCCTACGAGTGTGAGCTTTGTTGTAAGCGGTATAATCAGAAGAGCAATCTATTAAAACATCTTAAGACTCACTCGATGGCAAAGATGTTTGTGTGCCAAGTATGTGAGAAGGagttctattatgaatatgagtTGAGGCAGCATTTGCAGACGCATAGTGAGGACCGTACGCAGAACACAATAATGTCGACGACAACTGTTGCCCTGTGTCGAGGATGTCTGTCTTCCAGCTGTAAACTGTATAATATTCACAAAATTGGACTAACGAGGAGCTATGTTGAACTTGTTGGAAATTCGCTCGAGGACCCGCACACCAAGCTGCTGTGCAGCATCTGCGCAGTGCTGCTGCAGAAGTTCTCCGCGTTCCGGGAACGCTGCCAGAAGACCTACAACTTGTTGGTTGCCGCTGAATTCCATGGGAAATGTttagaTGACGTAGATATCTCCACGTACATGGGCCAGCTCCCATACGCGAAGTCCGTAGTACAAACGCTCGAGTACACAGACACATTTGAAGAAGAAGACACATTAGAAGAGAAAATCGAAGTTTTCGATCTGAAAGAAGAATTTCTtgacgatgatgaagaagtccaGGATGAAGAAGCAAAGGAAGAAGATTCGGATAATGATAATGAACAGGACAATGTCGCTATAGCGTTTCTGATTGATGCTGATAAGAAGGAAGTTGCTAAAGTGAAGAATAAGGCACTAAAGACCAAACCACGATACACAAAGGTAAAATTTCTAGATAAAGATATCATAGACTTCGCCAAATCTGTGAATTTCGACGTAACATTCTTGTCTGAGAACGAACAGTACGCGGAACTAGAAGAGAAGAAGAAGCACAAAACCAGCCGAGCACCCATCAAATGTGAAGATTGCGCCAAAAACTTCACCAGCAAAGACAAACTTAACACACACTACGAACGGGACCACAACCCGAAACTAAGGTTCCCATGCAAAATATGCAACTCCCGATTCACATATTTAGCCAAAATGAAATATCACATGAAATCACACAGGGAACTGTATACATGTAAACAGTGTTCTTTCAAAACTAAGAGGCAAGAGACGGCGCTTTCTCACCATTTATCGCACAAGGGACAAAAACACGAATGTCAGTTTTGCAAAAGAGAATTCGGGAAAATAACGTCTTATTTCTCCCACGTAAGATTGGTACACGCGGCCGAGTTGCCTTGGTGCGAAATGTGCGGGGAATCTTTTATTAATGAGAGGGGAATGAAGTTTCATAAGGCCCGAGTGCATAAAAATTTGGCGGCTGTTTTTAGTTGTGCGGAGTGTAGTGGGAAGTTTTCGAGTGAGGAGGCCTTAGAGAGACATATGTCGTTGAAGAGGTGTGACTTGGCGGGGTGCGTACTATGTGGCGACGGGTTTCCCAGCGCCCAGTTGCTCAAGTATCACCTGATCCAGAGACATAGGTCTGATATGCCGTTTTTGGACTGTGaagACTGCGGCATCAAGTTCCACAACGCCACGGCGCTCAACCGGCACCAGACCGCATGCGGGGTTGCCGTCCCGTGCGTGCAGTGCGGGGAGCACTTCGCGGACGAGGGCCTGTTGGTGGAACACGTTGCGGAGCGGCACGGCGGCGGGGAGGGGGTGGGGTTCAAGTGCGAGGAGTGCGACAGAACGTTCTCGAACGCGTACTACTACCGGGACCACTTCTCCAGGGTGCATCGGGACCGGGATGGCACGgTGAAAGTGATACGCGCACGGggccggcggcggcgcgcggaaGGTCGTACGGggtcgcccgcgccgcgcaaGTGGCGGCCCGCGGGGGGGGGCGCCGTGGAGCGCGCGGGGGGCGGCCGCAGCCGCGCCGCCGGCGGCCGCGCCGTCTGCGAGCTCTGCGGACGGGTGTTCAATTGCGTGGCCCGGCTGGAGAGCCACCTGCTGACGCACTCGGACGAGCGCCCCTTTCAGTGCGAGAGCTGCCCCAAGGCCTTCAGGTCGGCGTTCCTGCTCGAGAACCACGTGCGCGTGCACACGGGCGAGCGCCCGTTCCCGTGCTCGGCGTGTGCGAAGGCGTTCAAGACGCAGACGGCGCTCGGCAGGCACATGCTGGTGCACACCGGCATCCGCAAGCACGTGTGTCAGATCTGCGAGAAAACGTTTCAGACCTCTACCAGCGTTAAGACACACATCAAATTCGTCCACATGAAGATCCCCGCGCCCCCCCGCCACCGGCCGCGGAGGAAGCGGGAGAATATTCAGTCATAG
Protein Sequence
MAQDDEPVHLVSNEDIKKEIEDSVDSIPSQECVVCVKISCENSDIFATYTETSGRLIHSFLSKFSNTELPFCPNLTKYICSACLTLINVLDEAETAYLKVKHDFELIIRRNPLFQLPGGQCFKEEGDGSDSEMLVKDEDPMPEDFVQCQMKIEDVKEEDERESSNTINKIVKLELTEENISSETAECVGEGATVTGRLQAKDASKAEKLEKRRRRRRETAVERQHECSVCQRRFNLKHHLKDHMKIHTGEKAHECHVCAYRCSRKDDFARHLRTHTGEKPFECTVCQSKFTLKSHLREHTRTHTGEKPYECEICQRRFNYRHVLKSHSRIHTSEKPFECPICQRRFNRKTSLDEHLRTHTGEKPYECELCCKRYNQKSNLLKHLKTHSMAKMFVCQVCEKEFYYEYELRQHLQTHSEDRTQNTIMSTTTVALCRGCLSSSCKLYNIHKIGLTRSYVELVGNSLEDPHTKLLCSICAVLLQKFSAFRERCQKTYNLLVAAEFHGKCLDDVDISTYMGQLPYAKSVVQTLEYTDTFEEEDTLEEKIEVFDLKEEFLDDDEEVQDEEAKEEDSDNDNEQDNVAIAFLIDADKKEVAKVKNKALKTKPRYTKVKFLDKDIIDFAKSVNFDVTFLSENEQYAELEEKKKHKTSRAPIKCEDCAKNFTSKDKLNTHYERDHNPKLRFPCKICNSRFTYLAKMKYHMKSHRELYTCKQCSFKTKRQETALSHHLSHKGQKHECQFCKREFGKITSYFSHVRLVHAAELPWCEMCGESFINERGMKFHKARVHKNLAAVFSCAECSGKFSSEEALERHMSLKRCDLAGCVLCGDGFPSAQLLKYHLIQRHRSDMPFLDCEDCGIKFHNATALNRHQTACGVAVPCVQCGEHFADEGLLVEHVAERHGGGEGVGFKCEECDRTFSNAYYYRDHFSRVHRDRDGTVKVIRARGRRRRAEGRTGSPAPRKWRPAGGGAVERAGGGRSRAAGGRAVCELCGRVFNCVARLESHLLTHSDERPFQCESCPKAFRSAFLLENHVRVHTGERPFPCSACAKAFKTQTALGRHMLVHTGIRKHVCQICEKTFQTSTSVKTHIKFVHMKIPAPPRHRPRRKRENIQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-