Acon001108.1
Basic Information
- Insect
- Acrobasis consociella
- Gene Symbol
- -
- Assembly
- GCA_963555685.1
- Location
- OY743104.1:21305377-21306276[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-08 2.7e-05 24.7 0.0 2 35 25 58 24 60 0.93 2 2 6.1 2.5e+03 -0.8 0.1 1 15 143 157 143 159 0.89
Sequence Information
- Coding Sequence
- ATGAAACCAAAAAGCAGTAAAAAAGCCACTTCTtcaaagaaaaatgaaaaaataagaagaaaaagatataGTAAAGAAAATTTACTAAAAGCCATACAGGCTGTGAAGAATGGAATGAGCAAAAAATTAGCAGCTAAGACATTTGCATTGCCACGGTCTACATTACAATTTAAACTCAAATTTCCGGATAAAGTTACATCTACACCGGGCCCTCCAACGGTTTTGAGCCACAATGAAGAACTTTTGCTTAAGGAATGGCTCATCAAATGTAGCATGAAAGGGTTTCCGAAAAGGAAAGCTGATCTTTTGGCCAGCGTAGCCGAATTCATAAAAAGAAGTCAAAGACCAAATCCATTTAAAAATGGAATTCCTGGTGATAAATGGTTCAAGCTTTTTTTGGGACGTCATCCTGACCTCGCAATAAGAACACCAGAAGCAGTTACTGCAGCCAGTGCAGCAGTATCTGAAGGGGATATAAGGGGTTGGTTTAAAATGATAACACAATACTTCGCAGACAATGGTTTTTTGTCAATTTTGTCAGAACCAGACAGAATATTCAATGGTGACAAAACTAATTTCATTCTTTGCCCAAACACTGGAGTAGTACTAGCACCTAAAGGGGCTCAGAACGTTTATGAAGTTGATCATGCGCCAGCTAAAACATCTTTAacagttttatttacttttggaGCTGATGGAACACTTACCCCACCGCTGATCATTTATCCCTACAAGCGGATTCCAGGTGAAGTAACTTCTAGTGTTCCTTTAGATTGGGGAATTGGAACGAGCGACAATGGGTGGATGAAAGCGAATATTTTCAAGGAGTACATTCAAAACGTATTTCATCCATATCTGGTAAAAAAAAAGCACAAAATTTCCTATAATTCTCTATGTTGA
- Protein Sequence
- MKPKSSKKATSSKKNEKIRRKRYSKENLLKAIQAVKNGMSKKLAAKTFALPRSTLQFKLKFPDKVTSTPGPPTVLSHNEELLLKEWLIKCSMKGFPKRKADLLASVAEFIKRSQRPNPFKNGIPGDKWFKLFLGRHPDLAIRTPEAVTAASAAVSEGDIRGWFKMITQYFADNGFLSILSEPDRIFNGDKTNFILCPNTGVVLAPKGAQNVYEVDHAPAKTSLTVLFTFGADGTLTPPLIIYPYKRIPGEVTSSVPLDWGIGTSDNGWMKANIFKEYIQNVFHPYLVKKKHKISYNSLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -