Acon015038.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acrobasis consociella
Gene Symbol
tpsp
Assembly
GCA_963555685.1
Location
OY743117.1:2890358-2921939[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-09 1.8e-06 28.5 0.1 4 40 114 150 111 154 0.87

Sequence Information

Coding Sequence
ATGAGTGAAACGAAAACGAAGTGTGCCAGTCGCACTGCGTGCAACAGTAAAGGGAGCATGATTGTTGTTTCGAACCGCCTGCCGTTTATCCTCAAGAGGAATGAAAAAACCGGGGAGTTAGAGAGAAAGGCCAGCGCCGGAGGGCTGGTGACGGCCGTGGCGCCGGTGGTCATCCGGTGCAACGGCTACTGGGTGGGCTGGCCGGGAATCCACCTCGAAGACCCCAACGAGAAGATTCCAGAGTCTGACCCAAATGACAAAACCCCCACCGCCGGCCTCCTCTCCAAAAAGGTTCCCAATATGTCTGAAACGAAAACACGTAATGCTTGGACACAAAGCGACTTAGAAGCAGCTGTCACTGCTGTTCGGACAGGCTTATCTTCATACAAAGCGTCTGAATTGTATAAAATTCCGCGGCGGACACTGAGAGATTACATGAAGAGCGGGAATAAATCCAAACTTGATTTAGGACGAAAGACAGTATTAACAAAGGAACAAGAAAAAGATTTTGTGAAGAGAATCATTAGATTTGCAGACTTGGGTATCCCTTTAACTCCGAAAATGATTCGTAAACAAGTATTTGTTTTCTGTGAGAGGTACAATATTTCCAATAACTTTAATAAGCAATCACGCCTTGCTGGCCAAGATTGGCTTAAGCTGTTTTTGAGAAGAAATAGTGAAGTAGCAAAACGTAAAGCCCAATTTTTAAATCAAGCTAGGGGccaaaaactaaacaaattcaTAGTATCACATCatttcaaagaaattaaaaagcTATACGATGAACTTGGTATACACTACAATCCCGAGAGACTGTATAATATGGACGAAAAGGGGTGCCGCTTAACAATACATAAACAACCAAccgttattacaaaaaaaggagCAAAGAGAATTCACATTCAAGCATCAGAACATGGTGAAAACGTCACAATTGTGGGCTGTGCAAATGCCGTGGGGAACCCAATACCACCTATGATACTATTTAAAGGAGTTAGAAGAAATCCTGAGTTTGAAAAAAATCTACCACCAGGCACAATTGTAAGGATGGCACCAAAAGGTAGCATGACGACAGAATTGTTCATTGAATTCTTGAGACATTTCGCTAAACATAAGACTGCGGGAAACTGCCTCTTAATCTTCGACGGGGCAAAATGTCACTTAGATTTCAGAATTGCCGAAGAAGCTGACATACTTGGGATCACTCTATACTGTCTTCCGTCTAATACCACGCACGAGTTGCAACCTCTTGATAAGTCGTGTTATAAACCTTTTGAGACTTACTGGGACCAAGAGGTCTTgcaacatttttacaatacCCATGCTCAAAAGTTGACGCGCCCCGAGTTCAAtaagattttatcaaaaatttggTCTAAATGCATGTCACATGACAACATCACAAGCGGCTTTCGAGCTACAGGATTGTACCCTTTCAATCCAGATATTTTACCTGAAACTGCATTTGCACCATCCGTTTTAACTGAACAGCAGGTACCTCAAAACGAAGACGAAGTTGAATCTCACGCTTCTTCACCAATAGCAATTGACTTTGAAGAGCTGCAAATGTCTGAAAATGTAGCAGAAAATATTCCATCCACGTCAGCGGCCTCATTTGAAACAGGCTTGCATTGTACAAAGAGGCTTGTGTGTTATAGTTCGTCCTCAGACGAGACATTTTGTGAAGATGCTTCTGATGATGCCGCTATATTGAAAATGTTACCACCCAAAGTATTTACCCCACCACGAACGATGCCTGAGCAACCTGGGTCAATAATCGTGCCTATAAACGCGGAGCCAGGTCTCTTCGACAGCTACTACAACGGCTGCTGCAACGGCACCTTCTGGCCGCTGTTCCACTCCATGCCAGACCGCGCCACCTTCATTGCTGACCACTGGAAAGCCTACATCAAGATCAATGAAGAGTTCGCCGATAAGACCGTCCATGCCCTGAATCTGCTAAAGGAGGACAAGGAAAAGATCGGGTCGCCTCCGATCGTTTGGGTCCACGATTATCACCTCATGCTGGCTGCTAATTGGATCAGACAGCGCGTAGAGGAAGACGACATCAAGTGCAAGCTGGCCTTCTTCCTTCACATACCCTTTCCAGCATGGGACATCTTCCGGCTGTTCCCGTGGTCAGACGAAGTTTTACAAGGAATCCTTGGTTGTGATATGGTCGGATTCCACATAACAGATTACTGTTTAAACTTCATAGACTGTTGCCAAAGAAAGTTAGGTTGTCGAGTGGACAGGAAAAACCTTTTGGTGGAATTGGGTGGGCGAACCATCTGCGTGCGCCCACTTCCCATTGGGGTGCCCTACGAGCGGTTTGTGCAGCTAGCACAAAACGCGAAAGCAGTGCTCTCTACCAACCAGAAAGTCATTCTCGGAGTCGACAGACTGGATTATACCAAAGGACTAGTGCATAGACTTAAAGCCTTCGAGAGACTACTAGAGAAACACCCGGAGCACATAGAGAAAATTATGTTGCTTCAGATTGCCGTTCCTTCCAGAACGGATGTCAAGGAGTACCAGGATTTGAAGGAGGAAATGGATCAGCTCGTTGGAAGGATCAATGGGAAGTTCACCACACCCAACTGGTCTCCGATTAGATATATCTACGGTTGTGTGGGGCAAGACGAGCTGGCGGCATTCTACCGCGACGCAGCCGTGGCGCTGGTGACGCCGCTGCGGGACGGCATGAACCTCGTGGCCAAGGAGTTCGTGGCCTGTCAGATCAACTCGCCGCCGGGCGTGCTCATAGTGTCGCCATTCGCCGGCGCCGGGGAGATGATGCACGAAGCCCTCATATGCAACCCCTACGAGCTGGATGACGCGGCTGAAGTTATCCACAGAGCCTTAATGATGCCTGAGGACGAACGCACCGTGCGCATGAATCTCCTGCGCAGGCGCGAGCACCTCAATGACGTGGACAGCTGGATGAAGTCCTTCCTCAAGGTCATGGACTCGCTGGAAGAAGAGGCCGACGATGTCGGCGCCACCTCTATGCAGCCCGTCACCATGGACGACTTTGATGAATACCTTTCTAAATACATTGGCTACACCCAGAAGCTGGCGCTTATGCTGGACTACGACGGCACGCTGGCGCCCATCGCGCCGCACCCCGACCTGGCTACATTGCCGCTGGAGACCAAACACACCCTGCAGCGGCTGTCTAATATGTCGGATGTGTACATCGCCATCATATCGGGACGCAACGTCGACAACGTCAAGAACATGGTGGGCATCGAGGGCATCACGTACGCCGGCAACCACGGGCTGGAGATCCTGCACCCCGACGGCAGCAAGTTCGTGCACCCCATGCCCATGGAGCTGCAGGACAAGGTCGTTGACCTGCTCAAGGCATTGCAGGAACAGGTTTGCAAGGACGGTGCGTGGGTGGAGAACAAAGGCGCGCTGCTGACGTTCCACTTCCGCGAGACGCCGGCGGCCAAGCGGCCCGCGCTGGAGGCGCAGGCGCGCAAGCTCATCTCCGCCGCCGGGTTCacgcccgcgcccgcgcactGCGCCATCGAGGCGCGCCCGCCCGTGCAGTGGGACAAAGGTCGCGCATCTATTTACATCCTAAGGACCGCCTTTGGACTGGACTGGTGCGAGAGGATCCGAGTGATCTACGCTGGAGATGACGTCACCGATGAGGATGCTATGTTGGCTCTCAAAGGTATGGCAGCGACATTCCGCATCGCGTCCTCGCAAATCACCAAGACGTCTGCAGAGCGGCGGCTGTCGTCGCCCGACTCGGTGCTGGCCATGCTCAAGTGGGTGGAGCGCCACTTCTCCCGCCGCAAGCCCCGCGCTAACTCTCTCACCTACAAGAGTGCGCGCAAGGCCCGCGACACCCTTCACATGCAGATGTCCTACCAGCTACCTGCCAGGACCTCCCCTATGCAGACCCCTCCTAGAACCCCTGAGAAGACCTCTAGTGGCTCCGAATCCAGTTAG
Protein Sequence
MSETKTKCASRTACNSKGSMIVVSNRLPFILKRNEKTGELERKASAGGLVTAVAPVVIRCNGYWVGWPGIHLEDPNEKIPESDPNDKTPTAGLLSKKVPNMSETKTRNAWTQSDLEAAVTAVRTGLSSYKASELYKIPRRTLRDYMKSGNKSKLDLGRKTVLTKEQEKDFVKRIIRFADLGIPLTPKMIRKQVFVFCERYNISNNFNKQSRLAGQDWLKLFLRRNSEVAKRKAQFLNQARGQKLNKFIVSHHFKEIKKLYDELGIHYNPERLYNMDEKGCRLTIHKQPTVITKKGAKRIHIQASEHGENVTIVGCANAVGNPIPPMILFKGVRRNPEFEKNLPPGTIVRMAPKGSMTTELFIEFLRHFAKHKTAGNCLLIFDGAKCHLDFRIAEEADILGITLYCLPSNTTHELQPLDKSCYKPFETYWDQEVLQHFYNTHAQKLTRPEFNKILSKIWSKCMSHDNITSGFRATGLYPFNPDILPETAFAPSVLTEQQVPQNEDEVESHASSPIAIDFEELQMSENVAENIPSTSAASFETGLHCTKRLVCYSSSSDETFCEDASDDAAILKMLPPKVFTPPRTMPEQPGSIIVPINAEPGLFDSYYNGCCNGTFWPLFHSMPDRATFIADHWKAYIKINEEFADKTVHALNLLKEDKEKIGSPPIVWVHDYHLMLAANWIRQRVEEDDIKCKLAFFLHIPFPAWDIFRLFPWSDEVLQGILGCDMVGFHITDYCLNFIDCCQRKLGCRVDRKNLLVELGGRTICVRPLPIGVPYERFVQLAQNAKAVLSTNQKVILGVDRLDYTKGLVHRLKAFERLLEKHPEHIEKIMLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGKFTTPNWSPIRYIYGCVGQDELAAFYRDAAVALVTPLRDGMNLVAKEFVACQINSPPGVLIVSPFAGAGEMMHEALICNPYELDDAAEVIHRALMMPEDERTVRMNLLRRREHLNDVDSWMKSFLKVMDSLEEEADDVGATSMQPVTMDDFDEYLSKYIGYTQKLALMLDYDGTLAPIAPHPDLATLPLETKHTLQRLSNMSDVYIAIISGRNVDNVKNMVGIEGITYAGNHGLEILHPDGSKFVHPMPMELQDKVVDLLKALQEQVCKDGAWVENKGALLTFHFRETPAAKRPALEAQARKLISAAGFTPAPAHCAIEARPPVQWDKGRASIYILRTAFGLDWCERIRVIYAGDDVTDEDAMLALKGMAATFRIASSQITKTSAERRLSSPDSVLAMLKWVERHFSRRKPRANSLTYKSARKARDTLHMQMSYQLPARTSPMQTPPRTPEKTSSGSESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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