Basic Information

Gene Symbol
pnr
Assembly
GCA_035041075.1
Location
JAWWLR010000148.1:29220315-29248629[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-17 3.8e-13 51.2 2.6 1 35 468 501 468 502 0.97
2 2 1.2e-18 1.5e-14 55.7 5.4 1 35 527 560 527 561 0.97

Sequence Information

Coding Sequence
ATGAAGGAGACTCTCTCGAAACAGGATATAAAATTAGAGTGGGAGGACCGACGTTCATCCGGAAACAGTTCTCCTCAGGTGACGAGAATGTCCGAGGAACAAACAAGTGGAAGTCCACAAAGCGTCATCACGACTCGAAGGTATACCCGGACGATCACAGCCACAGGTCACATCACCGAGACGATAGCTAGTCAAGAACCACATTCTCCGGAAACAAATTCTAACATGAAACAGGACGAAAATTCCGATCAGCGAAGATATCAAGAGGAGATGCAACATCATGCAGACCATGTCCCAATTTCTCCTCACGGTAGTCCCAATCAGCAACACGTGGGAGATCAACATCCTGTTATTTTCTCAATCAGCAACGGACAGGAACTCCAGGTCGAAGCTGTTGAACCTTCTGAAGCAAGGAAAGAACCACCTAGGTACGAATCTGCAATTCCGGAGAGATCAGAAAGTGAGAGGATCTTCCTTTTCTCCAAGGATCCAGAAATGAGGAGAGATAGTCACGTGATTGCTCTTCAAGTTCAGGAACATCGCAGACATCAGGCACAGCATCATAGAATCAGTCCTCACCAGAATAATGAACAGGGAAGATATCAACATTCACCTGCCAATGCTTCCAATGAGGATTATGATTCAACTGTTATGGTTGTTCAACCGGGAGGTGTTCAACTGACAAACTCATCAGCTACTTATTCACCACCGACTGAATTAAGAACTAGCCAACATCAACAAATCATCAATGCTGCCTACGCTGATGCTGCAAACGGCACTGTCAAGTATGATACAGAAACCACTACTGCTGCTGACAGTATCAAAGTCTCTAGTACTTACACAACCCTGGAAACTGCAGCTCTTGCACCTCCCCAAGCAGTTCCTTATAATCAGTACCTTGTAGCTGCTGACGCTTTCCAACAACCTGGTGGATATAGTTACACCAAATCCGGAGAATTTTTCTTCTTGCCATCTAGTAATCCTTCCGGAGTAAGAGCTGAGGTGGAACCGCCAGCTTATATAAAAAGTGACCCAACCCTAACATCGTCATCGCTCCTCAATACTCGAACTGTAGCTCTTCAGTATCAACCAGGTTCTCCAGGTTCACAAATGGATCTTTACAGTACAGGTGGCACAGTTGCTTATCCATATCCAAAATCTGTAAACGAACACTATTGGTCCAGTGGACCAGGATCGCCTCCAGGAATGGAATGTGGACAAGGTTACCCAGGTGTGACGATATCACCTAGTGATGCTGGAAGTGTCAACACGGGAGCTTATTCTGGTGGTTCCTACATCACCTCTGGACCAAATGGACCACCATCACCATGGGGGATACATCTTCCTAGTTCTATGGACTCTGGGTTGGATGAACAAGtcttaaattcagaaatgaaGGAGTGTGTCAATTGTGGGGTCATGGGAACACCATTATGGAGACGAGATGTCACTGGAAATTACCTCTGCAATGCCTGTGGTCTTTACAATAAAACAAATGGAGTTAGCAGACCACCTATTCGTTGTGCAAAACCAAAACAGGCCATCACACCGggcgGTGGAAGAAGACCAGGAGTAAGATGTGCAAATTGCGGGACAAGCAACACAACCCTCTGGCGAAGAAACAATAATGGAGAACCAGTTTGCAATGCCTGTGGTCTCTACTTCAAACTACACAGTGTAAATCGACCCATGAGTATGAAGAAAGACGGAATCCAGACTAGGAAAAGGAAACCGAAAAATCATGCCAGTATGGGATCAGGCATTGGCGGACCAAGTGGTATACACAAGACCGAGATTAAGTCCAGCTTACTCGTGGACTCGAAGCTGCAGTTGAGTATGTACTCAAACGGTGGTAAGGGTGGAGGGGGCAACGATCATTATTCTCCTGTAGGTACATTAACGACTTCACATTTAGGACATGCTCATTCGCCCCTTGCATTACCTTCTGCCGCAGTTTTGAATCGTCAAACTACCCTAActgtgcCACCTCTAGAGCCAATCCATAGTCGAGCAAGTACTGACCTCACGACGGTCATAACATCAACGACAGCAGCAATGCATACCGACAGATCTTGA
Protein Sequence
MKETLSKQDIKLEWEDRRSSGNSSPQVTRMSEEQTSGSPQSVITTRRYTRTITATGHITETIASQEPHSPETNSNMKQDENSDQRRYQEEMQHHADHVPISPHGSPNQQHVGDQHPVIFSISNGQELQVEAVEPSEARKEPPRYESAIPERSESERIFLFSKDPEMRRDSHVIALQVQEHRRHQAQHHRISPHQNNEQGRYQHSPANASNEDYDSTVMVVQPGGVQLTNSSATYSPPTELRTSQHQQIINAAYADAANGTVKYDTETTTAADSIKVSSTYTTLETAALAPPQAVPYNQYLVAADAFQQPGGYSYTKSGEFFFLPSSNPSGVRAEVEPPAYIKSDPTLTSSSLLNTRTVALQYQPGSPGSQMDLYSTGGTVAYPYPKSVNEHYWSSGPGSPPGMECGQGYPGVTISPSDAGSVNTGAYSGGSYITSGPNGPPSPWGIHLPSSMDSGLDEQVLNSEMKECVNCGVMGTPLWRRDVTGNYLCNACGLYNKTNGVSRPPIRCAKPKQAITPGGGRRPGVRCANCGTSNTTLWRRNNNGEPVCNACGLYFKLHSVNRPMSMKKDGIQTRKRKPKNHASMGSGIGGPSGIHKTEIKSSLLVDSKLQLSMYSNGGKGGGGNDHYSPVGTLTTSHLGHAHSPLALPSAAVLNRQTTLTVPPLEPIHSRASTDLTTVITSTTAAMHTDRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01393163;
90% Identity
iTF_00064853;
80% Identity
-