Aeri013177.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- -
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000034.1:53271800-53384057[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 3.9 1.6e+03 2.3 0.9 1 14 534 547 534 550 0.90 2 11 0.00058 0.23 14.4 3.7 1 21 1157 1177 1157 1178 0.96 3 11 0.039 15 8.6 2.0 1 21 1353 1373 1353 1374 0.96 4 11 0.00097 0.39 13.7 6.4 1 23 1382 1405 1382 1405 0.93 5 11 3.2 1.3e+03 2.6 0.5 1 11 1417 1427 1417 1429 0.93 6 11 0.0042 1.7 11.7 4.5 1 21 1632 1652 1632 1653 0.96 7 11 2.9e-05 0.012 18.4 4.3 1 23 1661 1683 1661 1684 0.96 8 11 5.3e-05 0.021 17.6 1.4 1 21 1852 1872 1852 1873 0.96 9 11 0.025 9.9 9.2 0.4 1 23 1900 1923 1900 1923 0.95 10 11 6.3 2.5e+03 1.7 1.7 1 21 1997 2017 1997 2018 0.96 11 11 0.28 1.1e+02 5.9 0.0 1 21 2066 2086 2066 2087 0.91
Sequence Information
- Coding Sequence
- ATGAGCGTGGCAACTCTGCACCCAGTTTACTGGCTATTGCTAGGTACTCACGCACGTGGACTTGACAAACGCCTTCATCAGCCAGATCATCAGCACAAGAATTGGTGGAAGAAATCCCAAGGTGGCCCATATTCTTATACAGCTACTAAAATTCCTTCTGCCAGTAAATGTGCTGACAAAACTTTAATCGAATATGACAATGATGAAACtatggaaatcaaggaagaaaTTATTCATGGGCAAGAGAATTCCAAGAGGGAGTGGAAAAAATCAACAAGAAGACCAGATCGTGGTCCATATTCTTGTATAACTACTAACATACCTTGTGATAAATATTCTAATGCCATGACATTAATTGAATACGACATTGACGAATCTTTGGAAATCAAGGAAGAATTAATCACAGATCCACAGAGCAAGAAAAAGGCGAAGAAATCCAGAGGAGAATATGGTGGGTCATATTCTTGTATAACTGCTGATGTTTCTTCTGACAATGATTTTATTGCCAATAATTTAACTTGCATAATTAAATACGAAAATGACGATAGTTTGGAAATCAAGGAAGATCTGATCCAGGaTCAAGAGCAGAAGGAAGTTCAGGAACAAAGACCTGATGAAAAATATGATACAATTTTGGACGTTAACGAACTGCAAGGCAAATTGAAGCAGAAAATAACTTCTTACCTAGCTTGTGGCAATAAGTCTGCTGACATGACTTTAATTGAATACGAAATCGATGAAACTTTAGATACCAAGAAAGAAATCATCCCAGataaacagAATTTCAAGAGTGAGACAAATAAATCATGGAGAAGACTAGATCGTGGACCATATTCTTGTGCAAATACTTGCACTTCTTCTTGCAAGAATTCGAGTGCCAAGCCTTTAGTTAAATACGAAATTGATGAAACTTTCGAGATCAAAGAAGAATTCGCCTCAGatAAACAGGATTCGATGGATAAGACGAATGAATCAATAGGAACAATAGATTGTGGACCATATTCTTTTGCAACTGCCTACATTTCTTCTTGTGAGCATTCGAAAACCAAGACTTTACTTAAATACGAAACTGATGATACTTTGGAAATCAAAGAAGAATTTGTCCTAGatcaagAGACAGATGCAGACCAGAAAAGCAATAAAACATATGAGTCAAAAGTGTGTACTGTCGATATAAGTGATGATGCTAGTTTAGCCGTTCAGAACAAACTGCGTACCCATAAAAAGCAGAAAATTCACGATACAGACTTGGATAGGAAATACAAATGCCAAAAGTATCAGAAGAGCAAGAAAAACTCGAAGAAATCCAGGGGAGGGCATGATGGGCCATGCTCTTACATAACTGGTGATGTTTcttcttataataattttgatgCCAATGAGTCAACTTCCATAATTAAATACGAAAATGACGAAACTTTGGAAATCAAGAAAGAAATTGAACAAGAACAAGATTTATCCCAACAAATggataatataaaatatgaaacagTATTATTTACAGTAGATAAAATAGAAGAGGATGTTTTGCCTGCCGGCAGAAAGCGGAGGCAAAAGAAGCAGGCAATTCAGGAATCAAAACAGGAAACGGGAAAAAGATACAAGTGCGAAAAGTGCGCTCGAATCTATAAACACAAAAATAGCCAACAAAGCAAGAGAAAATCGAAGAAATACACAAGAGGACATGGTGGGCCATATTTTTATATAACTACTGACATATCTTCTGATAATTATTCTGATGCCATGACAATGATTGAATACGACATTGACGAAACTTTGGAAATTAAGGAAGAAGTTGTTCAAGGTAAGCAAACCAAGTGCAAGTCGAAGAAATCCAGAGAGCATGGTCGTCCTGATGTTTCTTCTGAGAATAATTCGGATACTAAAACTGTAACTTGCATCATTGAATATGACAATGACGAAACTttggaaatcaaggaagaaaTCATCCAAGATCAACAGAACAAGAGAAAGTCGAAGAGATACAGACGAAGTCATGGTGGGCCATACTCTTGTATAACTGGTGATGTTTCTTCTGACAATAATTGTGATGATAAGAAGTTAACTTGCATAATTAAATACGAAAAtgatgaaagttttaaaatcaaggAAGAAATGATCCCGGATCCAGAAACCAAGGAAGTTAAGGTCGAACAAACTGATGAAGAAAATGATTCAAAAGTATGCACCCTAAGTATAAGAAAAGCTGCTATTTTGGACCTCAGCAAACTGCGGACCAAATTGAAGCAGAAAATAACTTCTCACATTTCTTCTGGCAGTATGTCTGCTGCCAAGactttaactgaaaaagacaTCGATGAAACTTTCGATACCAAGAAAGAAAGCATCCAAGATCAAGAGACCAAAAACAAGTCGAAGAAATACACACTAAGTCATGGTGATGCTTCTTCTGACAATTATTCCAAAGCCATGCCGTTCATTGAATACGAAATGgatgaaactttggaaattaaGGAAGAATTTATTCAAGATCAAAATACGAAGGATATTAGGGACCAAAAACTTGATAgggaaaatgatttaaaagtatgTACCGTAGGTATAAGAAAAAATGATATTACGGACCTAAAAAAACTGCGGACCAAATTGATGCCGAAAAGGACTTCTCACATTTTTTCTGGCAATAAGTCGGCTGCCAAGGCTTTCGTTGAAAAAGATATCGATGAAACTTTGGATACTATAGAAGAAATCGTCCAAGctcaaCGGAGCAAGAAGTCAAAGAAATCCAGAGGAAAACGTGGTGCGGCATATTCTCGTACAACCGCTCGCACTTCTTCTGGTAATAAGTCTGCTGTCAAAACTTTAATTGAATACGACGTTGATGAAACTTTGGATATCAAGGAAGAAATCATCGAAGATCAGCAGAGCAAGTGTAAGTCGAAGAAATCCAGAGGGCATGGTGGGTCTGATTTTTCTTCTGACGATAATTCTGATACTAAAGCTTcaatttgcataattaaatacGACTATGACGAAACCTTGGAAATCAAAGAAGAAATCATCCAAGATCAACACAATGACAATACAGGGTCGAAGGACTTAACTGAAATATGGGATGGCGAGGCGTATTCTTTCATAACTGCTCACATTTCTTCTGACAATAACTCGAATCCCAATAATTCAACTTGCGGAATTAAATACGAAAATGAAGAAACTTTGGAAATTAAGAAAGAAATCATCCAAGACCAGCCCAATTTCAACAGACATTCCAAGGAATCAACGGAAAGAGGGGATGGTGGATCATATCTTTTTATAACTACTGACATTTCTCCTGACAATAACTCCAATGCCAAAAACCTGGCTTGCAATATTCAATACGAACATGACGAAACTttggaaatcaaggaagaaaTTATTCAAGATCTAAGAGAAGCTGCTATTTCGGAGGTTAACAAAGAGCTGCCCAAATTAAAGCAGAAAATTCAGGAATCAATCCCGGAAAATAAGTATAAATGCGAAAAGTGTGCGCGATGctataaaaataaaggaaatttgacTTCTCATCAAAAATACGAGTGCAATGTCGGGCCACAGTTTAGATATCAACATAAAGCCACAAGAAAATCTAAGAAATCAACAGCAAGATGGGATGATGGGCCATATTCTTTTGTAACTACTGATATTTCTTCGGACAATAACTCTAATGCCAAGAGTTTAACTTACATTATTAAATGCGAATACGACGAAACTTTGGAAATCAAGGAAGAATTTATTGAAGATCAACGGACTCAGGATCAATGCTCATCTCAACAGTTCGATACTCAGCATGACTCTTACATAATACCTGATAATTCTTTTGAGAATAAGTCTAATGCCAAGGATTTATCATACAACATTAAATGCGAAAATGGTGAAACTTTGGAAATCAAGGAAGACATCAGCGAAGatcaaggAATTCCCCGCGAAATGGTTACTGAAGAATTTGAGTCAAAAATGTTTACCCTGGTTGAAAATGATGAAGATGTTTTGCCTGCTAACAAACTACAGAGaccaaaaaagaggaagaaaatgcAAGAATCGACACCGGATGAGAAATACAAATGCGAAAAGTGTGCTCGAATCTATAATTCGAAACGAACTTTGACTTATCATAAAAGATACGTATGTGATGTCATACCAAAGTTCACTTGTGAATACTGTGGCAGACGATTTAAACAGAGATGTCACATGACTCGCCACGTGgctaacaaacattttaaaacaaacatagAGACATCGAAAATTAAGTATAAATGCGACAAATGTTGGCGAAGTTACAAATGGCCAGATCAGCACACTAAGCGTAAGTCGAAGAAATCAACAGGAAAACCATTTGGTGGGACATATTCTTGTACAACTACTACCAAAGTTGCCAACGATAATTCCGATACTAACACTTTAACTTGCATGATTGAATACGAAAATGATGGATCAGTCGAAATCAAGGAAGAAGGCATCCATGATCAACAGAGTGTGCCAATTAACGCCAAGTATTTCAGTAGTACATCGAAGAAATCAACAAGAAGACGAGATGATGGTCCATATTCTGCTCTTTATTCTGTCAACGCAAAACATGCCGAGAATAAGTCGAAGAAATCAAGAAGGAGACGAGATGATGAACCATATTCTTCTATTCACTGCGATCACTTTATGGCTTTTAAAACTGTGTTCTTGAGTCACGAGAGGGAAGAGCTCAATCTTCCTTCTGACGATAATTCTATTATCAAGACTTTAATTGAATACAACACTGATGACACTTTGGATATTAAGGAAGATATCATCCAAGGAAGAGTCATAAACGAGTTGTCGAAAAACTTGCGAGACTATCCAAACTTGCCTTTGTTAAAAGGTTCGGCAGACATCTGGGTTGGAAAAAGAAGCATTCAATTTCCATTTCGATGTGATCAGTGTGGAAAACAGTATCAACATCGGACTACTCTTCAGAGGCACACTAGACACGAATGCGGAAAAGAACCCCGTTTCAGgtgTCCGTACTGCAGCAGACGGACTAAGCAACGCGGGAATTTGTATCAACATATTCGAACTCATCATCCTGGAAAGGACGTTTTTTatcTGAGTAAGGTTTTTATAAAGGAGGAATACCCGACATACCAGATAGAACCCTTCATGATCGACGTAAGAGGAAATGATATCCTGTCTGTACCCAAGAGGCTTGACGATACTAGAATGAAAATTGCAGAACCGCGGCCTAAGCAGGAAAGGAAGCATAAATGTGatcagCATAACCCTAATATATCCAATAAATATATAGCGCTGGCTGAAGATTCGTGCTTCCTTGATATAAAAGAGCAGAATATTTTGGATGACTACAGTACTTTTGAGACAAGGGAGGAATCTCCAAATCAGGCATCAGAAAAAAATCCAGGTGAACAAAGTGTTCTGAAAAAGGCCCTAGAATCGAGAAGTTATTTACATCTTGGAAAAACGAATAGAAATTTTGAATCGAGACCCTGTACATTTCAAACCGTCTACGAAACTCAAGTACAGGGGATGTCTGTTAATCAAGGAAGAAAGCACAAATCTCAAAAGAAGTTCCAATGCAACATGTGTGGGCGAAGTTATGTTCACCAACCGAATTTATCTCGACACAAACGTTACGAATATGATCCTAGTACTCCGATTGCTGCAAAACAGAATTACTTGAAGAAAGGAAGAGGAAGACCAAGGAAAGGCCCTTACATTTGCTTTAGCTGCGATGaggtttttaattataaagcacCTTTTTCAAAACACTTGAAAGAAGCTCACAATATTACGCCTGAAAAGGTTCCAAAAACGCCTAAGAAAGTTCTCCCGACCACAAAGATTCTTGAAAAGACATTTGAATCGAAAAATCAGAATGAATTTCAgtctgaagaaaatttgaaaatcaaggaAGAAGTGATCGGAGATGAAGAAACTACTTCAAAGACTGTTATAGAACCCACAAGAGATTTGATGAAAAGAAGAAGACAAAGTGAAGGACCCTATGTTTGCTCCCGTTGCAGCGATACTTTTGAATTAAGGGCATGTTTTTTAAAACACCAGAGAGAAGATTGCGTAATAACTCCTTCCAAGAAAAGAACGGTTAAAAGCGAGACAAAAGTTGGGGCTTATGATCAAAGTGTTTCGAACGACCCCTTGCTTCCactaaggaattcaaaaaaaggAAGAGGAAGGCCGAGTGAAGGACCCTACATATGTCCAGATTGCGGAATATTATTTCCCCTGAAAGTTCCTTTTGTGAGACACCAAACAAAAGAATGCACTATGCGTCCTCCTCGTCTTCTGCAGAAAAGAGGAcccaaaataaaacaaacttcTAATGATTATTCTAATGATTTGGCGACAACTGAAGAAGTTCCTATCACCGTCAGTCCATCGATAAATATTTTACCCGAGATTCTACCAGTTAAGTGCTCGCATGCGCAGAAAAATGCGCGCTGCAAATCCCGAATCCCGGTATGTGATCCAAGGTATCCCAATGGGAATGGGATAGTAACAGCTCCAATTCAACGGCCTGTCGCGCACGACGCCAAACGACCGGAAAAGTCCCTGGATGTGATGAGGCGACTTCAAGACGAAGGAATGAGCTGTTGTTCTTTCCTTGACCTAACGGAAGCGGATCTGAACCTAATGGAACTGAACATGGACAGAACAGAATTTGTTGTACAAGAAGATGGATCTCTGGTCTCTGAATGCAATGATGAACCTAACGCTTCTCAAAGAATAAGGGTACGGTCTGATATTCAGGAAAAAAGAAATACTCAATCTGGGACTGGTACTAGCAAGGTGTCATTACACATGTTTTCgCGTTTTGGAACCGTGAGAGCTACACTTCTTCACCGTGTTGCTGAGGGTCAAGCACTGGTCTTGGCTGCCAATGGTTCATTCACAGAAAATAACAGGAGAGCCTTGATGCGAATCCTTATCTCAGAACTTATCAAAGTTCATGGTAgctgTTATCCTCCTGACGAGGCAAAAGTTGCCCTGGCACAGGCAATCGTTACAGAGTTTCCCCTTTTGAGAAATACGCGTACTAAGAAAGGATACGAACACTACTATGATGAAGAAACGAGGCGAGGATTTATCGAGTACAGACTATGGAATGTTCGCAGAACTCTTAGTCCatctcagaaaaaatataaaactaagacTCTTGATTCGAGCAAACCAACCCCTGTTGTATCTAACATTAACCTCTTATCCCAAGAAGAACTTGATACAAAGATCGCTTGGATGAAGTGTACAAATCCTTCGGACAGCAACAAACAGAATATCGCCACTCATTTACAGGAAACACTACAAAATCGGAGAGACTGGATTATTAAAAAGAGCCCAAATATCTCGCAGATCTTACATGAATATCCGCGATTATTAGACTACAATGGCGAGATGATTAATAACGAATTTCGGTATTTCTTTAAAGAGAAAAGTTTCAATTTCCTGGCCAGATTTCCATCCTATTATTGTCCACGAATTTTGGAATACGCTAAATTAAACCGCCTGGACGTATACAATCGCTTAAAAAACATCACCGATGtAAATCTCCGGGCCTTGTTTATTCTTGCGGACTTGCTACGAATCAATAATGCAATGCTGTCACAACAAGGCGATAAGGGAAAGGGAAAGATGAAAGGAAAGAAGAGGCAAAGAAGTTCGGATGAAGCAGAAATGATAGAGAAGGAGAAAATTGATGTTCCCAGTACCTTTTTGGTACGATTTGTAAGTACTTTTTTCATaatcgaaatattataa
- Protein Sequence
- MSVATLHPVYWLLLGTHARGLDKRLHQPDHQHKNWWKKSQGGPYSYTATKIPSASKCADKTLIEYDNDETMEIKEEIIHGQENSKREWKKSTRRPDRGPYSCITTNIPCDKYSNAMTLIEYDIDESLEIKEELITDPQSKKKAKKSRGEYGGSYSCITADVSSDNDFIANNLTCIIKYENDDSLEIKEDLIQDQEQKEVQEQRPDEKYDTILDVNELQGKLKQKITSYLACGNKSADMTLIEYEIDETLDTKKEIIPDKQNFKSETNKSWRRLDRGPYSCANTCTSSCKNSSAKPLVKYEIDETFEIKEEFASDKQDSMDKTNESIGTIDCGPYSFATAYISSCEHSKTKTLLKYETDDTLEIKEEFVLDQETDADQKSNKTYESKVCTVDISDDASLAVQNKLRTHKKQKIHDTDLDRKYKCQKYQKSKKNSKKSRGGHDGPCSYITGDVSSYNNFDANESTSIIKYENDETLEIKKEIEQEQDLSQQMDNIKYETVLFTVDKIEEDVLPAGRKRRQKKQAIQESKQETGKRYKCEKCARIYKHKNSQQSKRKSKKYTRGHGGPYFYITTDISSDNYSDAMTMIEYDIDETLEIKEEVVQGKQTKCKSKKSREHGRPDVSSENNSDTKTVTCIIEYDNDETLEIKEEIIQDQQNKRKSKRYRRSHGGPYSCITGDVSSDNNCDDKKLTCIIKYENDESFKIKEEMIPDPETKEVKVEQTDEENDSKVCTLSIRKAAILDLSKLRTKLKQKITSHISSGSMSAAKTLTEKDIDETFDTKKESIQDQETKNKSKKYTLSHGDASSDNYSKAMPFIEYEMDETLEIKEEFIQDQNTKDIRDQKLDRENDLKVCTVGIRKNDITDLKKLRTKLMPKRTSHIFSGNKSAAKAFVEKDIDETLDTIEEIVQAQRSKKSKKSRGKRGAAYSRTTARTSSGNKSAVKTLIEYDVDETLDIKEEIIEDQQSKCKSKKSRGHGGSDFSSDDNSDTKASICIIKYDYDETLEIKEEIIQDQHNDNTGSKDLTEIWDGEAYSFITAHISSDNNSNPNNSTCGIKYENEETLEIKKEIIQDQPNFNRHSKESTERGDGGSYLFITTDISPDNNSNAKNLACNIQYEHDETLEIKEEIIQDLREAAISEVNKELPKLKQKIQESIPENKYKCEKCARCYKNKGNLTSHQKYECNVGPQFRYQHKATRKSKKSTARWDDGPYSFVTTDISSDNNSNAKSLTYIIKCEYDETLEIKEEFIEDQRTQDQCSSQQFDTQHDSYIIPDNSFENKSNAKDLSYNIKCENGETLEIKEDISEDQGIPREMVTEEFESKMFTLVENDEDVLPANKLQRPKKRKKMQESTPDEKYKCEKCARIYNSKRTLTYHKRYVCDVIPKFTCEYCGRRFKQRCHMTRHVANKHFKTNIETSKIKYKCDKCWRSYKWPDQHTKRKSKKSTGKPFGGTYSCTTTTKVANDNSDTNTLTCMIEYENDGSVEIKEEGIHDQQSVPINAKYFSSTSKKSTRRRDDGPYSALYSVNAKHAENKSKKSRRRRDDEPYSSIHCDHFMAFKTVFLSHEREELNLPSDDNSIIKTLIEYNTDDTLDIKEDIIQGRVINELSKNLRDYPNLPLLKGSADIWVGKRSIQFPFRCDQCGKQYQHRTTLQRHTRHECGKEPRFRCPYCSRRTKQRGNLYQHIRTHHPGKDVFYLSKVFIKEEYPTYQIEPFMIDVRGNDILSVPKRLDDTRMKIAEPRPKQERKHKCDQHNPNISNKYIALAEDSCFLDIKEQNILDDYSTFETREESPNQASEKNPGEQSVLKKALESRSYLHLGKTNRNFESRPCTFQTVYETQVQGMSVNQGRKHKSQKKFQCNMCGRSYVHQPNLSRHKRYEYDPSTPIAAKQNYLKKGRGRPRKGPYICFSCDEVFNYKAPFSKHLKEAHNITPEKVPKTPKKVLPTTKILEKTFESKNQNEFQSEENLKIKEEVIGDEETTSKTVIEPTRDLMKRRRQSEGPYVCSRCSDTFELRACFLKHQREDCVITPSKKRTVKSETKVGAYDQSVSNDPLLPLRNSKKGRGRPSEGPYICPDCGILFPLKVPFVRHQTKECTMRPPRLLQKRGPKIKQTSNDYSNDLATTEEVPITVSPSINILPEILPVKCSHAQKNARCKSRIPVCDPRYPNGNGIVTAPIQRPVAHDAKRPEKSLDVMRRLQDEGMSCCSFLDLTEADLNLMELNMDRTEFVVQEDGSLVSECNDEPNASQRIRVRSDIQEKRNTQSGTGTSKVSLHMFSRFGTVRATLLHRVAEGQALVLAANGSFTENNRRALMRILISELIKVHGSCYPPDEAKVALAQAIVTEFPLLRNTRTKKGYEHYYDEETRRGFIEYRLWNVRRTLSPSQKKYKTKTLDSSKPTPVVSNINLLSQEELDTKIAWMKCTNPSDSNKQNIATHLQETLQNRRDWIIKKSPNISQILHEYPRLLDYNGEMINNEFRYFFKEKSFNFLARFPSYYCPRILEYAKLNRLDVYNRLKNITDVNLRALFILADLLRINNAMLSQQGDKGKGKMKGKKRQRSSDEAEMIEKEKIDVPSTFLVRFVSTFFIIEIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -