Aeri013178.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- -
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000034.1:53393747-53471177[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.29 1.1e+02 5.9 4.0 1 21 286 306 286 307 0.96 2 19 0.00033 0.13 15.1 0.7 1 21 529 549 529 550 0.96 3 19 0.001 0.4 13.6 8.3 1 23 558 581 558 581 0.95 4 19 2 7.9e+02 3.2 0.3 4 14 593 603 593 606 0.82 5 19 0.00077 0.31 14.0 5.3 1 22 712 733 712 736 0.92 6 19 0.00019 0.076 15.9 2.1 1 23 741 764 741 764 0.96 7 19 0.021 8.5 9.4 0.9 1 21 1038 1058 1038 1059 0.95 8 19 0.00091 0.36 13.8 3.2 1 23 1067 1090 1067 1090 0.94 9 19 10 4e+03 1.0 0.5 1 11 1102 1112 1102 1114 0.88 10 19 0.0024 0.96 12.4 2.4 1 21 1234 1254 1234 1255 0.97 11 19 0.00011 0.042 16.7 1.7 1 23 1263 1286 1263 1286 0.92 12 19 0.004 1.6 11.7 0.4 5 23 1520 1539 1518 1539 0.95 13 19 0.011 4.3 10.3 1.4 1 21 1629 1649 1629 1650 0.96 14 19 0.018 7.1 9.7 5.4 1 21 2026 2046 2026 2047 0.95 15 19 0.00023 0.09 15.6 4.3 1 23 2055 2078 2055 2079 0.94 16 19 0.0062 2.5 11.1 3.7 1 21 2235 2255 2235 2256 0.95 17 19 0.0044 1.7 11.6 0.2 1 23 2264 2287 2264 2287 0.93 18 19 7.5 3e+03 1.4 0.2 11 23 2309 2322 2309 2322 0.89 19 19 0.0072 2.9 10.9 5.5 1 23 2329 2351 2329 2351 0.97
Sequence Information
- Coding Sequence
- ATGGAATACGAAAATGAGGAAACTTTGGAAAACAagcaagaaataaagaaagaaaccaCCGAAGatctAGAAGGCTTTTCAGAAACAGCTACGAGACCGAAACTAAATCCAAAATATGAGATAGAACCAGATGGTGGGCCATATTCCTATCCAAATACTGATATTTCTTTTGACGatgAACAAGGCTTTTTAGAAATAACTGCGAGACCGAAAGTAAATCTAAAATGTGAAAACAAATCAGCTGATGGGCCATATTTCGACGCAACTACTGATATTTCTTTTGAGGATAATTCTGGTGCCCAGATTTTCATTGAGTACGCCAATGACGAAACTTtggaaataaaagaagaaatcgcTCCAGCTCAACAAGGCTTTTTAGGAACAACCACTCGACCGAAACCAAATCTAACACGTGAGACAAACCCATATGAGGGGCTATATTCCTCTTTAAGTACAGATATTTCTTCTCACACTAATGCTGGTACCAGGATTTTAATTGAATACGATAATGACGAATCTTTGGAAATCAAAGAAGAAATAATCACAGATCAAGAACATTTTGTACAAATAACACAGGGtcttaaaggaaattcaaaatatgGAACAAGAAGAGCAGGTGGGCTGCGTTTTTCTTTTAACTACGCTGACCTTTTCGAACATAAATCTAAGTTTTTGGGACATCAAAGGGAAGAACATAATCTTCTTTCTGATAGTAATTCTGGTAACAAAACTTTTATTGAATTCGACAATGATGAAACTTTGGGCATCAAGGAAGAAATCATCGAAGataaagagaCTGCTGGCCAAAAAAGGGCTAAAAGGTACAGGTCAAACTCAAAACAGGAACCGAAGATGTACAAGTGTGAAAAGTGTATGCGAAAGTACAGACAGAAAAGATATTTGAGTTATCATCAAAAATACGAATGCGACGTCACGCCACAGTTCAGCTgtcGAGATGGTTCTCTGAAAATAACTAGCAGACTAAATTGTAATCCGACGCGTAGAAAGAAATCCTTTACTACTGTTTGGAAACACCAGAGAGAAGAGCGCAATCGGATTTCTGAAATAAATCAATTGGTAGAAAGCCGTATCTCCTTTGACAATTATCCTGGTACCAAGACTTCAATTGAATATGACAATGATGCAACTTTGGAGATCAAGGAGGAAGTCATACAAGgTCAGGATAGGTCTGCGAAAACAAATAGAAGGCCAAAATGTGATACGAAATGTAGAGTGGAATCGTCTACTAATGTTTTGAGACACCAGAGAGAAGAGCACAatcttatttctgaaataaaccaATTGAACGAAAAACGTAAAGCTACTGATAATTCTTCTTGCAATTATTTCGGTACCAAGACTTCAATTGAATACGACAATGACGAAACTGTGGAAATCAAGGAGGAAATCATCCAAGaTCGAGAGTCTTCCTCAGAGAAAGATGCAAGTCAAAATCGTCATAAAAAATTGGAGTTAATTTTGTGTACTTCAGATATGAGAGAAGATGATACTGTGACTGTTAAGAAACCATGTAGCCAACCGTTGCCAAGAAATCAGGAATCAAAACAGGAACTGCAAAAGAAATACAGATGCGAAAAGTGTGCTCGAAGCTATGTACAGAAATATAATTTGCTGGCTCATCAAAAATACGATTGCAACGTCAGCCCACGGTTCAAATGCAAATTCTGTAACAAACGATTCAAGCGGAAAAGTCACATGTGTAACCATGTGGATAGCATTCATCTTAAAACGAACTTGCAGACATCGAAAACCAGGCATAAATGCGATAAATGTTTCCGAAGTCAAGCTATGTATGTGATAACAACTAGAAGATCAAATTATAATCCGAAATGTGGAGTGAAGTCGTCTACTAATGTTTCGAGAAAGCAAAGTGAAGGGCGgcattttatttctgaaataaatcatTTGGACGATATATGTATAACTCCTGATATTTCTTCCGTTAATTATTCTGGTATCAAGACTTCAATTGAATACGACAATGACGAATCTttggaaatcaaggaagaaaGCATCCAAGATGTAAGCAAAGATTATATTTTGTCCGATAGCAAACCGCAGAGCCAAGCGACGCCGAAAATTCAGGAATCAAAACAGAAATCACAAAAGAAGTACACATGTGAAAAGTGTGCACGAAGCTATTCACAGAAACATAATTTGACTGCTCATCAAAAATACGATTGTCACGTTACTCCACAGTTCAAATGTCAATTGTGTGACAAACGATTCAAGCGGAATCCTCACGTGCTGAGGCATGTGGCTCGCGTACACCTTAAATCGACCGTGCAGATATCGAAAACCAGACACAATTGCGATAAATGTTCGCAAAATCAAGATAGTTATCCGAAAATAACTTCAAGTCCAAATTGTAATCCGAAATGTGGGACGAAATCGTTTACTAATGTTCGGAGATATCAGAGAGAAGAGCACAATCTTATTTCTGAAAGAAAGGAATTGGACGAAAGATGTGTAACTGCTAATATTTCTTTTGCCAATTATTCTGATACCAGGACTTCTCTTGAATACGATAATGACGAAACTttggaaatcaaggaagaaaTCATCCAAGgacaAAAAGGCTTTTTGGAAAGAACTAGGAGACTAAGGCGAAATCCAAAATTTAGGACAAAACCAGATGGTGGGCCATATTCTTGTACATCTACTGAAGTTTCTTCTGACAAATATCCTGGTACCACGACTTCAATTGCATACAAAAATTACGAAAGCATGGAAATCAAGCAAGAAGTCCAGGATGAAATCACCGAAGAACAAGATAGTTCTCTGCAAGGAACTGCGAGtccgaaatatattttgaaatgtgGGGCAAAACTAGACGTTGGGCCATATTCTTGTACATCTAAGGATATTTCTTCTGACAATTATCCTCGTACCACGATTGAATACGAAACTGACGAAACATTAGAAATCAAGGAAGAAATCATCCAAGGTGACGAGACGAAGGAACTTACGGATGAAAATTATGATACAAATGTATGCACCGCAGATATAAGAGGCTCTTCTATTTTCGCGGTTAACAAACTGCAGACCATAAAGAAGGAAAAAATGCAGGATTCAAAACGGGAAATGAAGTACACATGTGAAAAGTGTGCGCGAAGCTATAACCTGAGATCAAGTTTGTGGAATCATAAAAAGTACGATTGCGACGTCAGGCCCCAGTTCAGATGTCCATTCTGCGACAAactatttaaacagaaaaatcacaTGAAGAATCATGTAGTTCGCGTGCATCAGGAAAAGGACTTGAAGGCATCACAAACTAGGTTTAATTGCGACAAATGTTCACGAAGTTACCGTTGGGATAAAGATCAAGATAGTTCTTCGAAAGCAACTGCAACATCGAAATATTATCCGAAATGTGGGAGAAAACCAGATTCCAGGCTATATTCTCGTACCGCTACTAATATTGCTTCTAACAATTATTCTGATGTGAAGACTTCAATTGAATACGATAATGATGAAAGTTTAGAAATCAAGCAAGAAATCAAGGAAGAAATCACCGAAGATCAAGAGATCAAAGAGGAATCGGACCAAGAACTTGATGAACAATATGCAACCAACTTATGTACTGTATACATAAAAGAAGATAATATTTTGACTGATAACAATCTCCAGAGTCAAAAGAAGCCGAGAACTCGGAATTCAAAACCGGAAAAGAAATACAAATGTGAAAAGTGTGTGCGAAGCTATACCCAGAGACAGAGTTTGTTTAATCATCAAAAATTTGAATGCGCCGTTAATCCACAGTTCGTATGTACATTATGCGGCAAACAATTTAAACGGAAAAATCACATGAGTCGCCATGTGGGTGTTGTGCATGATAAAACAAACTTACAGACACCAAAACCGAAGCATAATTGTAACATATGCTCTGCTAGTTATGGTCTACAGACCAATAGTGAATTGAAGAAATTATCCGGAAGAAAGGATGATGGGCCAACTAGCACTCAAGTTTCTTCTAGCAATCAGTCGGGTGCTAAGACTATCCAATGCGACATTGATGACCATTTGGAAATCAAGGAAGAATCCATCGAAGATCCGTCAAATTTTTGTACCGTATATGtaaaagaaaatgatattttggaGGTTAGACCGAAACCGGAGACCATAAAGGAGCAGCAAATTCAGGAAACAGAACCGGAAAGGAATCACACATGCAAAAAGTGTCAACAGTGTTCCCAGAGTGAATCGAAGGAATCGACAGGAAGAGGGATTGGGGGGCCATATTCGTGTACAACTACTGGCAATAAGTCTGGTGCCAAGACTTTAATAAAATACGACCATGATTGCAATTTGGAAATAAAGGAAGAATTGATCCAAGATAAACGAAATTACAAGAGGAAATCAAAAAAGGCAACAGGAAGACGGGATGGTGGACCATATTCTCGTACAACTACGAGCCTTTCTTCTGACAACAAGTCTGGTACGAAGACTTTAATTGAATACGATATTGACGAAACTTTGGAAATCAAAGAAGAAATCATTGATGAAAAGCAAGGTGGTCGACATATCTCTTTTCACTGTGGTTATTCATTCGAAAATAAACCTGGTTTGTTGAAACACCAGAGGGAAGAGCACAGTCTTATTTCTGGCAAAAAGAAATTTGACGTAAAATGTACTAGTGAAACTTCCTCTGCGAATAAATCTGGTGCCAATACTTTAATGGAATACGATAATGACGGAGCTttggaaatcaaggaagaaaTAATCCAAGATAAAGAAGCAAAGGAAGTTATGGGCCAAAAACGTGctgaaaaatttaagtcaaaagtAACCATCGTAGATATCACAGAACTGCGAACCCAGCATAAGAGGGAAATTCAGGAATCAAGACCGGGAAATAGGTACACGTGCGAAAAGTGTGCGCGAAGCTATAGCCAGAAAAGTATTTTGAATCGTCATAAAAGATTTGACTGTGGCGTCATGCCGCAGTTCAGATatCAAGAAACTTCTTTAAATACAATTACGAGACGGAAAGGAAATCTAAAATATGGAACAGAAACAGAAAGTGGGCTAAATACTTCTTTCCACTGTGGTTATTTTATTGAATGTAAACCTGATTTGTTGAGACACCAGAGGGAAGAGGACAGTTTTACTTCTGACAAAACTAAATTGGACGAAAAATATACAACTAGGGAAACTTCTACGGATAATAAATCTTTTGTCTGGAGGTCAATGCAACACGACAATGACGAAGCTTTGGAATTTAAGGAAGAATTCGCACATGatcaagagAAAAAGGAAGTTACGGGCCAAAATCGCGATGAAAAACTTAAGTCGAAAATAACAGTTGTAGATATAAGAGAACTGCGAGCCCAAAATAAGGAGAAAATTCAGGAATCAAAACCGGAAAATAGGTACACTTGTGAAAAGTGTGCGCGAAaTAAAGAAACTACGTTAGAAACAACTACTACCGGGAAAGGTAAACCAAAATATCGAGCAGGAACAGTAGGTGGGCTACATACTTCTTTTCaatgtgtttatttttttgaaaataagccAACTAGTGAAAAATCTTCTGTCAATAATTCTGGTGCTAAGACTTTAATTGAGTACGATAATGACGGAACGTTAGACATCAAGGAAGAAATAGTTCAAGataaagaaacaGAGGGAGATAAGGGCCGAAAATCCGATGAACAATTTGATTCAAAAGTTTCCATCGTACATAAAAGAGAAGATGATATTTTGGATGCTAAAAACAAACAGCGAGCCAAAAATAAACAGAAACTTCAGGAAGCAGAGCAGGAACCGGAAAAGAAGTACAAGTGCGAAAAGTatcaaaagaaGTCCAAGAGTAAGCCAAAGAAATCAAGAGTAAGACGAGATTGTGGGCCATATTCTTCTACAACCATAGACATATCTTCTGGCAATAATTCTGATGCCAAAGCTTCCCTAATTAAATACGAAGTTGACGAAACTTTGGATATCAAGCAAGAAATCAATCAAGATGTAAGAGAAGATATGTTAACTCTTAAGAAGGAATTGCGGAGCCCAAAGAAGAACAAAATTCAGGATTTAAAACCGGAAAAGAAGTACAAATGCGAAAAGTGTGCGCGATGTTATATCAAAAAAGGTCATTTGACTCGTCATAAGAAATTCGAATGCGACGTCAAGCCACAGTTCACTTGTCAATTCTGCGGCAAAAGCTTTAGGCACAAAAGGAACATAATTCGCCACGTGGATGTTTTACATCATAAAAAGAACGTACAGACAACGCGAAAGAGTTATAATTGCGATGAATGTCCTCGAAatcaaaggaatttcaaaagtgCTTTTAAGAAATCAAGAGGAAGACCAGATGGTGGGCCATATTCTTGGACAACTACCGACATATCTTCTGACAATAATTATAATGCCGAAAATTTAGCTTGCATACTTAAGTACGAAAATGACGAAAATCTAGAAATTAAGGAAGAAATTGGCCAAGATCAAAAGAATATCAGAAGTGAGTCAAAGAAATCAACAAGAAGACAAGTTCCTTGGACATATTCTTGTATAACTACTGAAATTCCTTCTGGCTATAATTCGGATGCCAAGATTTTAGTCGAATACGCCTATGATGAAACATTGGAAATCAAGGAAGAAGTAAACTTAGatccAGTTATTGCTCAAAGAAAGGTTCATAAAGTTCAGGTATCAAGCCTAGCCCCGGGAAAAGAGTTCAAATGCGAGACGTGTGCTCGAACCTATAAACGGAAAGAAAGTCTGCATCgtcataaaaaatacgaatgcAACGTCATGCCACAATTCATATGTGAATTATGTGGCAAACGATTTAAATTAAAGCAGGGCATGAATATTCATGTACTTAATGTGCATCTCAAGAAAACGTTAAAGAACTCGGAGTTAAGTAATAATTGCGACAAAAGTCCTGGAAGCAACACTTCGCCGAAAGATTTAACTCGACATAAACGTGTAAAACATGCAGCAGAAAAACCACAATTTACTTGCGACTATTGTGACCACAAAACCAAGCGCAAATTTGACCTGATAAAGCATTTTTTACGTCATAATAGATAA
- Protein Sequence
- MEYENEETLENKQEIKKETTEDLEGFSETATRPKLNPKYEIEPDGGPYSYPNTDISFDDEQGFLEITARPKVNLKCENKSADGPYFDATTDISFEDNSGAQIFIEYANDETLEIKEEIAPAQQGFLGTTTRPKPNLTRETNPYEGLYSSLSTDISSHTNAGTRILIEYDNDESLEIKEEIITDQEHFVQITQGLKGNSKYGTRRAGGLRFSFNYADLFEHKSKFLGHQREEHNLLSDSNSGNKTFIEFDNDETLGIKEEIIEDKETAGQKRAKRYRSNSKQEPKMYKCEKCMRKYRQKRYLSYHQKYECDVTPQFSCRDGSLKITSRLNCNPTRRKKSFTTVWKHQREERNRISEINQLVESRISFDNYPGTKTSIEYDNDATLEIKEEVIQGQDRSAKTNRRPKCDTKCRVESSTNVLRHQREEHNLISEINQLNEKRKATDNSSCNYFGTKTSIEYDNDETVEIKEEIIQDRESSSEKDASQNRHKKLELILCTSDMREDDTVTVKKPCSQPLPRNQESKQELQKKYRCEKCARSYVQKYNLLAHQKYDCNVSPRFKCKFCNKRFKRKSHMCNHVDSIHLKTNLQTSKTRHKCDKCFRSQAMYVITTRRSNYNPKCGVKSSTNVSRKQSEGRHFISEINHLDDICITPDISSVNYSGIKTSIEYDNDESLEIKEESIQDVSKDYILSDSKPQSQATPKIQESKQKSQKKYTCEKCARSYSQKHNLTAHQKYDCHVTPQFKCQLCDKRFKRNPHVLRHVARVHLKSTVQISKTRHNCDKCSQNQDSYPKITSSPNCNPKCGTKSFTNVRRYQREEHNLISERKELDERCVTANISFANYSDTRTSLEYDNDETLEIKEEIIQGQKGFLERTRRLRRNPKFRTKPDGGPYSCTSTEVSSDKYPGTTTSIAYKNYESMEIKQEVQDEITEEQDSSLQGTASPKYILKCGAKLDVGPYSCTSKDISSDNYPRTTIEYETDETLEIKEEIIQGDETKELTDENYDTNVCTADIRGSSIFAVNKLQTIKKEKMQDSKREMKYTCEKCARSYNLRSSLWNHKKYDCDVRPQFRCPFCDKLFKQKNHMKNHVVRVHQEKDLKASQTRFNCDKCSRSYRWDKDQDSSSKATATSKYYPKCGRKPDSRLYSRTATNIASNNYSDVKTSIEYDNDESLEIKQEIKEEITEDQEIKEESDQELDEQYATNLCTVYIKEDNILTDNNLQSQKKPRTRNSKPEKKYKCEKCVRSYTQRQSLFNHQKFECAVNPQFVCTLCGKQFKRKNHMSRHVGVVHDKTNLQTPKPKHNCNICSASYGLQTNSELKKLSGRKDDGPTSTQVSSSNQSGAKTIQCDIDDHLEIKEESIEDPSNFCTVYVKENDILEVRPKPETIKEQQIQETEPERNHTCKKCQQCSQSESKESTGRGIGGPYSCTTTGNKSGAKTLIKYDHDCNLEIKEELIQDKRNYKRKSKKATGRRDGGPYSRTTTSLSSDNKSGTKTLIEYDIDETLEIKEEIIDEKQGGRHISFHCGYSFENKPGLLKHQREEHSLISGKKKFDVKCTSETSSANKSGANTLMEYDNDGALEIKEEIIQDKEAKEVMGQKRAEKFKSKVTIVDITELRTQHKREIQESRPGNRYTCEKCARSYSQKSILNRHKRFDCGVMPQFRYQETSLNTITRRKGNLKYGTETESGLNTSFHCGYFIECKPDLLRHQREEDSFTSDKTKLDEKYTTRETSTDNKSFVWRSMQHDNDEALEFKEEFAHDQEKKEVTGQNRDEKLKSKITVVDIRELRAQNKEKIQESKPENRYTCEKCARNKETTLETTTTGKGKPKYRAGTVGGLHTSFQCVYFFENKPTSEKSSVNNSGAKTLIEYDNDGTLDIKEEIVQDKETEGDKGRKSDEQFDSKVSIVHKREDDILDAKNKQRAKNKQKLQEAEQEPEKKYKCEKYQKKSKSKPKKSRVRRDCGPYSSTTIDISSGNNSDAKASLIKYEVDETLDIKQEINQDVREDMLTLKKELRSPKKNKIQDLKPEKKYKCEKCARCYIKKGHLTRHKKFECDVKPQFTCQFCGKSFRHKRNIIRHVDVLHHKKNVQTTRKSYNCDECPRNQRNFKSAFKKSRGRPDGGPYSWTTTDISSDNNYNAENLACILKYENDENLEIKEEIGQDQKNIRSESKKSTRRQVPWTYSCITTEIPSGYNSDAKILVEYAYDETLEIKEEVNLDPVIAQRKVHKVQVSSLAPGKEFKCETCARTYKRKESLHRHKKYECNVMPQFICELCGKRFKLKQGMNIHVLNVHLKKTLKNSELSNNCDKSPGSNTSPKDLTRHKRVKHAAEKPQFTCDYCDHKTKRKFDLIKHFLRHNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -