Aeri013181.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- -
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000034.1:53497618-53562889[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 1.5 5.9e+02 3.6 0.6 1 13 13 25 13 29 0.86 2 27 0.93 3.7e+02 4.3 3.4 1 21 134 154 134 155 0.95 3 27 0.43 1.7e+02 5.3 0.4 1 15 163 177 163 180 0.88 4 27 0.33 1.3e+02 5.7 4.6 1 21 284 304 284 305 0.96 5 27 0.062 25 8.0 8.6 1 23 313 336 313 336 0.92 6 27 0.016 6.5 9.8 3.3 1 23 348 371 348 371 0.93 7 27 0.15 60 6.8 0.1 1 23 378 401 378 401 0.96 8 27 0.13 51 7.0 4.7 1 23 409 432 409 432 0.95 9 27 0.0017 0.67 12.9 2.3 2 23 440 462 439 462 0.94 10 27 0.0032 1.3 12.0 5.1 1 23 470 493 470 493 0.97 11 27 1.2 5e+02 3.9 0.4 3 23 502 523 501 523 0.96 12 27 0.034 14 8.8 1.5 1 21 661 681 661 682 0.96 13 27 0.049 19 8.3 3.8 1 23 690 713 690 713 0.94 14 27 0.15 60 6.8 2.9 1 20 725 744 725 746 0.94 15 27 0.0014 0.55 13.2 3.3 1 21 964 984 964 985 0.95 16 27 1.7e-05 0.0066 19.2 2.8 1 23 993 1016 993 1016 0.97 17 27 0.01 4.1 10.4 3.3 1 23 1028 1051 1028 1051 0.93 18 27 0.37 1.5e+02 5.5 3.4 1 21 1178 1198 1178 1199 0.95 19 27 1.8e-05 0.0071 19.1 1.2 1 23 1207 1230 1207 1230 0.97 20 27 0.016 6.3 9.8 5.2 1 23 1242 1265 1242 1266 0.93 21 27 2.8e-05 0.011 18.5 3.0 1 21 1392 1412 1392 1413 0.97 22 27 0.026 10 9.1 2.5 1 15 1421 1435 1421 1438 0.92 23 27 0.031 12 8.9 4.7 1 21 1540 1560 1540 1561 0.94 24 27 0.19 76 6.4 2.0 1 14 1569 1582 1569 1586 0.90 25 27 0.041 16 8.5 2.4 1 21 1802 1822 1802 1823 0.95 26 27 1.6 6.2e+02 3.6 1.5 1 13 1831 1843 1831 1847 0.86 27 27 0.1 40 7.3 1.8 1 21 1963 1983 1963 1984 0.95
Sequence Information
- Coding Sequence
- ATGACCTCACACCACTTAAAGACATCACAATCTCAGCATACATGCGACAAGTGTTCGCGAAGTTATCGCTCGTTAACTGATCAACATCATTCCAAGACTGAATTGAAGAAATCGACAGAAATACCAGATGATGGCCCTGATCCTTGTACAAGTATTAACATTTCTACTGGCAATAATTCAGTTgataagattttaattgaatacGACATGGATGAAACTCTGGAAATCAAGGAAGAATTCATCGAAGaTCCCCTGACAATTACAGACTCGATATCTTATGAAACATATGATTCGGAATTCTGTAACGTGGATATAAAAAGCGATGAGATTTTGGCTGTTAAACCCAAACTGCTGACCCGAAAGAGTCAGGAGATCCATGAATCAAAAGAGGAAAAGAAGTACAAATGCGAAAAGTGTGCGCGAACTTATAAATGGAAACAAAGTTTCAATCACCATCTAAAATACGAATGCGGCGTCAGGCAACAGTTCCAATGTGAATTATGCAGCAAACAATTTGTACACAGAGGTGATCAACAGAATTCCAAGACTGAATCGAAGAGATCAACAGAAAGACCAGATACTAGGCCACATTCTTGTACAAGTATTTACATTTCTACTGGCAATAATTCTGATGCCAAGACTTTCATCGAGTACGATAATGATGAAACTCTAGAAATTAAGGAAGAATTCATTCAAGaTCCTCTAACAATTACAGACCAGATATCTTATGAAACATATGAGTCAAAATTCTGTAACGTAGATATCAGAAGCGATGAGATTTTGGATGTTAAGCACAAACTGATGACCCTAAAGAATGAGGAAATCAAGAAATCAAAACAGGACAAGAAGTACACATGCAAAAAGTGTTTCCGGAGATATAAGTGGAAACATAATTTAGATCGACATCTAAAATACGAATGCGACGTCAGGCCACAGTTCAAATGTAAATTCTGCAAAAAACGCTTTGTACATAAAAGTCATTTGATTTGCCACGTAAATCTTTtacatattaaaacaaaattaggaaGATCGGGAAGGAAGCATAAATGCGAGCAATGCCGTCGAGTATTTATTTCACCAAGAGCTTTAAACCTGCATAAGCATTTAAAACATGCAACAGTCAACCCCCAATTTGTTTGCGATTTTTGCGGATATAAAGCGATTGCGAAAAGGTATTTGGCAGATCATATGACTGTACTTCACTTAGAGACATCGGAACAAAGGCACAATTGCGACAAATGTTTCCGAAGTTATCGTTCGTTAAGTGGCCTACATTATCATAACCGAGTAGAACATCCAGAAGTCAAACCACTAATCAGTTGCGATTATTGCGGGTATAAAAcgattaataaatataatatgtcGAGACATATGTCTTTATGCCACTCGCAGGCATCGTCATTAAGGCATAAATGTGAAAAGTGTTCTCGAAGTTATGCTACTAAAGGTCGTTTAACCCATCACAAACGTGTAGAACATGCAGCCATCAAACCACAGTTACTTTGCGATTTTTGCGattataaaactaatttgaaaGGTGTCTTGTCCAGACACATAGCTTCACGCCACACAAAGACATCGAAATCCATGTATAAATGCGATGAATGTCCTCGAAATCTACTCAATTTCAAGAGAGAGCCGATAGAAACAAATGTAAGAGATGATGATGTACCATATTCTTGTACTATTTTGGACATCAACAAGCTGCGGTCCAAACTGAAGCAAAAAATAACTTCTCACAGTTCTTCTGGCAGTAAGTCTGCAGCCAAGATTTTAATTGAATACGACATTGACGAAACTTTGGATATCAAAGAAGAATTCATACGAAatccAGAGGAAATTGCAGTTCCGGAACTGAATGAAACAGATGAGTCAAAAATTAATACCGAAGATATAAGAAGAGCTGATAAATTGACTGTCAGAAGAAAATTATGTACCGATAAGAAGCAGAAAATCCGGGAATCAAGACCGGAAAAGAAACATAAATGCGAAAGGTGTGCGCGAAGCTATACCGGACGTAGAGCTTTGAGAAGTCACCAAAGATTCGAATGTGGCGTCAGTCGACAGTTCAGATGCAATTTCTGCAGCaaacaatttaaacttaaaaatcacATGATTATGCACGTGAATCAAGTACATACTAAAACAAAATTACAGGCACCGGGAACGAGGTATAATTGCGAGAAGTGCCCTCGAAGTTATAGATCGATAAATGGCTTGTGTCAACATAAACATCAACAGAATTACAAGAATGATTCGAAGAAATCAACAGAAGGACCAGATCGTGGGCCCTATCCTTGTACAAGTATTAAAATTTCTCCTGTCAATAATTGTGGTGTTAAGACTTTATTCGAGTACGATAATGATGAAACTCTGGAAATCAAGGATGAAATAATCCAAGATGAACAAAAATTCCAGAGAGAGTCAAAGAAGTCAATTGGAATAGAGCGTGGTGATCCATATTCTCGTACAACTATTTACATTTCTCCTGCCAATAATTCTGATGTTAAGACTTTAATTGAATACGAGAATGATGCCTCTTTGGATATCAAGGAAGAAGTCATTCAAGATCAACGGAATTCCAAGTCCGATTCGAGGAAATCGACACCACGACTAGATGGCGGGCCATATTCGAGTACAGCTACTCAAATTTCTTCTGGCAATAAGTCTGGTGACAATACTATACAATACGGCATTCATGACCCTTTGCAGATCAAGCAAGAATTCATCCAAGattcagAGACGATTCCAGCCCATAAAGAAAATCAATCAAATGAGTCAAAATTTTGTACCGTATATATAAATGAAGATGATATTTTGGAGGAGGTTAAGCCCAAACCCCAGGCCATAAAGAAAGAGCAAACTCAGGAGCCAGAAAAGGAAAAGAAGCACACATGCGAAAAGTGTGCCCGCAGCTATAAACGGAAAGGTCATTTGAATCAACATTTAAAATACGAATGCGACGTCACGCTACAGTTCAGATGTAAATTTTGCGAAAAACAATTTAAACGGAAAGGTGACGTTAATAGGCACATGCGTCAAGTACATATTAAGATAGACTTACAGTCATCAAAATCAATGCATGATTGCAACAGATGTTCGCGAAGTTACTCTTCGTTAGATGAGTTCAAGCGACATAAACAGCTAGAGCATGCAACAGTCAGAACACAATTTTTTTGCGATTATTGCGGATATGAATCGAATATGAAAGatcaaaagaattccaaaactTATTCGAGGAAACTGAAAGAAATACTAGATGTTGGGCCATATTCTTGTACATCTACTCAAATTTCTTCTGGTGATGAAGCTGATCCCAAGACTTTCATTAAATACGACCTTGATGACAGTTTGGAAATCAAGGAAGAATTCATCCATGATACTGGAAAAATTACAGCACATAAAGGAAATAAATCAAATGAGTCAATATTCTGTACCGTATATATAGAAGAAGATGATATTTGGGAGGTTGAGCCCAAAACGCAGACCATCAATAAGCAGAAAATTCAGGTAGCAGAACAGGAAAAGAAGCACACATGTGAAAAGTGTGCCCGCAGCTATAAATGGAAACGTCATTTGACTAATCATTTAAAGTACGAATGCGGCGTCAGGCTACAGTTCAGATGTAATATCTGTGAAAAACAATTTAGACGGAAAGGTGACGTGAGTAGGCACTTGCGTCAAGTACATTTTAAGCCACATTTAGAGACATCGGAATCAATGCATAATTGCAACAAATGTTCGCAAAGTTACACTTCATTACGTGACTTAAATCGACATAAACAATTAGAACATCATGCAGCCAGACCATTATTATTTTGCGATATTTGCGGATATAAATCGAATATGAAAGatcAACAGAATTCCAAGACTGATTTGAGAAAATCAACAGAAAGACCAGATGCTGTGCCAAATTTGTGTAAAACTACTGACATTTCTTCTGGCAATAAGTCTGGTgccaaaactttaattaaatacgACCTTGATGACACTTTGGAAATCAAGCAAGAATCCATCCAAGgtcCAGAGACAATTGCAGCCCAGAAACGAAATGAAACAGACGAGTCAAAATTTTGTACCGTATATATAAAGGAAGATGATGATTTGGAGGTTCAGCACAAACCTCAGTCCATAAACAAGCAGGAAAATCAGGAATCAGAACAGCAAAAGAAATACAAATGCGAAAAGTGTGCCCGCAGCTATAAACGGAAAAGTCATTTGAATCAACATATAAGATACGAATGCGACGTCAAACTACAGTTCAGATGTAAATTCTGTGGAAAACAATTTAAACGGAAAGATCAACAGAATTCCAAGACTGTTTCGAGGGAATCGACAGAAAGACTAGATTGTGAGCCGTATTCTTGTACAACTACGCCCATTTCTTCTGACAATAAGTCTGATGCCAAGACGACAATTCAATACGACACTCACGACCCTttggaaatcaaggaagaaaTTATCCAAGatcCAGAGACAATTACAGCTCATGAAGGGAATAAATCAAATGAGTCGAAATTTTGTACCATATATATACGAGATGATATTTTGGCGGTTAAGTCCAAACCGCAGACCATAGAGAAGCAGAAAAGTCAAGGATCAGAACAGGAAAAGAAGTACGCATGCGATAAGTGTGCCCGCAGTTATAAACATCAACGTCATTTGTACCGccataaaaaattcgaatgcgaCGTAAGACCACAGTTCCAATGCGAATTCTGCAACAAACGATTCGCTCATAAAAGGGatCAACACAAGTCTAAGAGGAAGTCGAAAATATCAATATCAAAAAATGGTGATGGGCCATATTCTTGTACCACTACTAATATTTATTCTGCCAACAGTTCTGGTGCCAAGACTATAATTGAATACGACATGGATGTAACTTTGGTTATCAAGGAAGAAATAATCCAAGATCAACAAAGTTCCAAGACTGAATCAAAGAACTCAACAGATAGACTATATAGTGAGCCATATTCTTGTACCACTATTAACATTTCTTCTGGAAATAATTCTGGTGCAAAGACTTCAGTGGAATACGATGATGATGAAACAttggaaatcaaggaagaaaTCATCCAAGATCAACATAATTACAAGAGAGAGTCGAAGAAGTCAATAGAAAGAGAACATGCCGTCCCATATTCTTTTACAACTACTTATATAGCTTCTGCCAATAATTCTCCGTCAAAGACTTTAATTGAATACGACACTGAGGAAGCTTTGGATATCAAGGAAGAAATCCTCCAAGTTCCGGAAAAAACTACAGTCAATGAATGGATTAAGACAgaggatttaaaattgtataccGTAGACATGAGTAGAGATGCTATTTTTACTGTCAAGAACGAATTCCATACCCATGAGAAGCACGAAATTCAGGAATCAAAACCGGAAAAGAAACACACATGCGAAAAGTGCGCGCGAAGCTATAGGCGGAGACAAGGTTTGTACAGCCATCAAAAATTCGAATGCGACGTCAACCCACAGTTTTTATGTAAATTCTGCAACAAACGATTTGCACACAAATTTCGCATGAGACCTTCGAAAAAATCAATAGTAGCAGATGAGGATGGGCCATATTCTTGCAGAACTGCTCAAATTTCTTCTGACAATAAGTCAGGTGTTAAGACTTTAATTGAATACGACACGGATGAAACTTTGATTATCAAGGAAGAAATCATCCAAGTTCCATTTTGGAGCGAGTATGCAGCCTTCCAGGAAGAAATAGCTGTTCGACAAGCAGCCGACTTGAAGAAAGCTGTCAGCAATATTCAGCAGCCTGGTGaggTACAGTTTACTCCGTTTCTGCCTTTCGCAGCGAGAAGAGCTCGAGCGTATCGTCGTCGAGTTCCCACTCAAAGGCGTGACTATGAGGGACAGCTGTTTCCTTGCTCGGCTTGTCCAAGTACTTTTCGACACATATATAATTTAAGATATCACTTAAAACACGAGTGTGGAAAGTCGCCCCGCTATGCATGCCCTTATTGCATTTTTCATCGTACAAAGCATATCTCGAATGTACGAGCTCATGTCCGCAGAAAACATCCTGGACACGAGGTCTATGCTATTGATCTTTTTAACGACGAGTGA
- Protein Sequence
- MTSHHLKTSQSQHTCDKCSRSYRSLTDQHHSKTELKKSTEIPDDGPDPCTSINISTGNNSVDKILIEYDMDETLEIKEEFIEDPLTITDSISYETYDSEFCNVDIKSDEILAVKPKLLTRKSQEIHESKEEKKYKCEKCARTYKWKQSFNHHLKYECGVRQQFQCELCSKQFVHRGDQQNSKTESKRSTERPDTRPHSCTSIYISTGNNSDAKTFIEYDNDETLEIKEEFIQDPLTITDQISYETYESKFCNVDIRSDEILDVKHKLMTLKNEEIKKSKQDKKYTCKKCFRRYKWKHNLDRHLKYECDVRPQFKCKFCKKRFVHKSHLICHVNLLHIKTKLGRSGRKHKCEQCRRVFISPRALNLHKHLKHATVNPQFVCDFCGYKAIAKRYLADHMTVLHLETSEQRHNCDKCFRSYRSLSGLHYHNRVEHPEVKPLISCDYCGYKTINKYNMSRHMSLCHSQASSLRHKCEKCSRSYATKGRLTHHKRVEHAAIKPQLLCDFCDYKTNLKGVLSRHIASRHTKTSKSMYKCDECPRNLLNFKREPIETNVRDDDVPYSCTILDINKLRSKLKQKITSHSSSGSKSAAKILIEYDIDETLDIKEEFIRNPEEIAVPELNETDESKINTEDIRRADKLTVRRKLCTDKKQKIRESRPEKKHKCERCARSYTGRRALRSHQRFECGVSRQFRCNFCSKQFKLKNHMIMHVNQVHTKTKLQAPGTRYNCEKCPRSYRSINGLCQHKHQQNYKNDSKKSTEGPDRGPYPCTSIKISPVNNCGVKTLFEYDNDETLEIKDEIIQDEQKFQRESKKSIGIERGDPYSRTTIYISPANNSDVKTLIEYENDASLDIKEEVIQDQRNSKSDSRKSTPRLDGGPYSSTATQISSGNKSGDNTIQYGIHDPLQIKQEFIQDSETIPAHKENQSNESKFCTVYINEDDILEEVKPKPQAIKKEQTQEPEKEKKHTCEKCARSYKRKGHLNQHLKYECDVTLQFRCKFCEKQFKRKGDVNRHMRQVHIKIDLQSSKSMHDCNRCSRSYSSLDEFKRHKQLEHATVRTQFFCDYCGYESNMKDQKNSKTYSRKLKEILDVGPYSCTSTQISSGDEADPKTFIKYDLDDSLEIKEEFIHDTGKITAHKGNKSNESIFCTVYIEEDDIWEVEPKTQTINKQKIQVAEQEKKHTCEKCARSYKWKRHLTNHLKYECGVRLQFRCNICEKQFRRKGDVSRHLRQVHFKPHLETSESMHNCNKCSQSYTSLRDLNRHKQLEHHAARPLLFCDICGYKSNMKDQQNSKTDLRKSTERPDAVPNLCKTTDISSGNKSGAKTLIKYDLDDTLEIKQESIQGPETIAAQKRNETDESKFCTVYIKEDDDLEVQHKPQSINKQENQESEQQKKYKCEKCARSYKRKSHLNQHIRYECDVKLQFRCKFCGKQFKRKDQQNSKTVSRESTERLDCEPYSCTTTPISSDNKSDAKTTIQYDTHDPLEIKEEIIQDPETITAHEGNKSNESKFCTIYIRDDILAVKSKPQTIEKQKSQGSEQEKKYACDKCARSYKHQRHLYRHKKFECDVRPQFQCEFCNKRFAHKRDQHKSKRKSKISISKNGDGPYSCTTTNIYSANSSGAKTIIEYDMDVTLVIKEEIIQDQQSSKTESKNSTDRLYSEPYSCTTINISSGNNSGAKTSVEYDDDETLEIKEEIIQDQHNYKRESKKSIEREHAVPYSFTTTYIASANNSPSKTLIEYDTEEALDIKEEILQVPEKTTVNEWIKTEDLKLYTVDMSRDAIFTVKNEFHTHEKHEIQESKPEKKHTCEKCARSYRRRQGLYSHQKFECDVNPQFLCKFCNKRFAHKFRMRPSKKSIVADEDGPYSCRTAQISSDNKSGVKTLIEYDTDETLIIKEEIIQVPFWSEYAAFQEEIAVRQAADLKKAVSNIQQPGEVQFTPFLPFAARRARAYRRRVPTQRRDYEGQLFPCSACPSTFRHIYNLRYHLKHECGKSPRYACPYCIFHRTKHISNVRAHVRRKHPGHEVYAIDLFNDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -