Basic Information

Insect: Acraspis erinacei
Gene Symbol: PLAGL1
Assembly: GCA_035041075.1
Location: JAWWLR010000158.1:90656297-90666364[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00032 0.13 15.2 0.3 2 23 350 371 349 371 0.97

2 5 0.00016 0.064 16.1 0.9 1 20 379 398 379 402 0.95

3 5 0.00014 0.056 16.3 2.6 1 23 443 465 443 465 0.98

4 5 1.4e-06 0.00055 22.6 1.5 2 23 505 526 504 526 0.97

5 5 9.5e-06 0.0038 20.0 0.5 1 23 531 554 531 554 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00032	0.13	15.2	0.3	2	23	350	371	349	371	0.97
2	5	0.00016	0.064	16.1	0.9	1	20	379	398	379	402	0.95
3	5	0.00014	0.056	16.3	2.6	1	23	443	465	443	465	0.98
4	5	1.4e-06	0.00055	22.6	1.5	2	23	505	526	504	526	0.97
5	5	9.5e-06	0.0038	20.0	0.5	1	23	531	554	531	554	0.96

Sequence Information

Coding Sequence: ATGCAGGGTGAAAGAGATAGGGGACAGCGGGGTTCCCACTACCACATTTATTCCCCGATCTTACGAGAGTATCGAGAGATCCGTAGCGTTTACGGCCAAAGAGAAAACTCTTGTCCCGGTTCGGGATGTGAGGACTCTTGCCCGGTTCGGGAGGTGAGGACTTCCTCCCTCAAATGGAATTACTTGTGCAGACCAAGGAATAGCTCCTGGCTACTAAGTTCGTTCCCAAAGCCTAGAGAAAATGATCCGGGGTCATCCCTGGCTCTGGAGGCATCCCTGGTTTCCATCCAGGTTCCGGGACTATTGGAGACAGCATACGGAAAGACGGGAACCAGATTCAAATTCGAATCTCGATTCGTGATTTTGAGCaTGCAAGAAGGAGATGGATTACCCACAATCATCTGCCTTAATTGCCGTCATCTTGTTGACATATCATTCGATTTTAAATGCCAAGTAGAGCAATCGGATACAAAATTACGACACGCTTTGTTATCTAAAGAAACAACATTATCACTAACCCATTCGATTAACAAAGTTATAGCAGAAGCTGTATCGGAAGAATTCCCACAGCAAGGCATTCATTGCAATGTTGAAAATAACAGTGAGCCTCTGAGTGATATTAGCTCAAGAAACATTGATCATTTTGCCGTTCAGACAAATGAACATCTAGCTCTAGCATCTTTAAGTAATGCGGAGAGTATGATGACATTTGATATTAGTAAAAGTTGTGATCAAAAAAACCAAAGTACAAGTGCAGTGAAAGCAAGTAATAATTATAGGGATATCGAGAAACAAGAGATTTTAGAGCCGATTAAGGAAGATCAATCGTCTAGCGTTATTCAAGATATTTCGAAAACTGAGGACAATATTAACACTTCCTACGccgaaaaatatgtaaaattggaGCAAAGTCAAAATCATGTGGAAGTTACTAGTAATAATTTACAGCAAAAATCCACGTTATCAAAAAACGTTGAAAGTGCTACAGAGAAGTGTAGTGACAGTGACGAAGAGGAAACACCGTTAATATGCAGAACCCGAAGACAAAAATGTCCTCAATGTATAAAAACTTTCCCAACAAACCTGGCATTAGAGAGGCACATGACCGTGCATAAACAAAAGACGAAAGTTCGCTATGTTTGTCATATGTGtgacaaacaattttcaaatatagagaAGCTTAAGATTCACTTACCAAATAGTCATCAAAAGGNNNNNNNNNNNNNNNNNNCAACTGAGGAGAACCAATCAAAAGGTACAGAAAATGATAAAAGAATCGACAGAGCTGACAAAGATTATAGTTTTGCAGAAAAGAGGCCGTTCAAATTTACTTGCAAAGTTTGTTCTAAACAATTCACTTACCAGAAATCTTTTATAACACACGCGAAAATTCACACTGAGTGCGATTTAGAAGATATAATTAGCGAGTACTTGCCACCTACAGCCTCAGAGAGCTCATCCAAAAGTAAAGAGACTGAATCAGAGGACGAAGAAATCCTTTCAGAAGGTTTACAGTGTACAAAGTGTGGTAAACTGTTTGCGACTAAGAGAAATCTCAAGCGGCATCTTGTAACTCACACTGGTTTGAAGTACAATTGTCCCATGTGTGGAAAAGAATTTTCGAGAATAGATAAGTTGAAAGAACATGAACAATCGAaacataaaatagaattatttggccAATTTTCCGATGATGATAATGACGAGGTTACGGATAATGAGAGTAAAATGACCGACTCTACTGAACGCCGAAAAAAgGTTAGGCGAAACACCTTGAGGGGCACGAGTCCTCGGGCGATAGCGCGAACTTTAGTCAGTCCTGACCTATCGGTATTAGGTGTTGGATCGCTCTCCTGTTCGCACTTTGGACTAACCGACCGAAGCACTCCCGGACGGAATTCCCGTTATGCTGCTCAACCAAAACTCGGAAGGAAGTCCGGCTACGCCGCCCAAACGCACCCGGAAAGAAGTCCGGCTAGGACGAATCTCATCGCCCCGCATAACACAACCTCGTGGAGGAATTCCAGTTAA
Protein Sequence: MQGERDRGQRGSHYHIYSPILREYREIRSVYGQRENSCPGSGCEDSCPVREVRTSSLKWNYLCRPRNSSWLLSSFPKPRENDPGSSLALEASLVSIQVPGLLETAYGKTGTRFKFESRFVILSMQEGDGLPTIICLNCRHLVDISFDFKCQVEQSDTKLRHALLSKETTLSLTHSINKVIAEAVSEEFPQQGIHCNVENNSEPLSDISSRNIDHFAVQTNEHLALASLSNAESMMTFDISKSCDQKNQSTSAVKASNNYRDIEKQEILEPIKEDQSSSVIQDISKTEDNINTSYAEKYVKLEQSQNHVEVTSNNLQQKSTLSKNVESATEKCSDSDEEETPLICRTRRQKCPQCIKTFPTNLALERHMTVHKQKTKVRYVCHMCDKQFSNIEKLKIHLPNSHQKXXXXXXXTEENQSKGTENDKRIDRADKDYSFAEKRPFKFTCKVCSKQFTYQKSFITHAKIHTECDLEDIISEYLPPTASESSSKSKETESEDEEILSEGLQCTKCGKLFATKRNLKRHLVTHTGLKYNCPMCGKEFSRIDKLKEHEQSKHKIELFGQFSDDDNDEVTDNESKMTDSTERRKKVRRNTLRGTSPRAIARTLVSPDLSVLGVGSLSCSHFGLTDRSTPGRNSRYAAQPKLGRKSGYAAQTHPERSPARTNLIAPHNTTSWRNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -