Basic Information

Insect: Acraspis erinacei
Gene Symbol: KRBA2
Assembly: GCA_035041075.1
Location: JAWWLR010000004.1:46160436-46165580[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 4.5e-06 0.0018 21.0 0.1 2 23 442 463 441 463 0.97

2 10 0.012 4.7 10.2 0.2 1 23 469 491 469 491 0.96

3 10 9.6e-05 0.038 16.8 1.8 1 23 498 520 498 520 0.98

4 10 5.6e-05 0.022 17.5 0.5 1 23 526 548 526 548 0.99

5 10 0.00076 0.3 14.0 0.7 1 23 554 576 554 576 0.98

6 10 0.00011 0.044 16.6 1.2 1 23 582 604 582 604 0.97

7 10 9.6e-05 0.038 16.8 2.8 1 23 610 632 610 632 0.97

8 10 9.5e-05 0.038 16.8 1.9 2 23 636 658 636 658 0.95

9 10 1.8 7.3e+02 3.4 0.1 1 21 664 684 664 686 0.69

10 10 5.5e-05 0.022 17.6 3.7 1 23 692 714 692 714 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	4.5e-06	0.0018	21.0	0.1	2	23	442	463	441	463	0.97
2	10	0.012	4.7	10.2	0.2	1	23	469	491	469	491	0.96
3	10	9.6e-05	0.038	16.8	1.8	1	23	498	520	498	520	0.98
4	10	5.6e-05	0.022	17.5	0.5	1	23	526	548	526	548	0.99
5	10	0.00076	0.3	14.0	0.7	1	23	554	576	554	576	0.98
6	10	0.00011	0.044	16.6	1.2	1	23	582	604	582	604	0.97
7	10	9.6e-05	0.038	16.8	2.8	1	23	610	632	610	632	0.97
8	10	9.5e-05	0.038	16.8	1.9	2	23	636	658	636	658	0.95
9	10	1.8	7.3e+02	3.4	0.1	1	21	664	684	664	686	0.69
10	10	5.5e-05	0.022	17.6	3.7	1	23	692	714	692	714	0.98

Sequence Information

Coding Sequence: ATGTCGACGGAAAGTATTGTTAACCGCAGTGAATTTGAAgagaaattgaatgaatttttggAAAGGAGGAAAGAGAGCAATAGGGCAAGGTGGACGAGGCAGAGGTTACAAAATGCAAAGGATGTTCTATTAAAAGGTGAAACTGCTAAGACCCTAGAAGATTATTATGAAAAACTGTTAGAAGCTCACCTTCAAACTAGCCATGGAGGTAGAGATAAGATCATGTATTACCTTAAAGACAAGTGTGAAGTTTTAAAAGAAGCGTGCGTACTGTTTGTTTCATGCTGTCAAATTTGCAACCGTAAAAGAGTTCCTCCTAAGCGTCTAGTCCCTTCTAAGCGTGCAGATAATTATAAGCCCACATGCGGATTTAATATCCAAGGTCAAGTTGACATAATCGATTTTCTATCCTCTCATGATGGAGAATATAAATGGCTGTTGAAGTATCAAGATCTCGGAACAAAATTTGTCCATTTGCGCCCACTTACGACGAATCAAGTCACCAACGTGGCAAAGGAGCTCTCGATCATTTTTTTTACCTGGGGTGCTCCAAGAATTCTTCAAAGTCAGAATGGTTCGAAATTCGTGGCGGCTGTTCTACAAGAACTAGTATCTCTTTGGCCCCAATTTGAAACAGTTCAAGGATGCCCAGAAGATGTACTTAAAGCCAGCTTGGAAAAGTCAAATGCAGATATTCAGAACATGTTGAACACATGGATGATTGATAATAATTCGACCAATTGGAGTCGTGGTTGCTACGAAGTTCAgTGGCAAAAAAATACTTCTAAGCACATAGTAACGGATAAAATTCCTTACGAAGCTGTATTCGGACCAGCAAAAAGTAGCTTTAAAAGTGCAACGtttcaagagcaaaatttaaacgGTATTGTTAAGCAAGAAGTCTTGGAGACAGCTCTTGATGAACAGCACGTTTGTTCAATTAATActgaaagTGATGTTGATTcgaacaaaaaaaagacgaaaaaatcgGATCGTCCGGATCCCATGGAATTCGtatcgcttgaaaattcaatatcgaATACGCAGGAACAAAATACGCAATCGGATGTGCAGCAAACTTCTGCATCATCAGATGAACAGCAGCAAAATACACAATTGGATGCGCAGAATGCACTTCGTCTGGATAGATGTGGGGTTCAAGATGACACGCAATCTTCTGAGTATCCATCAAAGGAGGAGGTAGTCCACTTGACTCACGTCATAATCAAGTGTGAACCTCCGGAATATGACACAGCTGATCAAATGGAACACTTTGTAGAAGAACAGAGCAGGGAACTGTTGATGAGAAAAAATTTGCCTGTCGAGTGTGAAACCTGTGGTGAAGTATTTAGCTCAGTATCTGGACTTAGTACTCATATGAGGTCTCACACGGGAACAAAACCTTTCGAGTGCgacatttgcaataaaaaattgacaaatgacCAAGCAGCGAAAACGCACATAAACGATCATATGGGAACGGATCAGCGTTTCAAGTGTCCCATGTGtccaagagattttaagagatataactTTTTAAGGAGTCATGTACAAAACCATCCAAAAAATGACCTTTATAGATGTAGAATTTGTAAGGAGAGTTTTGCAACAAAAGGTATTTTACAATCACACATGATCACCCACCaggagaagaaatttttttcttgtgataTTTGCAAGAGACCTTTTATGTTGCTGTGGCAACTAAATAAGCATAAAAAGATCCACTTGGCCGAAAAACCCTACGCTTGTGACACCTGTGGAAAACAGTTTTTGACGCCATATCATCTGAATATTCATGTAAGGTACCACACGGGAGAAAAGCCTTTCGAGTGTAATATTTGTAAGAAAAGGTTCACcattaaaagaactttaaaaaatcacaaaataagtCACGAGGAAAGACAATGTGATGTTTGCAAGAAAGTTTTTACATCGAAAAATGCTTTACGGTCGCATAATAATAAGTTTCACTCGGATAAGCGTACCTATCAGTGTGATACATGTGGAAACACATATCTCGGGAGAGCTGGTATTATAGGTCATTTACGCCTTCACACTGGAGAACATCCATTCGAGTGCGATATTTGTAAGCAAAAATTTAGATACAAATCGACTTTAAACTCCCATAAAAAGAATCATATTGAAAATGACAAGTGCCCAGCAGATGTAATGGATTGCGAGCAAGCGGCTTTTGAAACTGTCAATGTAAAGGTAGAAAACGACAATAATCATACTTCGGCAGATGGAGAAGATGGAATGGTCAGTATTCCGAAAACAATATTTAAGACTGAAGTGCCAGAGAAAGAAACGTGTGATCCGCTTAATTTGAATCAAGAAGCAGAAATTAAAGATATTAAGACAGAAATGGAAGAGGCGATAAATTAA
Protein Sequence: MSTESIVNRSEFEEKLNEFLERRKESNRARWTRQRLQNAKDVLLKGETAKTLEDYYEKLLEAHLQTSHGGRDKIMYYLKDKCEVLKEACVLFVSCCQICNRKRVPPKRLVPSKRADNYKPTCGFNIQGQVDIIDFLSSHDGEYKWLLKYQDLGTKFVHLRPLTTNQVTNVAKELSIIFFTWGAPRILQSQNGSKFVAAVLQELVSLWPQFETVQGCPEDVLKASLEKSNADIQNMLNTWMIDNNSTNWSRGCYEVQWQKNTSKHIVTDKIPYEAVFGPAKSSFKSATFQEQNLNGIVKQEVLETALDEQHVCSINTESDVDSNKKKTKKSDRPDPMEFVSLENSISNTQEQNTQSDVQQTSASSDEQQQNTQLDAQNALRLDRCGVQDDTQSSEYPSKEEVVHLTHVIIKCEPPEYDTADQMEHFVEEQSRELLMRKNLPVECETCGEVFSSVSGLSTHMRSHTGTKPFECDICNKKLTNDQAAKTHINDHMGTDQRFKCPMCPRDFKRYNFLRSHVQNHPKNDLYRCRICKESFATKGILQSHMITHQEKKFFSCDICKRPFMLLWQLNKHKKIHLAEKPYACDTCGKQFLTPYHLNIHVRYHTGEKPFECNICKKRFTIKRTLKNHKISHEERQCDVCKKVFTSKNALRSHNNKFHSDKRTYQCDTCGNTYLGRAGIIGHLRLHTGEHPFECDICKQKFRYKSTLNSHKKNHIENDKCPADVMDCEQAAFETVNVKVENDNNHTSADGEDGMVSIPKTIFKTEVPEKETCDPLNLNQEAEIKDIKTEMEEAIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00201035;
90% Identity: -
80% Identity: -