Basic Information

Insect: Acraspis erinacei
Gene Symbol: -
Assembly: GCA_035041075.1
Location: JAWWLR010000054.1:6334983-6351194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00041 0.16 14.8 0.1 1 23 90 112 90 112 0.95

2 12 3.8e-05 0.015 18.1 1.9 1 23 120 142 120 142 0.98

3 12 5.2e-06 0.0021 20.8 0.2 2 23 150 171 149 171 0.97

4 12 0.00048 0.19 14.6 0.8 5 23 180 198 177 198 0.96

5 12 0.00021 0.083 15.8 4.0 1 23 205 227 205 227 0.98

6 12 4.9e-06 0.002 20.9 0.1 1 23 233 255 233 255 0.96

7 12 8.3e-07 0.00033 23.3 0.2 1 23 261 283 261 283 0.99

8 12 8.8e-07 0.00035 23.2 3.1 1 23 289 312 289 312 0.96

9 12 2.4e-06 0.00094 21.9 0.5 1 23 318 341 318 341 0.96

10 12 3.6e-06 0.0014 21.3 2.8 1 23 347 369 347 369 0.99

11 12 7.3e-05 0.029 17.2 0.4 1 23 375 397 375 397 0.94

12 12 0.00017 0.068 16.0 0.2 1 23 403 427 403 427 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00041	0.16	14.8	0.1	1	23	90	112	90	112	0.95
2	12	3.8e-05	0.015	18.1	1.9	1	23	120	142	120	142	0.98
3	12	5.2e-06	0.0021	20.8	0.2	2	23	150	171	149	171	0.97
4	12	0.00048	0.19	14.6	0.8	5	23	180	198	177	198	0.96
5	12	0.00021	0.083	15.8	4.0	1	23	205	227	205	227	0.98
6	12	4.9e-06	0.002	20.9	0.1	1	23	233	255	233	255	0.96
7	12	8.3e-07	0.00033	23.3	0.2	1	23	261	283	261	283	0.99
8	12	8.8e-07	0.00035	23.2	3.1	1	23	289	312	289	312	0.96
9	12	2.4e-06	0.00094	21.9	0.5	1	23	318	341	318	341	0.96
10	12	3.6e-06	0.0014	21.3	2.8	1	23	347	369	347	369	0.99
11	12	7.3e-05	0.029	17.2	0.4	1	23	375	397	375	397	0.94
12	12	0.00017	0.068	16.0	0.2	1	23	403	427	403	427	0.94

Sequence Information

Coding Sequence: ATGCAGCACTACACCGATGGCGTGAGTGGAAACGTGGGGGAAGATTGGCGAATCAGCGTTAATGTTAGGTTGGATAAGGCAAGTTGCCTCTGTGCGTTCAGGCTGTTCGTTGAGCGGTGCGAGGAGGCTAGCAGATTCTTTGATAAATTATCGgtTGTATCTCGCGAAGGCTCGCTGTACACATGCTTGTTATGTTCCTCTGAATGTGAAAAAGGAGATGCAAAGTCCATTATATCACACTTAAGGACAGTGCACAATATTCGGTTGTATATATGTGATTTATGTGGGTTGGAGTTCAGAAAAAGAACTGATCTTTCAGTTCATCTTGATGACCACGTTGCAAAAGAGGAAGGAGACTTTCAGTGTGAGAACTGTAACAGAATATTTACTAATTTGCGACTTTTTAGAATTCATAAGCGCATTCATTATCCTCAAACTAAATCCTGGCCATGTGAAATATGTGGCAAGCGATACAGTTCTAGAAACTTGCTGGAGGAACATACTAATACCCATACTGGAAATCGGCCTTATATGTGTAAATGTGGAAAAGATTTTGCTTCAAAGTACACATACAAGGCGCACGTAAAAACACACGAATATCGACCACGACCTTTTGAATGTTCGCATTGTAGTAAAACTTTTTTGAGTCAGCAAAACCTTAGTCAGCATGAGAGAACTCATAATGGAGTTAAGGAATATGTGTGCGATCAGTGTGGTAAAGCTTTTGGATCACCACATAATCTGGAAGTTCATAGTATTGTGCATACGGGTCACAAACCGTATCGGTGCAGTGAATGTGGCAAAGCATTCGCCAGAAAAGCTGAGATTAGAGATCACGAAAGAACTCACACGGGTGAAAAACCGTACCAATGTGAACATTGTGGTTCTACTTTcagTCAAAGGTCGAATCTACAGTCTCACAAACGAGCAACTCATTACAATGATAAAAGATATAAATGCGATGATTGTGGAAAAGGATTTAAGCGACGTAGACTTCTAGATTATCATATAAAAGCGGCTCATACTGGTGAACGTCCATACAAATGCGAGACTTGTACAGCAACATTCGTTTATCCTGAACACTTCAAAAAGCACATGCGCATTCATACAGGAGAAAAACCATTCTTGTGCGAAGTATGCGGTAAAGCATTTAACAGCCGAGATAACAGAAATGCTCATCGCTTTATACACAGTGATAAGAAACCATATGAGTGTTTAGTTTGTGGCACGGGCTTCATGAGGAAACCTCTTTTATATACTCATATGCAAACGCAGgGCCACCTGAACGACACAATAGTAGTAAACCAACCAAGATTGACGACAGAAGAGGATCAAGTTATCACTGTCGCGGAAGGCAATGTGGAACTTTTGATGGAAAACGCTGAAGTTGCACAGACAAGGAAGGGTTTTCGTCCAACGCTGAGAAGGGTCAGGGAGACTGGACCCTCAGACTACGGTATTTCCATTCAATGTTGGTTTTCTCACATCTGGCAGGGCAAACCCAAGGCGCCCAGACAAGCCCAAGGCAAGGCCTCGCATTTCGAGCCCttggaattttcaaggaagacccAAGACGATCAATTCAAGGCAGCGCGTAAGGCTCGTCTTGTCTTTTCTTGA
Protein Sequence: MQHYTDGVSGNVGEDWRISVNVRLDKASCLCAFRLFVERCEEASRFFDKLSVVSREGSLYTCLLCSSECEKGDAKSIISHLRTVHNIRLYICDLCGLEFRKRTDLSVHLDDHVAKEEGDFQCENCNRIFTNLRLFRIHKRIHYPQTKSWPCEICGKRYSSRNLLEEHTNTHTGNRPYMCKCGKDFASKYTYKAHVKTHEYRPRPFECSHCSKTFLSQQNLSQHERTHNGVKEYVCDQCGKAFGSPHNLEVHSIVHTGHKPYRCSECGKAFARKAEIRDHERTHTGEKPYQCEHCGSTFSQRSNLQSHKRATHYNDKRYKCDDCGKGFKRRRLLDYHIKAAHTGERPYKCETCTATFVYPEHFKKHMRIHTGEKPFLCEVCGKAFNSRDNRNAHRFIHSDKKPYECLVCGTGFMRKPLLYTHMQTQGHLNDTIVVNQPRLTTEEDQVITVAEGNVELLMENAEVAQTRKGFRPTLRRVRETGPSDYGISIQCWFSHIWQGKPKAPRQAQGKASHFEPLEFSRKTQDDQFKAARKARLVFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -