Basic Information

Insect: Acraspis erinacei
Gene Symbol: -
Assembly: GCA_035041075.1
Location: JAWWLR010000004.1:18869767-18874488[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0024 0.95 12.4 0.6 1 23 168 191 168 191 0.90

2 14 1.7e-06 0.00067 22.3 0.4 1 23 197 220 197 220 0.97

3 14 0.00026 0.1 15.5 0.2 2 23 226 248 225 248 0.95

4 14 0.0022 0.88 12.5 1.2 1 23 253 276 253 276 0.96

5 14 1.6e-06 0.00065 22.4 0.4 2 23 283 305 282 305 0.94

6 14 3.3e-05 0.013 18.3 1.1 1 23 311 333 311 333 0.97

7 14 5.6e-05 0.022 17.5 0.1 3 23 341 361 339 361 0.98

8 14 0.0018 0.72 12.8 0.1 1 23 499 522 499 522 0.96

9 14 1.9e-07 7.5e-05 25.3 1.3 1 23 528 550 528 550 0.97

10 14 0.022 8.6 9.4 0.2 2 23 556 578 555 578 0.95

11 14 0.017 6.9 9.7 0.5 1 23 583 606 583 606 0.94

12 14 6.5e-06 0.0026 20.5 0.4 3 23 614 635 612 635 0.94

13 14 3e-06 0.0012 21.5 2.7 1 23 641 663 641 663 0.98

14 14 8.7e-06 0.0034 20.1 0.8 1 23 669 691 669 691 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0024	0.95	12.4	0.6	1	23	168	191	168	191	0.90
2	14	1.7e-06	0.00067	22.3	0.4	1	23	197	220	197	220	0.97
3	14	0.00026	0.1	15.5	0.2	2	23	226	248	225	248	0.95
4	14	0.0022	0.88	12.5	1.2	1	23	253	276	253	276	0.96
5	14	1.6e-06	0.00065	22.4	0.4	2	23	283	305	282	305	0.94
6	14	3.3e-05	0.013	18.3	1.1	1	23	311	333	311	333	0.97
7	14	5.6e-05	0.022	17.5	0.1	3	23	341	361	339	361	0.98
8	14	0.0018	0.72	12.8	0.1	1	23	499	522	499	522	0.96
9	14	1.9e-07	7.5e-05	25.3	1.3	1	23	528	550	528	550	0.97
10	14	0.022	8.6	9.4	0.2	2	23	556	578	555	578	0.95
11	14	0.017	6.9	9.7	0.5	1	23	583	606	583	606	0.94
12	14	6.5e-06	0.0026	20.5	0.4	3	23	614	635	612	635	0.94
13	14	3e-06	0.0012	21.5	2.7	1	23	641	663	641	663	0.98
14	14	8.7e-06	0.0034	20.1	0.8	1	23	669	691	669	691	0.95

Sequence Information

Coding Sequence: ATGTCTCCTACAAATAGAATATCTCGTGTGAAACTAAGACAGGACATATTcgattcaataaagaaaataaacttcttgGACGCTCTAAAGTTGGACATTCAAGCGGAAGCCAACTCCGTCAAAACAGTTTCATCACCAAAGGCTAAGTTTAAAGTAGTCAGAACCAAAAAAATCATAGTTTGTTCCCTATCGCCAAAACCCAAAGAAAAAGTCGGAACCAAAAAAACCACAATTTCCGTCTTATCGCCAGAAACTCTATCCACTGGAACTAAAGTCAACAAACCTGATCAAAAAGTTCCGCAACCAATAACAAGTATAAAAGCCTTGCCTAAAATTAAAATCCCCGTGCCAGATAAAGTTCTTAATgcgagaaaagaaaataattggacATCTGGATCAGAGAGTGTCCCTAAAGTTACTGATCCGCATAAATCTCCTGAACCAGGAAGAGAAACTAATGGGACATCTACATCAGAAAGTGCTTCTCGAGAAAACTATGAATACACTTGTAAAGTCTGCGGAACCTCATTCGCGAAAAGGGAGATTCTACGTGCGCACTTTGTTCGGAGACACACCGAGGTTTACAATTTCACTTGTGATGACTGTGGCAAACAGTTCAAACTCAAGGGCGACCTAGCAACGCACATCAGGCTCCAGCACATGGAGCCAGCTACGGTTTGCGAAGTTTGCGGCAGAACCTACAAAAACCGTCTTGCCCTCTACGTTCATCAGAAATACGCGCACTACAAAGCCAGATTTGAGTGTCAATACTGCAAGCGATGTATGGTCAGTCAGGAAAACCTTGATCAGCACATTGCAATGATGCATCTGGAGCTGAGCAATTTGAAGTGCGCCGAGTGCGGCAAAGTTTTTTCGAAGAAAGTCAGTCTCAAGAGACATGTGATGAATGTGCATGATAATATTAAGTCGTATATTTGCCCGGTGTGTAAAAAGGCGTTTGCCCAAACCTATCATATGAGACAGCATCTGCTTCTTCACACGGGCAAGCGGCTCTTTGGTTGCGACATTTGTGGGAAGGAGTTTGCACAGAAACCGGGACTTTTGAGCCACAGGAAGGTGCATCCTGGGGTACTTCCTCCGCTACCTGTTGTTCGATTAGATCATAAGCGACTTCATCCCCTCCACTTGCGAAAGGCTCTTCTCGCTCCGCGTTCAGCGAATCCGACGAGCGCTAGAGTCTCACAACGTAAAAAGAAATCTCGTAAAGGAAAACAAGGGAAGCTTCCCAAAGTTTCCAAGTCAAGATCTCGACTAAAGTTGAAGAAGATCATCTTCAAATCGATTGGAAGTCTCAATGTAGAGCCGAGCataatcaaagaaataaacttcGTGCCGGCTTCAGAGAAACGGAAAGATAAGTCAAGAAAAGgcaacaattttaaagtttactcCCTCAATAATCCGTCATCAGCTTCTCCACCTAGAACTGAAAATAATCTAAAGCCAGAACCTGTTCAGCGACCACGAACTGAATTCGTTTGTTCAGTCTGTGGTACAATATTCTTCCGCAAAGTAATTCTACAGGCTCATATTGCTCGAAAACActctgaaaattacaattttccttGTAAAGAGTGCGGTAAAAAGTTCAAGGTCAAGGGCGATCTCACAACTCACATGAGGTTTCATCAAGAACCGCCGGTAGTTTGTGATGCGTGTGGAAAGACTTACTTGAACAGTCGCTATCTTTACTTACATCAGAGATACGCCCATTACAAAACTGCATTTCCCTGCCCTTTTTGCAAAAGATTTATGGCTACTCAGGAGAATCTTGATCAACATATTACCCAGCAGCACGGTCAGAAGGATAGAGTGATTTGTGATTCGTGTGGTAAAAGTTTCTCGACGACTGATACTCTCCGCCGTCACGTTAAATATGTACACTGTAAGATTAGATCATACTCGTGTGAGATTTGTAGTAAATCGTTTTCTCGAAGGTGTGAATTAAGGCAGCATTTACTTATTCACACTGGAAAACGTCTCTTCCTTTGTGACATTTGTGGTCAACAATTTACTCAAAAATCTGGACTAGTCAGTCACAGGAAACGCCATCCGGGTGAACATCCTCCCTTACCAATGGTTCGATTGGATAATGCCCTTAGTGAATTTACGCGAAAGTAA
Protein Sequence: MSPTNRISRVKLRQDIFDSIKKINFLDALKLDIQAEANSVKTVSSPKAKFKVVRTKKIIVCSLSPKPKEKVGTKKTTISVLSPETLSTGTKVNKPDQKVPQPITSIKALPKIKIPVPDKVLNARKENNWTSGSESVPKVTDPHKSPEPGRETNGTSTSESASRENYEYTCKVCGTSFAKREILRAHFVRRHTEVYNFTCDDCGKQFKLKGDLATHIRLQHMEPATVCEVCGRTYKNRLALYVHQKYAHYKARFECQYCKRCMVSQENLDQHIAMMHLELSNLKCAECGKVFSKKVSLKRHVMNVHDNIKSYICPVCKKAFAQTYHMRQHLLLHTGKRLFGCDICGKEFAQKPGLLSHRKVHPGVLPPLPVVRLDHKRLHPLHLRKALLAPRSANPTSARVSQRKKKSRKGKQGKLPKVSKSRSRLKLKKIIFKSIGSLNVEPSIIKEINFVPASEKRKDKSRKGNNFKVYSLNNPSSASPPRTENNLKPEPVQRPRTEFVCSVCGTIFFRKVILQAHIARKHSENYNFPCKECGKKFKVKGDLTTHMRFHQEPPVVCDACGKTYLNSRYLYLHQRYAHYKTAFPCPFCKRFMATQENLDQHITQQHGQKDRVICDSCGKSFSTTDTLRRHVKYVHCKIRSYSCEICSKSFSRRCELRQHLLIHTGKRLFLCDICGQQFTQKSGLVSHRKRHPGEHPPLPMVRLDNALSEFTRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -