Basic Information

Insect: Acraspis erinacei
Gene Symbol: -
Assembly: GCA_035041075.1
Location: JAWWLR010000004.1:46110432-46129336[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.064 25 7.9 1.1 3 23 75 95 75 95 0.99

2 24 0.00013 0.051 16.4 0.2 3 22 107 126 105 126 0.95

3 24 0.0012 0.49 13.3 0.6 2 23 134 155 133 155 0.97

4 24 9.7e-06 0.0039 19.9 2.6 1 23 189 211 189 211 0.98

5 24 2.6e-06 0.001 21.7 0.2 2 23 218 239 217 239 0.97

6 24 0.00023 0.091 15.6 0.2 1 23 245 267 245 267 0.96

7 24 0.00011 0.045 16.6 0.1 1 23 274 296 274 296 0.93

8 24 0.00012 0.048 16.5 0.1 2 23 303 324 302 324 0.96

9 24 0.00055 0.22 14.4 1.1 1 23 330 352 330 352 0.98

10 24 0.00089 0.35 13.8 1.8 1 23 358 380 358 380 0.98

11 24 0.011 4.5 10.3 4.3 1 23 386 408 386 408 0.97

12 24 0.00034 0.13 15.1 0.3 1 23 415 437 415 437 0.98

13 24 3.2e-05 0.013 18.3 0.4 1 23 443 465 443 465 0.97

14 24 1.7e-06 0.00067 22.3 2.0 1 23 471 493 471 493 0.98

15 24 0.00043 0.17 14.8 0.2 3 23 544 564 542 564 0.95

16 24 4.7 1.9e+03 2.0 1.0 1 8 571 578 571 579 0.91

17 24 1.5e-05 0.006 19.4 0.2 1 23 582 604 582 604 0.98

18 24 0.0042 1.7 11.6 0.7 1 23 610 632 610 632 0.97

19 24 0.00024 0.094 15.6 0.6 1 23 638 660 638 660 0.98

20 24 5.9e-05 0.023 17.5 5.9 1 23 666 688 666 688 0.98

21 24 8.6e-05 0.034 17.0 0.8 1 23 694 716 694 716 0.96

22 24 5.2e-06 0.0021 20.8 0.1 1 23 723 745 723 745 0.99

23 24 1.5e-05 0.0058 19.4 2.5 2 23 756 777 755 777 0.98

24 24 0.00056 0.22 14.4 0.9 1 23 782 804 782 804 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.064	25	7.9	1.1	3	23	75	95	75	95	0.99
2	24	0.00013	0.051	16.4	0.2	3	22	107	126	105	126	0.95
3	24	0.0012	0.49	13.3	0.6	2	23	134	155	133	155	0.97
4	24	9.7e-06	0.0039	19.9	2.6	1	23	189	211	189	211	0.98
5	24	2.6e-06	0.001	21.7	0.2	2	23	218	239	217	239	0.97
6	24	0.00023	0.091	15.6	0.2	1	23	245	267	245	267	0.96
7	24	0.00011	0.045	16.6	0.1	1	23	274	296	274	296	0.93
8	24	0.00012	0.048	16.5	0.1	2	23	303	324	302	324	0.96
9	24	0.00055	0.22	14.4	1.1	1	23	330	352	330	352	0.98
10	24	0.00089	0.35	13.8	1.8	1	23	358	380	358	380	0.98
11	24	0.011	4.5	10.3	4.3	1	23	386	408	386	408	0.97
12	24	0.00034	0.13	15.1	0.3	1	23	415	437	415	437	0.98
13	24	3.2e-05	0.013	18.3	0.4	1	23	443	465	443	465	0.97
14	24	1.7e-06	0.00067	22.3	2.0	1	23	471	493	471	493	0.98
15	24	0.00043	0.17	14.8	0.2	3	23	544	564	542	564	0.95
16	24	4.7	1.9e+03	2.0	1.0	1	8	571	578	571	579	0.91
17	24	1.5e-05	0.006	19.4	0.2	1	23	582	604	582	604	0.98
18	24	0.0042	1.7	11.6	0.7	1	23	610	632	610	632	0.97
19	24	0.00024	0.094	15.6	0.6	1	23	638	660	638	660	0.98
20	24	5.9e-05	0.023	17.5	5.9	1	23	666	688	666	688	0.98
21	24	8.6e-05	0.034	17.0	0.8	1	23	694	716	694	716	0.96
22	24	5.2e-06	0.0021	20.8	0.1	1	23	723	745	723	745	0.99
23	24	1.5e-05	0.0058	19.4	2.5	2	23	756	777	755	777	0.98
24	24	0.00056	0.22	14.4	0.9	1	23	782	804	782	804	0.98

Sequence Information

Coding Sequence: ATGTACTACACGTTCTTCAGGTTAACTTCAAGAGATGAAGTTCCATGGAACAGTGTCTTTATTAAATCTGAGCCTGCCGAGTATGATTTGGATGGCGAAGATAATTCCATAGAAGCAGAGAACAATCTGAACAATCTTTCTAATAACATCAAAAAAGAGCTTTCATTAAATGAGGACCACACTTCGAAATTACCTATAATCAAACTGGAAAAACTGAACTGGTGTAAGCTATGTCGAAATGAATTCGAGACCCCTGAGAGTTTAAAATTCCATATGCAAACCCACAGAAAAGTTAAATCCAGGGCTAAACCCCTCGCTTGTGACGTTTGTTCCAAAGGTTATTCGAGGAAGCGTTACCTAATTAATCATATGAAGACATGCGAAGGATCAGCGATCCTCAAATGTGATCTTTGTGATCAAACGTTTCTTAGGTTATCTGCTCTTGTAAATCATAAGCGTAGTCATATCGGACAACCCTTGGATATTAAGGAAAAATACGCTACATATAATGCAATGAAATTGAATTTACTCGGTAAAGAGTCCGACAACAACGAGAGTAAGCCTTTTTCTTGTGACATTTGCTCGAAAAGCTTTGTGAAAAGGTCTTATCTGAACTTACACAGAAAGAGGCATTGGTTTGCAAGGCCAATTCCATGTGACATTTGTGCAAAAAGATTTATCACGAAGTTTGAGCTTATTAATCACATGAGAACTCACACGGGAGAAAGGCCTTTCAAGTGTGACGTTTGTAAGGCAAAATTTGCCATCAAAGAAAACTTGAGACGGCACGTAATTGCTCATATGAAAAATAACGGACCTTATGTGTGTTCAGTATGTGCAAAAGGTTTTTCGACAGCCTACCTTTTGAAGAACCATATACCAACCCACTCAGAGCGTAAGCCTTTACAGTGTCCTGTTTGCGAATACGGATTCATAAGACGAACCGAATTGGCGTCGCACATGCTCTTCCACGAAAACGAAAAATCATTCGAGTGTGAGGTTTGCTTGAAAACTTTTATAACGATTACCTTTCTGAAGCAgcatagaaaaattcatttagagAGAATGCCCTACACGTGTGGAATTTGTGAGAGAAGATTTATCAAGAAACAGGTCTTCAATATGCATATGCGTTTTCATGATGGAAAAATGCCTTTCGAGTGTGACTATTGTAAGCGAAAATTCGCTCACCGTCACAGGATGGAAGATCACGTAATTTCGCACTGTGGTGATGATGGAGTGTTCAAGTGTGAAATTTGTGGAGCAGGCTTTTCGATGCCCAAGATTTTAAAGCGACACCTCCGattccatttaaattttaagccctTCGAATGTCAGCAATGcgataaaaacttttcaaaaaaggcTGATTTAGCGGAACACGTACTCCAGCACGAAAACAGCAGGCCTTTTGTTTGTGAAGTTTGCGGCAAAGCTTTTACGAGAAAGTTTTATCTACGCTTACACAAGAAAAGACATTTGCAAGATTCCTTTAAGCCCAGAGGTCCCTTTTTACCTAAAGGGCCCTTTCTGCCTAAACAGCCCCTTCAGCTGATTCATGAAAAAAAATCGCCTACGCAACAGGTGGATACTTCTGTGCTTAGTCAAACTGAAAAGAAACCTTTGGCGTGtgaaatctgcaataaaaaatttccagataGTTACAGGATGAAATTGCACATGATTGCTCATACGGGAGATGGCGGACCGCACAAGTGCTCAGTTTGTGGAAAAGGTCCACGTCACAAATGTCCGGTTTGTGCTCAAGGTTTTGTGAGATCCGACGGTTTAGTTGTACATATGCGAAAACACACCAAAAGTAAACCCTTTGAATGTGAATTTTGCAAGAAAGGTTTTTTAAGAAATACAGATTTAATTGCACATCGGTTCATCCATACGAACACAAAACCTTTTGTTTGTGACGTTTGTTCGAAAGGTTATCTACGGCTGTCGAATCTGACTGTTCACAAAAGGACACACTTGGATGAAATGCCTCACAAATGTAAAACATGTAAAAAAAGGTTTATCAGAATACATGATCTTAATCTTCACATGCGCGTCCACACCGGAGAAAAGCCTTTCAAGTGTgacatttgtaagaaaaaatttgcaaatcgTCGTCTTATGAAAGTGCACGTACTTGCTCACATGGAAGATGACGAGCCGTACAAGTGTGGAGTTTGTGAGGAGGGTTTTGTAACGTCGGACACTTTGGAGCTCCACATGCAAACCCATCGAGGACGCAAATCCTTTGAATTGCCCAACAAGTGTGAAACATGTGGAGAAAGATTTAGAACAATAAATCAACTTCATATTCATATGCGCACTCACATTAGAGGAAATTTTGAGTGCGATATTTgtaaaaagaatctaaaatatgCCGAATCTTTGAAATTGCACAAAATGTCGCATGTTAAACCTAATAAGCGTGCAAATAGCAAAATAAGTCATCAGAAAATAGATTTCGAAGCGGTCTTCTTGCATGCTCATGAGGAGAATAGGAACTCGAAGTGTCATAAGACAAATCTGAATAGAATGAAGGATAGTGAAAATCCTACTTTATTGcctgtaaaaatggaatttggcGAAGCAGTAAATTTAAGCTGCGACATAGAATTTGAAGATGTAAAAATAGAAGTGGAGGAatga
Protein Sequence: MYYTFFRLTSRDEVPWNSVFIKSEPAEYDLDGEDNSIEAENNLNNLSNNIKKELSLNEDHTSKLPIIKLEKLNWCKLCRNEFETPESLKFHMQTHRKVKSRAKPLACDVCSKGYSRKRYLINHMKTCEGSAILKCDLCDQTFLRLSALVNHKRSHIGQPLDIKEKYATYNAMKLNLLGKESDNNESKPFSCDICSKSFVKRSYLNLHRKRHWFARPIPCDICAKRFITKFELINHMRTHTGERPFKCDVCKAKFAIKENLRRHVIAHMKNNGPYVCSVCAKGFSTAYLLKNHIPTHSERKPLQCPVCEYGFIRRTELASHMLFHENEKSFECEVCLKTFITITFLKQHRKIHLERMPYTCGICERRFIKKQVFNMHMRFHDGKMPFECDYCKRKFAHRHRMEDHVISHCGDDGVFKCEICGAGFSMPKILKRHLRFHLNFKPFECQQCDKNFSKKADLAEHVLQHENSRPFVCEVCGKAFTRKFYLRLHKKRHLQDSFKPRGPFLPKGPFLPKQPLQLIHEKKSPTQQVDTSVLSQTEKKPLACEICNKKFPDSYRMKLHMIAHTGDGGPHKCSVCGKGPRHKCPVCAQGFVRSDGLVVHMRKHTKSKPFECEFCKKGFLRNTDLIAHRFIHTNTKPFVCDVCSKGYLRLSNLTVHKRTHLDEMPHKCKTCKKRFIRIHDLNLHMRVHTGEKPFKCDICKKKFANRRLMKVHVLAHMEDDEPYKCGVCEEGFVTSDTLELHMQTHRGRKSFELPNKCETCGERFRTINQLHIHMRTHIRGNFECDICKKNLKYAESLKLHKMSHVKPNKRANSKISHQKIDFEAVFLHAHEENRNSKCHKTNLNRMKDSENPTLLPVKMEFGEAVNLSCDIEFEDVKIEVEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -