Aeri027739.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- -
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000127.1:20558512-20559221[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-08 0.00023 23.2 0.0 2 38 14 50 13 55 0.87 2 2 0.16 4.6e+02 3.0 0.0 4 13 97 106 96 111 0.88
Sequence Information
- Coding Sequence
- ATGGTGCGaaatcgaaaaagacaaattgaaaaaccaaatgaagaaaatattcagAGTGCAATTGATGCTATCCACGCTGGTAGTAGTGTTCATGGCGCAGCGAAAAAATTTGGGATTGCACCGGAAACATTGCGCCAACGATTTATAGGACGAAAATCGAAATCAGCAGCGCATGTTGGCCAACAAGTATTTGATGACGAACAGGAGCAGGAGCTCCGAGATTATTTGTTGAAGGCGGCAAAAATGTTTTATGGTCTCGGGTTGACGGAACTTCGAACGCTTGCATCTGAATTCGCAAAAGCATTGAATGCAGTCCGACGCATAAAGAAAATTCCAGAATCCTGGATTCCTAAGGAGAAAACTGGGCAACCAATTGCAACCAGAGACTGGGCCAAAGGATTTATTATACGTCATCCTGAGTTGAGTTTGCGTCGACCAGTATCGACATAA
- Protein Sequence
- MVRNRKRQIEKPNEENIQSAIDAIHAGSSVHGAAKKFGIAPETLRQRFIGRKSKSAAHVGQQVFDDEQEQELRDYLLKAAKMFYGLGLTELRTLASEFAKALNAVRRIKKIPESWIPKEKTGQPIATRDWAKGFIIRHPELSLRRPVST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -