Aeri030110.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- ttk
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000128.1:18430152-18436132[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-12 3e-08 35.7 0.0 1 45 326 371 326 371 0.96
Sequence Information
- Coding Sequence
- ATGGAGACCGACTCGCAGAAGTTCTGTTTGAGGTGGAATAACCATCAAACGAATATGATCCAATTCTTTGATGAGTTACGTAAAAATAAAGACTTTACTGACGTGACTTTAATGTCAGATACTCAGGAAGTAATAAGATGTCATAAAATAGTGCTGGCTGCAggctctttttattttgaaagagttTTTCACCACGTAGAGCCAGATCAATCGACTCTCGTTTTGACGAACACAGATTTTGCACTATTGGAGTCCTTAATAATGTTCATGTACCGTGGAGAAATACATGTGCATCAGGATGATCTAAAAGCTCTGTTAAAAGCCGCTGAGAGACTTGagATTAAAGGTCTTAACAATTTTAAGGACAAAAATCAACTTGAAAATGGGAGGCTAGATGAGATCCCATCACCCTTTCTGgaaCGTTCTCCACCACCATCGACAACGCCACGACAGAAAATGGAAAAACATCCGCAACTTCCGACTCCTTTATCACATGCAGATTTGTACAATTTGCATGTGTACAATCAAGCTGTAAATACAATTTCATCTCAAGGAATTTGGCCGATTCCTGCTTTTCCGTTTTCACAACATCCGTACCATTCACACTATTCTGCATTGAGCAGATCTTATATTCATAATTCCGACACTTCGCCCCTGACGAAAAAAAAGATGATATCCTCGGCATCAATGGCTAGCACTCCAATTTTGAGGACAGCACTTGTTGGTCAGGGTGTTGTTGGAAATGCACACTCAACATCTGGATCTAATTTAGATAATGTTGACAATGGATCTGGTAGCAATGGTTCTGCTAATGAGAACGACCGACGATACAGCACAGACTTCTCAGCAAATGAAGACCCCTCGAGTCCTCATACTGATATGGAGGATGATGAGAGGAAACATTCTCCGAGATCAAgacGTGACAGTTTCAACTCCAGCACAGCACCGAAAGAGTGGAAGCGATATAAGCAGTACACTCGGGAGGACATCAATGCTGCCATAGATGTTGTAAAAGCAGGAGAAATGAGCGCTTTGCGAGCATCCCGAAGATTCAATGTCCCTTCTCGCACATTGTACGATAAGGTAAAGAAATTGGGAATTAAAACTCAGCGACACTCCGGACGCCATTCAAGCAGAAGCGGAAACGGTATCGGTCACAGAATTGAAAACGACAGTGCTCGATTTCCATACGGAGTTGGAGGCAATTCTGATGGTAGCATTTACCGGAATTCCTATGGAATGGTAGATCCAGCAGAGCTGATAATGAGCATGAAACACAACAGTCCGAGTCCTAAAGCTCAACCTCTTTCAGAGGATGGTAACTTGGAGAACATGGTGGAAGATCTGTCGATAAAAAACCGTGGCATCATTCATCCTTTAATTCCCAAAGAGGAATTTAAAGCCGAAACTCCTCCGCCACATGAAAGCTATACCTCATGA
- Protein Sequence
- METDSQKFCLRWNNHQTNMIQFFDELRKNKDFTDVTLMSDTQEVIRCHKIVLAAGSFYFERVFHHVEPDQSTLVLTNTDFALLESLIMFMYRGEIHVHQDDLKALLKAAERLEIKGLNNFKDKNQLENGRLDEIPSPFLERSPPPSTTPRQKMEKHPQLPTPLSHADLYNLHVYNQAVNTISSQGIWPIPAFPFSQHPYHSHYSALSRSYIHNSDTSPLTKKKMISSASMASTPILRTALVGQGVVGNAHSTSGSNLDNVDNGSGSNGSANENDRRYSTDFSANEDPSSPHTDMEDDERKHSPRSRRDSFNSSTAPKEWKRYKQYTREDINAAIDVVKAGEMSALRASRRFNVPSRTLYDKVKKLGIKTQRHSGRHSSRSGNGIGHRIENDSARFPYGVGGNSDGSIYRNSYGMVDPAELIMSMKHNSPSPKAQPLSEDGNLENMVEDLSIKNRGIIHPLIPKEEFKAETPPPHESYTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00064355;
- 90% Identity
- iTF_00064355;
- 80% Identity
- iTF_00011314;