Aeri038925.1
Basic Information
- Insect
- Acraspis erinacei
- Gene Symbol
- retn
- Assembly
- GCA_035041075.1
- Location
- JAWWLR010000155.1:66121758-66124321[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-21 9.5e-17 63.6 0.0 15 89 6 78 2 78 0.94
Sequence Information
- Coding Sequence
- ATGGTAATTATGTATGTTTCAGGAACGCCGATCAATAGATTACCCATCATGGCAAAGTCAGTTCTAGACCTTTATGAACTCTACAATTTGGTTATTGCCCGAGGTGGTTTGGTAGACGTAATTAACAAGAAACTCTGGCAGGAAATTATCAAAGGTCTTCATTTGCCGTCAAGCATTACTTCTGCCGCCTTCACACTCCGCACCCAATACATGAAGTACCTCTATCCATATGAGTGTGACAGAAGGCATTTGTCAACCCCAGCGGAACTGCAAGCGGCTATCGATGGTAACCGGAGGGAAGGACGAAGGAGCAGCTATGGAGCATACGGTGGTGCAGGTGAGACCCTCGTCCAGAGGAATCCTCACACACCAAGTTCATTGGCCCTCCATCCTCAAATGTCACCGTTGTCACTTGTCACCGCGGTGGCAGGTGGTCAACATCACGGGCCACAGTCTTTGGTTAACGGAAGCGCTGCACACACACCCCTATCACATCATCCTCATCATCCTCAGCATCCACAGGGAGCCATGGGACAACCTGCCGGTgagccaatatttttttaa
- Protein Sequence
- MVIMYVSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDRRHLSTPAELQAAIDGNRREGRRSSYGAYGGAGETLVQRNPHTPSSLALHPQMSPLSLVTAVAGGQHHGPQSLVNGSAAHTPLSHHPHHPQHPQGAMGQPAGEPIFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -