Alat029116.1
Basic Information
- Insect
- Acleris laterana
- Gene Symbol
- nfxl1
- Assembly
- GCA_963966035.1
- Location
- OZ014458.1:913399-915876[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.014 2.9e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 19 3.1e-07 0.0063 17.6 15.5 3 19 186 202 185 202 0.95 4 19 6.7e-06 0.13 13.4 12.2 1 19 237 255 237 255 0.93 5 19 0.87 1.7e+04 -3.0 1.9 6 10 280 284 279 284 0.87 6 19 7.1e-09 0.00014 22.9 11.9 1 19 290 308 290 308 0.99 7 19 5.7e-08 0.0011 20.0 16.6 3 19 345 361 337 361 0.86 8 19 2 4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 19 6e-06 0.12 13.5 18.3 1 18 395 412 395 413 0.97 10 19 1.4e-08 0.00029 21.9 17.3 1 19 422 440 422 440 0.99 11 19 8.2e-05 1.6 9.9 5.2 9 19 488 498 486 498 0.89 12 19 0.01 2.1e+02 3.2 4.6 4 11 510 517 508 518 0.88 13 19 0.31 6.2e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 19 0.16 3.1e+03 -0.6 0.1 7 11 567 571 566 573 0.86 15 19 0.0048 96 4.3 6.2 1 11 588 598 582 599 0.91 16 19 0.84 1.7e+04 -2.9 1.5 15 18 613 616 612 617 0.82 17 19 0.00043 8.5 7.6 12.7 1 18 628 645 628 646 0.90 18 19 2 4e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 6.3e-05 1.3 10.3 13.0 1 16 687 701 687 707 0.86
Sequence Information
- Coding Sequence
- ATGGCTCGGAGATATCGCGATGCAGCCGCAAAAATGCAGCAAAATGTGCAGAAACATTTGAAAGGGATGAAGGAGCTTTCTTCTTCGGAAGATGAGGAGCCATACGAGTCGAGCGTCTTGGAAGGGGTGCTGCAGAGCTATCGGAGTGGCGGAGGCGACGCGCATATGCTCAATCGTACAAAGAATATGCTAGAAGAAGCCATTAGCGGCCGCTCGGTGACCTGCCTGATTTGCATCGCTTCCATCAAGCGCGCACAAGCCATCTGGACCTGCGACCATTGCAACTCGTATTTCCACCTCCCTTGCATCCAGAAGTGGTCCAACGACAGCATCAGCCTTCGGAGCGAGGAAAACCACGGGCCTATCGCAGTGTTTGTGCCTAAAAAAATAGAATGGTGCTGTCCAAAATGCCGGCATTCGTACAGTAAAGAAGAGATACCGCGAAAATATCGCTGCTTCTGCGGTAAAACTGATGACCCTAGTTTCCATCCTTGGCTTATACCTCACACTTGTGGGGAAGTATGTGAAAAACGCTTGTCAACTGGAGACAATTGCAAACACAGATGCTTGCTGCTATGCCACCCTGGCCCTTGCCCACCATGCCCTCAAACTGTGAATGGGGTGTGTTTCTGTGGAAAGGAACAGAAGAGAGTTCGCTGTAGTGCTGCAAAATGGTCTTGTGCTAAACAATGTAAGAAAAACCTTTCATGCAACTCTCACAAATGTGAAAATATTTGTCATCAGGATTCCTGTCCTCCCTGCAGCTACACTAGTCTGCAGCCCTGCTTGTGTGGGGCTGAGAAACTCAAGCGACCCTGCAATGACCCTGTATGGCAGTGTGAAAAGCCTTGTAACAAGCCTTTCTCCTGTGGCTATCACAAATGTGAAATAATATGTCATTCTGGTGATTGTGGGCAATGTCCTAACTCTGGCCTGCGGTCTTGTCCGTGCGGAGCCAATCAACGCTTTGTGCAGTGCCCTGATGCCATGGAGACTTGTGTTAGCACTTGTGGTAAGATCCAGGATTACTGTGAACACACTTGTCCTGAAAAATGTCATAAAGGCCCCTGCCCTCCTTGCCAGGTGTTGATAGAGAAGCAGTGCCAGTGCCGCGCACATACAAGATCCTTACCGTGCAGTAAAGAATATAAATGTGAGACAAAATGCAGAGGAACGAGATTGTGTGGCAAACATGGATGTGCCCGTAAATGCTGCAATGGTAACTGCCCCCCATGCGAAAAAATCTGTGATAAGCCACTTCAATGTGGCAGACACAAATGTACCACGGTCTGTCACCATGGTCCTTGCTACCCATGTCCCAGGGAATCCAAAGTAACTTGCCGCTGTAAGGAAACTTACATCACTGTTCCCTGTGGCAGAGAGAGGTACACAAAACCACCAAAATGCAGTCTTCTCTGCAAAATCAAATACAAATGTGGTCATGTTGAAGAAAATAAACATTCTTGCCATTTTGGTGACTGCCCCCCTTGCAAGGCTATATGCCATAAACTTTATGAAAAATGTGACCATGATTGCAAAGCTGTGTGCCATGCTTATGTATCGGTAGTTTTTAAACAGGTTGAAAAACCTGCTACACCATGGGAAGTTCAACCACCAAAGACCAAAGTGATGACACTGGACTGTCCACCATGTGAAATACCCGTGCCTATTGTTTGCTATGGAGAACATGAGACAGGAGAGCAGCCATGCCACGCAGCGACACGTCGGCCCTGCGGCCGCGAGTGTGGCCGGCAGCTACCCTGCACTAGACACAACTGCAAACTCCTCTGCCACTTATACGCTCCAGATCCAAACTACCCTGCTGTTCCTTCGTCATGTGAACCTTGTAACAGAGAGTGCCTGGTGCCAAGACCAAATAAATGCAGCCATAAATGTGCTAGGGGTGCCTGCCATGCAGGGCAGTGCCCCTCCTGTGAGGTTACAGAGAGAATCCCATGTCACTGCGGTGTAACAGAATTATATTTGCACTGTCGTGTACTGTCTAATGCAACTGAGGAAATGCTCTCATGTAAGCAGCAATGTCCTAAGAATATAGAGTGTGGCCACCGCTGCAGGAACCAATGCCATCCTGGTGCTTGTGGACAGGATCAGGTGTGCACCAAGAAAACTAAAGTTCACTGTAAGTGCGGCAATCTGAGAAAGGAAGCTGCTTGTAATTTAGTTAGGAAGGGAGAAGGAGTACCAGAATGCGATACTACTTGTGAAGCAAAAAGAATTGCAGTGGTTTTGGAAAAGGAGAAAGAAGACCAGCGAAGAAAGGAGATTGAAGAAGAAAAGAACAAAAAAGAGTTGGCTGAGTATGAATGGAAGTTGAGtggaaagaaaaagaaatacaaGGAAAAAAGGGTTGTGGTTAACCTGGATGAAAGGAATTTCCTGCAGAAGTATTGGATTCCTATGTTTtctattatagttttttttctggcctctatttattttatattttatgtccAGTGa
- Protein Sequence
- MARRYRDAAAKMQQNVQKHLKGMKELSSSEDEEPYESSVLEGVLQSYRSGGGDAHMLNRTKNMLEEAISGRSVTCLICIASIKRAQAIWTCDHCNSYFHLPCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDDPSFHPWLIPHTCGEVCEKRLSTGDNCKHRCLLLCHPGPCPPCPQTVNGVCFCGKEQKRVRCSAAKWSCAKQCKKNLSCNSHKCENICHQDSCPPCSYTSLQPCLCGAEKLKRPCNDPVWQCEKPCNKPFSCGYHKCEIICHSGDCGQCPNSGLRSCPCGANQRFVQCPDAMETCVSTCGKIQDYCEHTCPEKCHKGPCPPCQVLIEKQCQCRAHTRSLPCSKEYKCETKCRGTRLCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETYITVPCGRERYTKPPKCSLLCKIKYKCGHVEENKHSCHFGDCPPCKAICHKLYEKCDHDCKAVCHAYVSVVFKQVEKPATPWEVQPPKTKVMTLDCPPCEIPVPIVCYGEHETGEQPCHAATRRPCGRECGRQLPCTRHNCKLLCHLYAPDPNYPAVPSSCEPCNRECLVPRPNKCSHKCARGACHAGQCPSCEVTERIPCHCGVTELYLHCRVLSNATEEMLSCKQQCPKNIECGHRCRNQCHPGACGQDQVCTKKTKVHCKCGNLRKEAACNLVRKGEGVPECDTTCEAKRIAVVLEKEKEDQRRKEIEEEKNKKELAEYEWKLSGKKKKYKEKRVVVNLDERNFLQKYWIPMFSIIVFFLASIYFIFYVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023391;
- 90% Identity
- iTF_01464721; iTF_00009687;
- 80% Identity
- -