Alat033669.1
Basic Information
- Insect
- Acleris laterana
- Gene Symbol
- -
- Assembly
- GCA_963966035.1
- Location
- OZ014463.1:10167893-10201454[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 4.3 4.3e+02 2.8 0.1 1 19 399 417 399 419 0.94 2 24 4.3 4.3e+02 2.8 0.1 1 19 481 499 481 501 0.94 3 24 4.3 4.3e+02 2.8 0.1 1 19 563 581 563 583 0.94 4 24 4.3 4.3e+02 2.8 0.1 1 19 645 663 645 665 0.94 5 24 4.3 4.3e+02 2.8 0.1 1 19 727 745 727 747 0.94 6 24 4.3 4.3e+02 2.8 0.1 1 19 809 827 809 829 0.94 7 24 4.3 4.3e+02 2.8 0.1 1 19 891 909 891 911 0.94 8 24 4.3 4.3e+02 2.8 0.1 1 19 973 991 973 993 0.94 9 24 4.3 4.3e+02 2.8 0.1 1 19 1055 1073 1055 1075 0.94 10 24 4.3 4.3e+02 2.8 0.1 1 19 1137 1155 1137 1157 0.94 11 24 4.3 4.3e+02 2.8 0.1 1 19 1219 1237 1219 1239 0.94 12 24 4.3 4.3e+02 2.8 0.1 1 19 1301 1319 1301 1321 0.94 13 24 4.3 4.3e+02 2.8 0.1 1 19 1383 1401 1383 1403 0.94 14 24 0.97 98 4.8 0.5 1 23 1465 1487 1465 1487 0.95 15 24 4.7e-05 0.0047 18.4 1.8 1 23 1500 1522 1500 1522 0.97 16 24 0.0061 0.61 11.8 6.3 1 23 1528 1550 1528 1550 0.98 17 24 0.00011 0.011 17.2 7.0 1 23 1557 1579 1557 1579 0.99 18 24 5.3e-05 0.0053 18.2 0.2 1 23 1585 1607 1585 1607 0.93 19 24 3.6e-06 0.00036 21.9 0.1 1 23 1613 1635 1613 1635 0.98 20 24 3e-05 0.003 19.0 1.2 1 23 1641 1664 1641 1664 0.95 21 24 6.8e-05 0.0068 17.9 1.5 1 23 1670 1693 1670 1693 0.96 22 24 0.00037 0.037 15.6 1.3 2 23 1700 1721 1699 1721 0.97 23 24 5.2e-05 0.0052 18.3 1.0 1 23 1727 1749 1727 1749 0.97 24 24 0.0086 0.86 11.3 0.2 1 23 1755 1779 1755 1779 0.94
Sequence Information
- Coding Sequence
- ATGAACCGTGTTGCGAACTGCTTCATTTGCAGCACCAGCACCGGCGCCCACAACACCATCAGCCTCATCCAAGATACTAGCAATCTTCAATCTGGAAAGAAGCTACTGGATATAGTAAGTGAGATAGCTGAGAAACCGTTGCAGGAGGAAGATATACACTCAACCGTAATATGCAAGAAATGTAGCCAGACCTGCAAGGAGTATGACGATTTGCAAGtcaggttaaaacatatcaaaaccgAGCTCCACGAGCAGATACACAAAACCAATGAGAGCCCCACCAAGTCTGAGGGCAGAAAGATAGTTCTGCCCGCTTCTAAATTACACCCGCTGCCTCCGGACTTTGTGCTCAATGTGGGACATCTTCCAGGCACTAGTGGTTTGGTGCTGCCGCTGAAAAACAAGaatacaACAATCCCCTCCACATTAAGCCTCAAAGTGACTGTCGGTACTTCAGTCCTCACACAAAGCATAAAGACCACTTCAGCCTTAGCTCAAAACATAATAATTCAGAATGCAGAGAGCGACGAGCAGGCGGACAACTCCAACGAATTGATATTTGAAGAAACCAGTTTGCCGAGGGATTTTATGACGTCGGTTGTACTGAAACGGTTAGAGCATGATGGTGATATCAATAATGATGACCAGCCTATGGAAATTGATGAAGAGTGCTCGTATGCTATAGTCACGCAAGAAGAAAACACGAATGACGACTCAACTGAAAAGGAGaaatCAGAACAGTCGAGCATGTTCGACGTGCGGCTCCTGTCGACGATAGAAGACAGCGAGGACGGCGAGCGGACCCGCGGGCAGTACATAGTCGGCAAGCTCGAGATACTGAGCGAGAGGGAGGATGAGGACGAGGAGGAACACACCGTGGTGATGTCCCGCGACAGCTCCGTGCTGCGCGTGCTGGCCGGCCCCGACCAAGatgACGACGAATCCCAAATAGAGTTGCAGGTTTCCGGGGATGAAGAAACGGCTAACGCCATCATTGCGGCGGCGAGAGAACAAGGGGGTGCTTTCATCAAGGTCGAATCGGGAGAGATGTACAGGGTGAAGTCTGTGCAGAGCAAACCCAACGACGACGAGGATAAAGAAATCCCGGACCATGTACCGAGCCGACCCGCGGGCTGGACGGGCGAGGCAGCGACGTTGATGCGGCACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGTCAGTCACCCCGCTACTATATCCATGTCGCATACTCTGACAGTAGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGGCCATTGTTAACATGCGGGCGGCGCACGCGGCGCGCGTCTACATCTGCGGCACCTGCGCGCTCGTGCTGCGGCGCCGCGACCAGTACCACCAGCACGTCGcACAacatacaaaagaaaataagggtcAAGACAAAATCAAACTCCACGAATGCGATGTGTGTAACAAGAAATACAGTAATAAGACCCTCCTCGCGCAGCATATGAACCTCCACGCAGGGCAGCGGCCATATTCGTGCGAGATCTGCCACAAGACTTTCGCCTCTAAGTACACGCACCAGTCCCATCTGAAGACGCACCTGGATCGCCCCCGGCCGTTCAAGTGCGCGAATTGCGGCAAATGTTTCTACACGCTGCAGAACCTCAACCAGCACCATAAAACGCATTCTGGCATCAAGGAGTTCGAATGCACTGTCTGTGGCAAGGCGTTCGGCACGCAGCACAACCTGGAGATGCACGGCGTGGTGCACTCGGGCCAGAAGCCGTTCGTGTGCGGCGTCTGCGGGAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGGACCCACACCGGCGAGCGGCCGTTCGCGTGCGACGTGTGCGGCGCGACGTTCTCGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACTACGACGACAAGCGCTACCAGTGCACCGAGTGCCCCAAGCGGTTCAAGCGGAGGAGGCTATTAGATTACCACATAAAGGCGTCGCACACGGGCGAGCGCCCGCTCAAGTGCGAGGTTTGCTCCTCGACGTTCGTGTACCCCGAGCACTATAAGAAGCACATCAGGATTCACAGCGGGGAGAAACCTTACGTCTGCGAGGTGTGCGGCAAATCGTTCAACTCGCGCGACAACCGCAACACGCACCGGTTCGTCCACAGCGACAAGAAGCCGTACGAGTGCCTCGTGTGCGGCGCCGGGTACATGCGCAAGCAGCTGCTCTACACGCACATGAACACCAGCGGTCACCTGGCCGAGTCGATCGTCGTGAACCAGCCGCGCGTCACCATTCAGAAGATATCCAGCGCCACGCCCCTCGACAGTgTTTACGAGTCAACGGAGGAGTGGGAGTTAGATACGGAAGGAGCGAAGGCCGGTGGTAAGCGAAGTTTTTTAGCCTATTTGAGTGTCTGCTGGGTAAAGACCGCTCGCCTACACTACGAGGCTCTGTATAATGCCTATCTTCCACTGCGAATTGAGCGGGCCCCCTACGGACTCCGTTTGGCTTACAACGACAACCACGGCACGGTGTACATCGGCGATAAGAAATACATTCTGCAAGAGAGCAGTGGCTCCCTCAGTTTGGTGCATGATGGCGAGGAGTATCTTACATATAACCTGGACGAATTAAAGACTGACACAAACTTAATAGAGACAGTGAGCGAGGAGCAGATAGGGGAAGATGGTCAGGCGGGCGGGGGTGGGGGCGGCGCGGTGCGCGCGGTGCCGGTGGCGCTGcccggcggcgcgcgcggctgGCTCGCCGTCCACCCCTAG
- Protein Sequence
- MNRVANCFICSTSTGAHNTISLIQDTSNLQSGKKLLDIVSEIAEKPLQEEDIHSTVICKKCSQTCKEYDDLQVRLKHIKTELHEQIHKTNESPTKSEGRKIVLPASKLHPLPPDFVLNVGHLPGTSGLVLPLKNKNTTIPSTLSLKVTVGTSVLTQSIKTTSALAQNIIIQNAESDEQADNSNELIFEETSLPRDFMTSVVLKRLEHDGDINNDDQPMEIDEECSYAIVTQEENTNDDSTEKEKSEQSSMFDVRLLSTIEDSEDGERTRGQYIVGKLEILSEREDEDEEEHTVVMSRDSSVLRVLAGPDQDDDESQIELQVSGDEETANAIIAAAREQGGAFIKVESGEMYRVKSVQSKPNDDEDKEIPDHVPSRPAGWTGEAATLMRHMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVGQSPRYYIHVAYSDSRPLLTCGRRTRRASTSAAPARSCCGAATSTTSTSAIVNMRAAHAARVYICGTCALVLRRRDQYHQHVAQHTKENKGQDKIKLHECDVCNKKYSNKTLLAQHMNLHAGQRPYSCEICHKTFASKYTHQSHLKTHLDRPRPFKCANCGKCFYTLQNLNQHHKTHSGIKEFECTVCGKAFGTQHNLEMHGVVHSGQKPFVCGVCGKGFARRAEVKDHMRTHTGERPFACDVCGATFSQRSNLHSHKRATHYDDKRYQCTECPKRFKRRRLLDYHIKASHTGERPLKCEVCSSTFVYPEHYKKHIRIHSGEKPYVCEVCGKSFNSRDNRNTHRFVHSDKKPYECLVCGAGYMRKQLLYTHMNTSGHLAESIVVNQPRVTIQKISSATPLDSVYESTEEWELDTEGAKAGGKRSFLAYLSVCWVKTARLHYEALYNAYLPLRIERAPYGLRLAYNDNHGTVYIGDKKYILQESSGSLSLVHDGEEYLTYNLDELKTDTNLIETVSEEQIGEDGQAGGGGGGAVRAVPVALPGGARGWLAVHP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -