Basic Information

Insect: Acleris laterana
Gene Symbol: -
Assembly: GCA_963966035.1
Location: CAWYPN010000471.1:1-21717[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.23 23 6.8 0.2 1 23 331 353 331 353 0.98

2 11 0.00062 0.062 14.9 7.4 1 23 360 382 360 383 0.95

3 11 0.076 7.6 8.3 1.8 1 23 387 409 387 409 0.97

4 11 0.03 3 9.6 1.1 1 23 414 437 414 437 0.97

5 11 0.0093 0.93 11.2 0.4 1 23 441 464 441 464 0.94

6 11 0.0013 0.13 13.8 0.6 3 21 478 496 477 501 0.93

7 11 1.2 1.2e+02 4.5 0.4 2 23 555 577 554 577 0.94

8 11 0.012 1.2 10.9 1.0 2 20 593 611 592 614 0.89

9 11 0.00024 0.024 16.2 0.3 1 23 620 642 620 642 0.98

10 11 2.4e-06 0.00024 22.5 1.4 1 23 649 671 649 671 0.98

11 11 1.2e-05 0.0012 20.3 1.8 1 23 677 700 677 700 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.23	23	6.8	0.2	1	23	331	353	331	353	0.98
2	11	0.00062	0.062	14.9	7.4	1	23	360	382	360	383	0.95
3	11	0.076	7.6	8.3	1.8	1	23	387	409	387	409	0.97
4	11	0.03	3	9.6	1.1	1	23	414	437	414	437	0.97
5	11	0.0093	0.93	11.2	0.4	1	23	441	464	441	464	0.94
6	11	0.0013	0.13	13.8	0.6	3	21	478	496	477	501	0.93
7	11	1.2	1.2e+02	4.5	0.4	2	23	555	577	554	577	0.94
8	11	0.012	1.2	10.9	1.0	2	20	593	611	592	614	0.89
9	11	0.00024	0.024	16.2	0.3	1	23	620	642	620	642	0.98
10	11	2.4e-06	0.00024	22.5	1.4	1	23	649	671	649	671	0.98
11	11	1.2e-05	0.0012	20.3	1.8	1	23	677	700	677	700	0.95

Sequence Information

Coding Sequence: TTTCCAAACGAGCCAGCTCTCCGGACCTCATGGTTACGAGCCCTCGGTAAAGAAGAGTGGGAGCCAAAGGAGCGCAGTGCGGTGTGCTCGGAGCACTTCCTGTGTGAAGATCTGTACGAGACTAAAAGTGGACTGCGGAAGGTGAAGTCGGGGGCTGTGCCCATTGTCTTACAGAACACGAGTAACTGTGAATATGGAGATTCCACTGACTTGAAGGTCTGCCGCATATGCCTGACAATGGAAGGGAGGCTGCTGTCCatcaaaaaacataaattacagGAAGCTTACTACCAACTCACAGGTCTTacaATGCGCGTTGAAGACCAGCTGCCGCAGAGGCTGTGCGCGGAGTGCGCGCACCGGCTGGCGAGCTGCATCCGTTTCCGGAGCAAGAGCCTGCGCGCGCACGCGCTCTTGTGGGAGATCGTCAGCAAACAGGACGCGCTCTCTCTACAAAGCATAGCCActataaacagagacaacaacAACCTGTCATCCTGTCTGACCCTCAAATATTACGACCCTGACTACTGCGATGCCTCCCTCCATCACGCCGAGCAAAAGGAACCGATATGCGAAGTCAACATCACAGATGAAATAGAAATTAAACACGAAACCAACGACTTTAGTGAATTCAACGAGATCAAACAAGAGAACTGTTTTAATCTCAATGTGAATGACGATGGGAATGACGCGGATTTTGTGACGTCAGATAAGGAATATTCGACGGATGATAGTTTGCCGCTGGAAGCTCGGAGGACGAAAAAAGAGAAGGTCAAGGAGAAGGTTGAGAAGAAGGAAGTTGTCAAGAAGGTTAGAAAAAAACCCGTGGAGAAAGACCCGACCCAACCCAAGATCGACCGGCGCCGGAAGCCGTTCCTCAACGACGACCTGAACGAGACCCTGTTCACGATCACGGACCTGACGCACGCCGAGCAGCTCGCCGAGATCCTGAAGAGGCAGGAGTCGGCCAACTACAAGAACTCCGTGTTCAGGTGCGAGGCCTGCTTCAAAGGTTTCCTCGACGAGGACGCCTACAACAGCCACATCATCAGACACACCGACCAATGCGGCGTGTATGAATGCAGTATATGCAAAACCCACTTCAAGCACCCGCACGCGCTGCGcaagcacatcaccgcgcaccACACGCAGCGGTTCAGCTGCAACCAGTGCCCCTACGTCACTACCCACAGGCAAACAGCCCGGCTGCACGAGAGATGGCACAAGGGCACCAAGTACCAGTGCCCGCACTGTCCGGACGAGTTTGTTAAATTCACGACGTACATGGGCCACATTCGCATCAAGCACCCCTCGGACTTCGTCTGCCAACTCTGCGGGTACTCCTTCGTCAGCGAGAAGGGGATAGAGCTGCACAAGAAGCTGAAACACCGGCTGAGCGATCCACAGATACCCGAGGACGGGCCCTTCTGCGAACTGTGCAACGTGCGCTTCGTGTCCAGCGAGGCTCTGCGCCGGCATATGCACGTGTCGGCGCGGCACACCGGTGGCGACAAAGGTCATAAAGAATCCAACAAGCCCAAGAAGCCCCGCAAGTCGCGGGAGCCCGGCGCGCGGGACCGCGGCCGCGACAGCCGGGACTCCTCCTCCGAGAAGGGGCGCCGGTACCCGAGCCAGATGCGGAAGGCCGAGGGGCCTATACCCTGCGAGCAGTGCGGGATGCAGTTGGAAGACTCCCGGGCGTACCACGGCCACTTCCGCCGGATGCACCCCGACAAGAACCGAACCAACTACCCGTCCATGAAGTCGCCATGCATGTGCGAGGTCTGCGGCCGCATGTTCCAGAGTTATGCGCTGCTCAAGGACCACACGTGGACGCACACCGGCGAGCGGCCGTTCTCGTGCGACGCGTGCGGCAAAGCGTTCCGCATGAAGCAGCGGCTCGTGGCGCACCGCCGCGTGCACAGCGCGCAGCGCGCCAGCTACGTGTGCGGCGTGTGCGGCAAGCCCTTCAGCACGCACAGCAACCGGCAGCGGCACATGTTCATCCACACCGGGCTGAAGCCGTTCAAGTGCGAGATGTGCGGCAAGTCGTTCAAGCACGCGAGCGAGAAGCGCGCGCACATCACCTACGTGCACCTCAAGAAGCCCTGGCCCAAGCGCGCGCGCGGCAAGCGCCGCCCCGACAATAGACagGGCACGCAGCATCCGCAAATGTCAGTAGCCACAGGCGCGAGCGAGATGGACATAGTTCAGCCGCTCTGGCCTTCCTGCGACCCGAAGCTAGCCGACATCAACGCCCTGATGGACGACAAGCCGATGTACTATAACCTGAAGATATAG
Protein Sequence: FPNEPALRTSWLRALGKEEWEPKERSAVCSEHFLCEDLYETKSGLRKVKSGAVPIVLQNTSNCEYGDSTDLKVCRICLTMEGRLLSIKKHKLQEAYYQLTGLTMRVEDQLPQRLCAECAHRLASCIRFRSKSLRAHALLWEIVSKQDALSLQSIATINRDNNNLSSCLTLKYYDPDYCDASLHHAEQKEPICEVNITDEIEIKHETNDFSEFNEIKQENCFNLNVNDDGNDADFVTSDKEYSTDDSLPLEARRTKKEKVKEKVEKKEVVKKVRKKPVEKDPTQPKIDRRRKPFLNDDLNETLFTITDLTHAEQLAEILKRQESANYKNSVFRCEACFKGFLDEDAYNSHIIRHTDQCGVYECSICKTHFKHPHALRKHITAHHTQRFSCNQCPYVTTHRQTARLHERWHKGTKYQCPHCPDEFVKFTTYMGHIRIKHPSDFVCQLCGYSFVSEKGIELHKKLKHRLSDPQIPEDGPFCELCNVRFVSSEALRRHMHVSARHTGGDKGHKESNKPKKPRKSREPGARDRGRDSRDSSSEKGRRYPSQMRKAEGPIPCEQCGMQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHTWTHTGERPFSCDACGKAFRMKQRLVAHRRVHSAQRASYVCGVCGKPFSTHSNRQRHMFIHTGLKPFKCEMCGKSFKHASEKRAHITYVHLKKPWPKRARGKRRPDNRQGTQHPQMSVATGASEMDIVQPLWPSCDPKLADINALMDDKPMYYNLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00009430;
90% Identity: iTF_00010222; iTF_00009430; iTF_00009095; iTF_01464477; iTF_01464225;
80% Identity: iTF_00010222;