Basic Information

Insect: Acleris laterana
Gene Symbol: -
Assembly: GCA_963966035.1
Location: OZ014450.1:13279741-13285946[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.6e-05 0.0016 19.8 6.4 1 23 231 253 231 253 0.99

2 11 0.0042 0.43 12.3 4.4 1 23 259 282 259 282 0.96

3 11 0.0082 0.82 11.4 3.2 1 17 291 307 291 318 0.92

4 11 0.00091 0.091 14.4 0.4 1 23 320 342 320 342 0.98

5 11 0.017 1.7 10.4 1.1 1 23 348 370 348 370 0.98

6 11 0.0012 0.12 14.0 0.2 3 23 378 399 376 399 0.94

7 11 0.012 1.2 10.9 2.1 2 23 405 424 404 424 0.96

8 11 5.2e-06 0.00053 21.4 2.5 1 23 430 452 430 452 0.97

9 11 9.5e-06 0.00095 20.6 2.3 1 23 458 480 458 480 0.99

10 11 0.034 3.4 9.4 2.0 1 23 486 509 486 509 0.96

11 11 0.0096 0.96 11.1 2.3 1 19 515 533 515 533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.6e-05	0.0016	19.8	6.4	1	23	231	253	231	253	0.99
2	11	0.0042	0.43	12.3	4.4	1	23	259	282	259	282	0.96
3	11	0.0082	0.82	11.4	3.2	1	17	291	307	291	318	0.92
4	11	0.00091	0.091	14.4	0.4	1	23	320	342	320	342	0.98
5	11	0.017	1.7	10.4	1.1	1	23	348	370	348	370	0.98
6	11	0.0012	0.12	14.0	0.2	3	23	378	399	376	399	0.94
7	11	0.012	1.2	10.9	2.1	2	23	405	424	404	424	0.96
8	11	5.2e-06	0.00053	21.4	2.5	1	23	430	452	430	452	0.97
9	11	9.5e-06	0.00095	20.6	2.3	1	23	458	480	458	480	0.99
10	11	0.034	3.4	9.4	2.0	1	23	486	509	486	509	0.96
11	11	0.0096	0.96	11.1	2.3	1	19	515	533	515	533	0.98

Sequence Information

Coding Sequence: ATGGCTAGATCCAAGActaaagaaaaaccaaaaaaaagaactaaaactAAGTTATCAACAGGTAAGAAAAAGGAGAGAATGAGACATGAGCTCAAGTTTCTTTCCCCAGACGAGAAGATGGAATATTTACTGGAAAATGGCCATTTGATTAAAGACAGACTGTTTAATGAAATGTCTTTTAAGGAAGGGCAAATTTTACCAAAAGAGTCTATGGCTATCGGTCCAGATGACCTCAAGTCCAAATCTGGCGCCCTGAAACAGAGGAAAAGGCATAATTTAAAGTACTTGGATCAAATTTTAATGACTGAGTTTAACATCAGTCCATATCCAATTAACAGTGATATACAAACAGAAAAACCTCCAAATAGGGAAAACAACAATGATACTGATATTAGCGACCATAACAGCACTATTACCAGTTCAAAAGATACTACCAAAGAGACCGAAGTAACTAAAGATGCAGATAAAACTATTGATAATGCTCCAGAAATTGGAAATTCAGATACCACAGTGTCTCAGGATGCATCCAGTTCTAAAGCAACTGGCAGTAAGAAATCCCAAAAAGTTAAGGCAGATAAAAAAATCAAAGCCCCCCAcgttcataaaaagtacaaatatcAGCTTGTTGGAaagttaaaaaaagttaataaattgaAACTCAGCAATGGCATTGTTCTTTCTTTTGGGTCGTATGAGTGCGACTACTGCCACAAAACTCTCAACACCAAATCATGTCTACAGCGACACATTAAGATGCACCTTAATATAAAACCATATGCGTGTGCCCACTGCCCTATGAAATTTGTACAATGCTGTAACTGGAAAGCACACATGAAGAATATACACCCGGAAGCAGCTGCCAAGGAGACATTTGTATGTTTTAAATGTGGAAAAGCATTTAAATCCAAAGAGGAATTGAACACCGATTTAGCCAAGCACTATAAGAAAGACCATCCGTACAAATGTGTATTTTGTGACAAAGCTTTTGCCACCCATGCATTAATGGCAGAGCATGAGAAAGTTCACATGAATCCTGGCCGCTACACATGTGCTGTCTGCCCCATGACCTATCAGTCTCGCACTCGCTATTCGCAGCACATTAAAAGTCACAAGGAGGGAAATGATCTGTTTTGCCCGTATTGCAATAAGGCATTCTTAAGGCCCAGTTCTATCAAAAGGCATGTGGAGATTTACCATTGCGGGATCAGGATGGAATGTCCGATCTGTAAGAAGAAGTTGAGAGGGCATCTCACCGAGCACATGCGGACACATGACAATGAGCGCCCACATATTTGCTCTATATGTGGACAGCGATTTACTCAGTCTACTCAGTTAACTGTGCACAAGCGAAGCCACAGTGGAGTTAGACCGTATACCTGTAGGATTTGCAAACGGTCATTTGCACACTCTAACGCTCTGATGCTGCATATAAGACGCCACACTGGTGAAAAGCCATTCACTTGTGCGATGTGTCCAGTTTCATTCTCACAGCTACCCCACATGAAATGCCATATGCTTAGCATACATGGAAAAGAAATGTGctataaatgtgaaaaatgtaACACCTTTTTCAAGCTGAAATCAAAATTAGAGCTCCATGATCTTGACTGTGAGGCTACGGTCCAGCAATATACTGTTGATGGACAAGACCTAGCTGCAGCGGAAGACGATCAAAAACCGGCTATGACTATTTCCAAAATGAGGTTCCTGCTTGCCCTGCTTTTCACCATGATCGCATCCAAAGATAAACTGAAATGCCTAGGTTTCAACAAACGGCTGATAGACGATATCCTCGTGGAGTCAGTGGAAGCCATGGGTCAACGTCCTAGCAAGAGCAAGTCCGCCGACCCCCTGGTCCGTCTCAAAGCCAACATAGCCATATTGCTTAAGGGAACCGTGCCTAAGGAACAGATGATGAAGTTCGAGGAATCAAACAAAACTACCGAAGATATACTAGAGCTGCTGGTTGGCGAGAAATCTAAAAAGAAATAG
Protein Sequence: MARSKTKEKPKKRTKTKLSTGKKKERMRHELKFLSPDEKMEYLLENGHLIKDRLFNEMSFKEGQILPKESMAIGPDDLKSKSGALKQRKRHNLKYLDQILMTEFNISPYPINSDIQTEKPPNRENNNDTDISDHNSTITSSKDTTKETEVTKDADKTIDNAPEIGNSDTTVSQDASSSKATGSKKSQKVKADKKIKAPHVHKKYKYQLVGKLKKVNKLKLSNGIVLSFGSYECDYCHKTLNTKSCLQRHIKMHLNIKPYACAHCPMKFVQCCNWKAHMKNIHPEAAAKETFVCFKCGKAFKSKEELNTDLAKHYKKDHPYKCVFCDKAFATHALMAEHEKVHMNPGRYTCAVCPMTYQSRTRYSQHIKSHKEGNDLFCPYCNKAFLRPSSIKRHVEIYHCGIRMECPICKKKLRGHLTEHMRTHDNERPHICSICGQRFTQSTQLTVHKRSHSGVRPYTCRICKRSFAHSNALMLHIRRHTGEKPFTCAMCPVSFSQLPHMKCHMLSIHGKEMCYKCEKCNTFFKLKSKLELHDLDCEATVQQYTVDGQDLAAAEDDQKPAMTISKMRFLLALLFTMIASKDKLKCLGFNKRLIDDILVESVEAMGQRPSKSKSADPLVRLKANIAILLKGTVPKEQMMKFEESNKTTEDILELLVGEKSKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00009378;
90% Identity: -
80% Identity: -