Basic Information

Insect: Acleris laterana
Gene Symbol: -
Assembly: GCA_963966035.1
Location: OZ014464.1:7178975-7187708[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.5e-06 0.00065 21.1 1.9 1 23 98 120 98 120 0.96

2 13 0.0043 0.43 12.2 2.0 1 23 127 149 127 149 0.97

3 13 7.1e-08 7.1e-06 27.3 1.6 1 23 187 209 187 209 0.99

4 13 0.00021 0.021 16.4 0.3 1 23 215 237 215 237 0.94

5 13 5.3e-06 0.00053 21.4 3.3 1 23 286 308 286 308 0.99

6 13 0.48 48 5.8 0.1 1 10 315 324 315 337 0.74

7 13 1.5e-06 0.00015 23.1 0.7 1 23 371 393 371 393 0.98

8 13 1.5e-05 0.0015 20.0 2.2 1 23 400 422 400 422 0.98

9 13 1.5e-05 0.0015 19.9 2.2 1 23 428 450 428 450 0.96

10 13 2.3e-05 0.0023 19.4 1.0 2 23 456 477 455 477 0.98

11 13 4.6e-08 4.6e-06 27.9 0.8 1 23 483 505 483 505 0.98

12 13 2e-06 0.0002 22.7 1.3 1 23 511 533 511 533 0.98

13 13 4.8e-07 4.8e-05 24.7 0.6 1 23 539 561 539 561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.5e-06	0.00065	21.1	1.9	1	23	98	120	98	120	0.96
2	13	0.0043	0.43	12.2	2.0	1	23	127	149	127	149	0.97
3	13	7.1e-08	7.1e-06	27.3	1.6	1	23	187	209	187	209	0.99
4	13	0.00021	0.021	16.4	0.3	1	23	215	237	215	237	0.94
5	13	5.3e-06	0.00053	21.4	3.3	1	23	286	308	286	308	0.99
6	13	0.48	48	5.8	0.1	1	10	315	324	315	337	0.74
7	13	1.5e-06	0.00015	23.1	0.7	1	23	371	393	371	393	0.98
8	13	1.5e-05	0.0015	20.0	2.2	1	23	400	422	400	422	0.98
9	13	1.5e-05	0.0015	19.9	2.2	1	23	428	450	428	450	0.96
10	13	2.3e-05	0.0023	19.4	1.0	2	23	456	477	455	477	0.98
11	13	4.6e-08	4.6e-06	27.9	0.8	1	23	483	505	483	505	0.98
12	13	2e-06	0.0002	22.7	1.3	1	23	511	533	511	533	0.98
13	13	4.8e-07	4.8e-05	24.7	0.6	1	23	539	561	539	561	0.98

Sequence Information

Coding Sequence: ATGTCATATATGaagataaaacataatcaacaaaaaaaacaaatattggaGCAAAAGGCAGTTCAAGATGAATCCAATAAACCCAAGAAGTCACCTATACAAGAAGTGCAGGGGATCCAAGACCAAGAAGGAAGCAGTTTTGACCAAGCTGCCTCAACAAATACTGTGCATCTGGCTGCTGAAACCAACAATGAGTGCGCAGAAACCTTCTCCGATGACAACCTTAGCTCAAGTAGCAAAGATATGTTAGATTCTGAGATGCGCTCTGGTCAAATTGACGTTCAAAATTTACACGCATGCCAGACTTGTGAGAAAATGTTTCCTAGTAAACCAAGCCTTAATAAACACATGCGCTCACATAACACTGGAGGAGTTACTTACGCTTGCGATATTTGTAGAAAACATTTTCCAAAGCTGATTACTATGCAGCAACACAGACGTCTTCACACTACAGTTGAAATCAGCATTGAGTGCGGTGAAAACTCCGACAACCTTAGCTCGAGTAGCAAAGACATTATGGATTCTGAGTGTTCCGTTCAAGTTGGCGATGAAGAGTTCTACACATGCCAGACTTGTCCGAAAACTTTCGACAGGAAATCAAGCCTAGCGAATCACATGCGTTCGCATCAGCAAGAAATAACATACGCGTGTGATGTTTGTGGGAAACGTTTCGCGAGGTTGACGACCATGCAGCAACACAGGGGCCTTCATACGGCTGTGTCAACTAACCCTGCGAAGCCAGCCTCTCAAACCAGCGATGGGCCCGCTGAAGACTCAGGCGAGAAACCTAACTCAAGTAGCAAAGATATGTCAGGCTCTGAGCATGGTTCTGTTCAAATTGACGACCAGGGCTTGTACACATGCCAGACATGCCAGAAGAAATTTGTAAAGAAATCAAGCCTTACTAATCACGTGCGTTCACATCAGGCGCGAGAAATGCCTTACGCATGCAATATTTGTGGAGAACGTTTTTTAAGGTTGAATATAATGCGGCAACATAAAGAAATTCATGCAGTTACATCAACTAAGTCTGCGGAGCACCTGGCACCTGAAACCAGAAATGAGTCCGCTGAGACCTCTGACGCCGACAGCTGGAATAGTGAAGATACCTACCCGTGCCAGATTTGCGAGAGGTCATTCGACATGAAATCAAGCCTTTCTAATCATATGCGCTCACATAAAAGTGAAGAAACGACTTACCCGTGTGATATTTGTGAAAAAAGCTTTTCACAGTTGACTAGCATGCAGCACCATAGACGGCTTCATACGGGTGAGACGCCTTATCTGTgtaaagtttgtaaaaaacGGTTCAGGACCTCAGCTGCTCTTTCGTCCCACAAGCGAACACACAGCGAAAACCTTCAAAAATGCGAATACTGCAATAAGGAGTTTGTATATAACTTCGCTTATGAATCGCACATGCGAAGCCACACTGGAGAGAAACCTTTTACATGCGAAGTTTGTAATAAAAAGTTTTCCCAAAACTCTGCGTTGAATCGCCATATGCTCATCCACAAAGCAATAGCTCCGTTCTCTTGCGATGTTTGTGCTAGAAAATTCAGACAACGGAGTGAATTGAAAGTACATATGAGAAATCATACGGGGGAGAGACCTTACCCTTGTAACATGTGTAATAGGGGATTTACGCAAAAATCGAGCCTAATTACTCATATGAAAGCTCATATAAAGAAAGAACGAAAGCGCAAGCTTAAGGAATCAAAAGAAGCCGCCGGAAAAAAAAAAGCTAAGCCGGAGGTAGTGCTTGTGAAGGAGGAAAGGGAGGAAATTGAGGAGTCTTGTGAAGAGCCAGGATGGGTTGAGACGCCGGAGAAGCCAGTGCGTGTTAAAGTGGAGGAATTGGATGCCCGTGCAAGGTCAGAAGAGTCGCAAGAAGATTTTTTTGTTGAAGAGAAACCTATTAATAGTATGGAAATGAACTGTTATGAACCTACGTTACAATACGAGCGCGAGTTCATGTCCATCGTGTTGAGGCGGCTTCACCCGCCTCGCCGCATTCCTCCGCAGTCCAGGGACTCGGAAAAACGAAGTTACTTTAGCGCCATCTCAGACACTCTTCATTCGAGACTAAAAAGACAGAAAGAGATGGAGCTGATGTAA
Protein Sequence: MSYMKIKHNQQKKQILEQKAVQDESNKPKKSPIQEVQGIQDQEGSSFDQAASTNTVHLAAETNNECAETFSDDNLSSSSKDMLDSEMRSGQIDVQNLHACQTCEKMFPSKPSLNKHMRSHNTGGVTYACDICRKHFPKLITMQQHRRLHTTVEISIECGENSDNLSSSSKDIMDSECSVQVGDEEFYTCQTCPKTFDRKSSLANHMRSHQQEITYACDVCGKRFARLTTMQQHRGLHTAVSTNPAKPASQTSDGPAEDSGEKPNSSSKDMSGSEHGSVQIDDQGLYTCQTCQKKFVKKSSLTNHVRSHQAREMPYACNICGERFLRLNIMRQHKEIHAVTSTKSAEHLAPETRNESAETSDADSWNSEDTYPCQICERSFDMKSSLSNHMRSHKSEETTYPCDICEKSFSQLTSMQHHRRLHTGETPYLCKVCKKRFRTSAALSSHKRTHSENLQKCEYCNKEFVYNFAYESHMRSHTGEKPFTCEVCNKKFSQNSALNRHMLIHKAIAPFSCDVCARKFRQRSELKVHMRNHTGERPYPCNMCNRGFTQKSSLITHMKAHIKKERKRKLKESKEAAGKKKAKPEVVLVKEEREEIEESCEEPGWVETPEKPVRVKVEELDARARSEESQEDFFVEEKPINSMEMNCYEPTLQYEREFMSIVLRRLHPPRRIPPQSRDSEKRSYFSAISDTLHSRLKRQKEMELM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -