Basic Information

Insect: Acleris laterana
Gene Symbol: clz9
Assembly: GCA_963966035.1
Location: OZ014438.1:65393800-65396692[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.8e-07 0.0002 22.1 0.0 4 41 11 47 8 50 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.8e-07	0.0002	22.1	0.0	4	41	11	47	8	50	0.83

Sequence Information

Coding Sequence: ATGGCACCTAAAAAGAATTACACGCCTCTTCAAATGGCACAGGCGGTAGAAGCAGTCAGAAAAGGTGAGAAAATTGCCACTGCTGCACAAAAGTTTGGTGTACCCAGAATTACATTACATGATAAGATTTCCGGTAAGACTCCAGTTGAATGTTCCATGGGCCCTAAAACATATTTGTCAATAGAAGAAGAGGCTATTTTAGAAAAATGGAAGTGGAATCTTATCTACGCGAAAAAGATCTGGCAGATGTATTACAACAGCCGGCAAGAATATTCAACAGACGAAAGCGCCTTTTATTTGTCGCCTAAGGCTGGTAAAGTTCTTGCAAAAAAAGGCGACAAACATATCTACCAATCCTGCGGAGATGAAAAAGATAATTTAACAGTATTAATTACTGGAAATGCCGCTGGACAATTGGCACCACCCATGGTAGTATTTGCATATGAGAGAATTCCGTCCACAATTTCATCTCAGTTTCCCGAAGATTGGGCAATCGGACGTTCACAGAGTGGCTGGATGTGTGGCAGCAAGTTTTACGAATACATAGCGAACGTTTTTAATCCATGGCTGATACagcaaaatatccaaaaacctGTATTGTTCTTCTTGGACGGTCATCGATCGCATTTGACCCTGCATTTGTCGAATTTTAGTGCTGAAAATGGCATAGAAGTCATAGCACTACACCCAAACAGTACGCACATTTTACAGCCAATGGATTTGGCTATATTCAGACCACTGAAATCATACTGGAAAAAAGCAGTAAAAGACTGGAAACTACAAAATTTAGGAAAAAATTTGACAAAAGATAAATTTGCCCCTGTCCTTAAAACAGCGTTGCAATCGCTCACTGGAGATTCCATTAAGAATGGTTTTCGCGCTGGTGGTTTGTATCCTTTTGGTCCAGACTATATCGatctaactaaaataaaatctcgaTCTCGACAAAACCCGCAAGATGCAACGGAACAGGCACTCTTTTTTAACTTCTTAGAAAAGGAAATAGTGGCAAAGTTGGGGACAGAAAAGTTGCAGTTTTTCAATGAACTCTTTTATAAAGGACGAGATGAATTAAATTCTCAGTTAAATGAGGAAGATACGTCACTGTATATAATATGGGCTAGCAATAAACAGAGAGTTCACTTTAATAAACGATCCATGCAAGCTGAAGTTGATTTGATTCAAGAAGATGTTTCCAATCTAGCAGAAAGTTATGATAACAATGTTGCAAATTCAGTTCCTTTAAATGAAACCACAACATCTAATAACTCTACATCGAATATGACTCTACAGACACACGTAACTAGTGGACAAgaatcaaaagaaaaaaacaataacacatCAATTATTGATAAGTCAAGTTGTTCCAACAAAACAGATTCAGTTGCATTACCTTCGACATCTTGCTCTTCAACTTCAGCTGCCGCAGAATCCAGAACTTCAAAAGAGACGACCGGACCCGAACCAAAAGAAAAGTCTAATGAGGTGTTGATTGTTAATAAGCAAAGTTCTTCCAACCAAGTAATAAATCCACTTCAGACAGCTTCCGATACCTGCACTTCAACTTCAGCTGCCGCAGAATCCACAACTTCAAAAGAGACGACCAGACCCGAACCAAAAGAAAAGTCTAGTGACGTGTTGATTGTTAATGAGCAAAGTTCTTCCAACCAAGTAATAAATCCACTTCAGACAGCTTCCAATTATACCTGCACTTCAACATTTACCCTCAATGAAAATTCTGTAGTAGAAAAAACATCATCAAAAGAGACGATCACACCTGAATCCAAAGAAAAGTCCAATGAAGCTTTGATCATTAATCAGCCAAGTTCATCGACGCAAGCAAGAGGTTTACTTCAGTTACCTTCAATGTGTATTCTTCAAAGTGCAGCAGAAAAAACACCTTTAAAACAGACGATAGGCCCTAATACATCCAAATCTGTTGCAAATAAAGTGGGAAATACATATATTCCATCGccatttaaacgaaatttatttTGGCCCGGAGAAGATGAAGATAAAAAagggaaaaaaagaaaattaagagAAAAAGTTCCTTCTGCCATCACAAGTAAAACGTGGAGGGATTATCATGAAGCGAAAGAGAACCAAAAACGAGAAACAGCAAGACTAAAAGAACTTAAAACCCAAGAAAGAGAAGAGAAAAGACTGTTAAAAAAGAGAGAGATGGaaaataaaaagcaaaaaagAATAAAAGATAAAGAGAATAAGAAGAAGAAACCAAATAGGATACCAAACCCGAAATTAAATGACACTTCTTCGGACAATACAGACACCGAGGTAAACTATGCAGAAAGTGACGATAGCTACAACGAGGAAATCGAAGAAGAACTAACCGACGAAGATATACCACTGAGCAAATATTCTAAGCCAGCAAAAACATATTCTAGTGGAGATTATGTTATAATCCAATACGAAGGAGAATTTTTCCCAGGCGTAATcaaaaatgttgataaaaacaaatttgaaaTTAGCACCATGACCTTTTCAGTGGGTAACACGTTCAAATGGCCGGAAAAAGATAAAATCTGGTACCAAAAGTCTGACATAGTTAAAGTAATTTCGAAGCCAAAGCTATGTAATAAAAGAGGTTTTTATACGATACCAGAAATGAAAGAATATCTGCATTTCACAATATAA
Protein Sequence: MAPKKNYTPLQMAQAVEAVRKGEKIATAAQKFGVPRITLHDKISGKTPVECSMGPKTYLSIEEEAILEKWKWNLIYAKKIWQMYYNSRQEYSTDESAFYLSPKAGKVLAKKGDKHIYQSCGDEKDNLTVLITGNAAGQLAPPMVVFAYERIPSTISSQFPEDWAIGRSQSGWMCGSKFYEYIANVFNPWLIQQNIQKPVLFFLDGHRSHLTLHLSNFSAENGIEVIALHPNSTHILQPMDLAIFRPLKSYWKKAVKDWKLQNLGKNLTKDKFAPVLKTALQSLTGDSIKNGFRAGGLYPFGPDYIDLTKIKSRSRQNPQDATEQALFFNFLEKEIVAKLGTEKLQFFNELFYKGRDELNSQLNEEDTSLYIIWASNKQRVHFNKRSMQAEVDLIQEDVSNLAESYDNNVANSVPLNETTTSNNSTSNMTLQTHVTSGQESKEKNNNTSIIDKSSCSNKTDSVALPSTSCSSTSAAAESRTSKETTGPEPKEKSNEVLIVNKQSSSNQVINPLQTASDTCTSTSAAAESTTSKETTRPEPKEKSSDVLIVNEQSSSNQVINPLQTASNYTCTSTFTLNENSVVEKTSSKETITPESKEKSNEALIINQPSSSTQARGLLQLPSMCILQSAAEKTPLKQTIGPNTSKSVANKVGNTYIPSPFKRNLFWPGEDEDKKGKKRKLREKVPSAITSKTWRDYHEAKENQKRETARLKELKTQEREEKRLLKKREMENKKQKRIKDKENKKKKPNRIPNPKLNDTSSDNTDTEVNYAESDDSYNEEIEEELTDEDIPLSKYSKPAKTYSSGDYVIIQYEGEFFPGVIKNVDKNKFEISTMTFSVGNTFKWPEKDKIWYQKSDIVKVISKPKLCNKRGFYTIPEMKEYLHFTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00009982;
90% Identity: iTF_00009982;
80% Identity: iTF_00009982;