Alat035357.1
Basic Information
- Insect
- Acleris laterana
- Gene Symbol
- Aper1
- Assembly
- GCA_963966035.1
- Location
- OZ014465.1:8564439-8571599[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.16 86 4.1 0.0 11 28 157 174 156 176 0.95 2 4 0.025 13 6.7 0.0 11 28 238 255 237 257 0.95 3 4 0.16 86 4.1 0.0 11 28 311 328 310 330 0.95 4 4 0.35 1.8e+02 3.0 0.0 11 28 384 401 383 403 0.94
Sequence Information
- Coding Sequence
- ATGTGCCACACGTTGATggaagCCCTACCGCTCCTAGCGCTATGCTCGCTCGCCGCCGCCACCCAGTGCCCCCCCCCAGACTCCGTCAGGTTCCTGATCCCCCATGAGACCGACTGTTCCAAGTTCTACATCTGCTCCCACGGTACCCCGGTGCTGCAGAACTGCCCCGATGGGACGCATTTTAATCCTAATTTCATGGTCTGTCAAAACCCAGTGTTCGCTGGCTGCTCGACCGAGCTGCCTGAAGCGGAGCTGCCTTGCGACTGGCCTTCCTCCGTCCTCTTCAGACCTCATCCAGACACGTGTTCACAGTACTACGTGTGCGAATATGGAGTGCCGATCGTCTTCGACTGCCCGGCCGGGCTGGAGTTCGATTCGAAGTTGATGGAATGCGTCTGGCCGCACGACTCCGACTGCAACACGGTAGATGGCGGTGATTTGCCAGATGGCCCTGGATCCCAAGATGGCGCTTGCCAGAGTGGCGCTCTGTCGGCCCACGAGGACTGCAGCAAATATAACATCTGCGACCATGGGGCACTGGTTGCTAAGGACTGCCCCTCGGGACTGCAGTGGAGCTCTAAGGTTGAGGTATTTTATCTATTCTTCTTGAAGCAATGCGTCTGGCCGCACGAATCCGACTGCAACACGAAAGATGACGCTGAGCCGCAAGATGGTGCCGATTCTCAAGATGGCGCCGGATCGCAAGATGGCGCTTGTCAGAGTGGCGCTCTGTCGACCCACGAGGACTGCAGCAAATATAACATCTGCGACCACGGGGCGCTGGTTGTTAAGGACTGCCCCTCGGGACTGCAGTGGAGCTCTAAGGTTGAGCAATGCGTCTGGCCGCACGAGTCCGACTGCAACACGAAAGATGACGCTGAGCCGCAAGATGGTGCCGATTCTCAAGATGGCGCCGGATCGCAAGATGGCGCTTGCCAGAGTGGCGCTTTGTCTGCCCACGAGGACTGCAGCAAATATAACATCTGCGACCACGGGGCGCTGGTTGCTAAAGACTGCCCCTCGGGACTGCAGTGGAGCTCTAAGGTTGAGCAATGCGTCTGGCCGCACGAGTCCGACTGCAACACGAAAGATGACGCTGAGCCGCAAGTTGGTGCCGATTCTCAAGATGGCGCCGGATCGCAAGATGGCGCTTGCCAGAGTGGCGCTCTGTCAGCCCACGAGGACTGTGGCAAATACAACATTTGTGACCATGGCGCGCTGGTAGCTAAGGACTGCTTCCCTGGACTACATTGGAATTCAAAAGCACAGGTTTGTGACTGGCCTTCGGCTGCTGGCTGTGTTTAA
- Protein Sequence
- MCHTLMEALPLLALCSLAAATQCPPPDSVRFLIPHETDCSKFYICSHGTPVLQNCPDGTHFNPNFMVCQNPVFAGCSTELPEAELPCDWPSSVLFRPHPDTCSQYYVCEYGVPIVFDCPAGLEFDSKLMECVWPHDSDCNTVDGGDLPDGPGSQDGACQSGALSAHEDCSKYNICDHGALVAKDCPSGLQWSSKVEVFYLFFLKQCVWPHESDCNTKDDAEPQDGADSQDGAGSQDGACQSGALSTHEDCSKYNICDHGALVVKDCPSGLQWSSKVEQCVWPHESDCNTKDDAEPQDGADSQDGAGSQDGACQSGALSAHEDCSKYNICDHGALVAKDCPSGLQWSSKVEQCVWPHESDCNTKDDAEPQVGADSQDGAGSQDGACQSGALSAHEDCGKYNICDHGALVAKDCFPGLHWNSKAQVCDWPSAAGCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -