Ahol022909.1
Basic Information
- Insect
- Acleris holmiana
- Gene Symbol
- ZFY
- Assembly
- GCA_949316455.1
- Location
- OX438773.1:4576458-4594075[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 6.6 7.7e+02 2.1 0.1 2 23 117 138 116 138 0.94 2 15 0.0075 0.88 11.4 0.1 2 23 142 164 141 164 0.96 3 15 0.015 1.8 10.5 0.1 1 20 432 451 432 453 0.95 4 15 0.041 4.9 9.1 1.2 3 23 464 484 463 484 0.96 5 15 0.00043 0.05 15.3 3.4 1 23 532 555 532 555 0.94 6 15 2.1 2.4e+02 3.7 0.2 3 14 633 644 632 654 0.80 7 15 4.5e-05 0.0053 18.4 1.8 1 23 688 710 688 710 0.97 8 15 3.1e-06 0.00036 22.1 0.7 1 23 717 739 717 739 0.98 9 15 0.00011 0.012 17.2 2.3 1 23 744 766 744 766 0.96 10 15 4.4e-05 0.0052 18.4 3.9 1 23 772 794 772 794 0.99 11 15 1.8e-06 0.00021 22.8 1.2 1 23 800 822 800 822 0.98 12 15 0.00068 0.08 14.7 2.6 2 23 829 850 829 850 0.98 13 15 0.00074 0.087 14.6 0.5 2 23 859 881 858 881 0.96 14 15 0.00028 0.033 15.9 0.2 2 23 887 908 886 908 0.96 15 15 0.85 99 4.9 3.3 1 23 914 937 914 937 0.97
Sequence Information
- Coding Sequence
- ATGGCTTCTGATGACTCTGACGATGAACCGTTGAGCGTGATAGCAGCGGCAATGAAGCTGAACCCGGATAAGAATACAAATGTCATCGCGGATACGCCTAAAGATGAACCggctaagaaaaaaaagaagatgGTGAATTCTCGTAAGAAAATGTCTGCAAAGACGATAAAGATTAATAGCACCTTGACGGCGGTGGCTACTCCGACAGTGGTTGAGCGACCCGTGGACGTGTGGCTTTATCTGAAAGATCTGAATCCAACAGGACCCTACAGCTGTTTGCTGTGCTCTGATTGGTTCATTAACAGGTTCAAAATGATTGTACATTACATGTTGAACCATAAGAAGGATTACTGTGGGATATGCAGGTACTTCGTGCCAGATAGAGAAGCATGGTTTGGCCACTTGAAATTCCACACACCCTGGCCCTGCTCCCAATGCGTTGAAAACTTTGAAACAGAAAGAGAGCTCCGGCAACATCTTAGCACAGAACATAACCTAGTCCACTGCAGATTATGCCACTTCCGAGTGGCTGATGATGACCAGTACAACATGCATTTGGTACAAAAACACAGTGTCTCCAGTCTTACCTGTAAAGACGAAGAAACACTATGGGAATTTGAATATGAAGGCAGTAACAAATTCCTCTGCCTACTTTGCTCAAAATCAAATAATGCATGCAACACATTCTTCAATCATTACATGGGATTCCATCATTTTACTCTTAAATGTGTGAGCAGTGTTATCTCAGGACGAGATCTGCCATTTTCTGTTGGTGGGGCCAACATCAGTCCTGCGTTTATTCAGACGCAGTTGAAAGACCAAACCAGGTTTGGGTATGTAGACTTGGAAAATaaccttacaaagtttaaaattaatgagGACGAGCATACTGATAGCGAAACAAGTGATTTGCTTCGTGTACTTATACCTGAAATCAAACAAGAAGCAATGAGTCCGGAAGAAATCCACACCACTGATAAagtcaaagaaaaaaagaatGTAGTCCGAGGTGAAAATGATATCACTAATGTTTATAAAGGAGATGAAGACTTTGATGTCACATTAACAGAGTTAATTATACTACAGAAATGTTATTTTGAATACCTTAATCAGACCTTAAGCAACATCAACTCAAATTTAGTCCCAGAAATTTCTGATATAGACTATGCTTCAGCAAAACCTGATTTACCAACAACAGATATATCATGTTCTCTTTGTAAAAACAAGCATAATAATGTGCAAGCATTTACTTCACACATGATTAAGAATCATTTCATGAAAACGGCACCAATTTACTCATGCAGAGTTTGTGCGACTACATTTGAAAATCAAGCGGATCTTGACAGTCACATGACAGAGGAACTAGGTTATTTTGAAAACCTGTGGCTATGTCAGTTCTGTGACAAGGAATTTGAAAACAGGATGGAAACGAGGCGGCATTTGTCAGATCATTTGGAGGACATGGAGTTTGACAACTGTTTCAGTCCGCATTTgggttttaaatgtaaattttgttCGACCCTGTTTTGGAACGAAACTGACAGAGAAGTCCATCAGGTTCGCGTGCATTTCAACCAGCACAAGGATCAGTTTTATAAATGCGAAGATTGTTCTAAAACATTTAGTGACAAGGTATTCTTCATCCATCACTACATAGAGAAGCATAACACCTACGAAACCCCCACGTACTTGCTCAAATGCATACTGTGCTGCATTGTATGCCCTAGTATCGAGGAGATGCGTACCCACTTCGGGGCTAACCATCCCGAGGCCAAGAAAGTGTTCTGCTCCATGGACACTTGTCAATACCGCCCGCTAAGCCACAGGAAGTCGTTCAAGTTTCATTTGCGGAAAATCCACGATCCGACCGCGCAGCCCCCGCCGAGCTCCGTGGCGTGCACGGTGTGCGGGCGCGACTTCGCCAGCGCGCGGGCCTGCGGCGCCCACGTGGCTCAGGTGCACGGCCCTGCCAAGTTCAAGTGCAAGCTGTGCAGGGATATCCTGTTCACTATGGATGAGAGGAAGCTCCACTACCTGCTGCGGCACCCGGGCCGCCACCCGTTCGAGTGTTCGGAATGCGGCAAGTCCTTCCAGTACAAGTCGTCGCTGTACATGCACAAGCAGGAGCACTCGCCCAACAAGCAGAACTACACTTGCTCGGACTGCGACAAAGTGTTCGCGAAACGGGACTCATTCCGCGAGCACCTGCAAATCCACGAAGGGCCCAAGCACGCGTGCTCGTACTGCCCGATGCGGTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGGCACACGGGCGAGCGGCCCTACACCTGCCCGCACTGCGACCGCACCTTCTCCGACAAGGGCGCCTGCACCGCGCACACCAGAACTCATTCCAAAGAAACTTCCTACGCGTGTGTTTACTGCGGACAGACGTTCGTTCAGAAATCGAAGTTGACATATCACATTCGGAAACACACTGGGGAAAatttGGAGACTTGTACAGTCTGTTCGAAGTTGTTCACAAGTGCTTGCTCGTTGCGTGAGCACATGAAGATACATATCGCGAAGAAAACGGATGGTGTGCCATGCCCGATGTGCAataaGAAGTACCAGGACGAGCGCTACATGCTCCGCCACCTGCGCACGTCGCACACGCGCACGGCGCTGCCCTGCCCGCTGTGCGACAAGACGCTCACCAGCGCGCAGGGGCTGCGCCACCACGTCATCACGCACAGCGCCGTCAATACCTTCCGGTGCAAATGCTGTCCCAAAACCTACGCCGTGATGCGATCTATGGTCAAACATTTAAAGATGCGTCACGGATTGAAAAACactgaaataaatatcaaagatTATTTCAAAAGATTAGATCCCCGAGATTGCAACCTAGATCTCGACGAAGAAGCCATGACGAAAATATTCGGGCCTCCAAAGAAGCCTGTGAATGACGTGCTGATTGGTGATTTTGTTACATTCACTAAAAAGTTGTCCTATGCCGCTAAAGCGCAGAAAGACGGGAATGACGATGATGACGATGACGATGACGATGACGATGGGAATGATGATGAGGTAAATGGGGGCGACGGTAATGACGGAGATCGAAATGATGGAGAAGGAAATGGCGACGAAGGAAATGAACAAGACGGGAGTGACGCTAATGATAGTGATGAAAATTCAAGTGACGGTAATGATACTAATGATAATGGTAATGCTGAAAATCAAAACCGCCGAGGAATAACTGAAGTTATCATAAAAACGGAGACAAAAGACCCCGAAGAATTGGAGCCTACTGATTTTGTGAGTGTTAAGATTGAACCTTTAGACGAGGATGATGAACTGTTAGAAACTTAA
- Protein Sequence
- MASDDSDDEPLSVIAAAMKLNPDKNTNVIADTPKDEPAKKKKKMVNSRKKMSAKTIKINSTLTAVATPTVVERPVDVWLYLKDLNPTGPYSCLLCSDWFINRFKMIVHYMLNHKKDYCGICRYFVPDREAWFGHLKFHTPWPCSQCVENFETERELRQHLSTEHNLVHCRLCHFRVADDDQYNMHLVQKHSVSSLTCKDEETLWEFEYEGSNKFLCLLCSKSNNACNTFFNHYMGFHHFTLKCVSSVISGRDLPFSVGGANISPAFIQTQLKDQTRFGYVDLENNLTKFKINEDEHTDSETSDLLRVLIPEIKQEAMSPEEIHTTDKVKEKKNVVRGENDITNVYKGDEDFDVTLTELIILQKCYFEYLNQTLSNINSNLVPEISDIDYASAKPDLPTTDISCSLCKNKHNNVQAFTSHMIKNHFMKTAPIYSCRVCATTFENQADLDSHMTEELGYFENLWLCQFCDKEFENRMETRRHLSDHLEDMEFDNCFSPHLGFKCKFCSTLFWNETDREVHQVRVHFNQHKDQFYKCEDCSKTFSDKVFFIHHYIEKHNTYETPTYLLKCILCCIVCPSIEEMRTHFGANHPEAKKVFCSMDTCQYRPLSHRKSFKFHLRKIHDPTAQPPPSSVACTVCGRDFASARACGAHVAQVHGPAKFKCKLCRDILFTMDERKLHYLLRHPGRHPFECSECGKSFQYKSSLYMHKQEHSPNKQNYTCSDCDKVFAKRDSFREHLQIHEGPKHACSYCPMRFVQRSNMLRHERRHTGERPYTCPHCDRTFSDKGACTAHTRTHSKETSYACVYCGQTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKIHIAKKTDGVPCPMCNKKYQDERYMLRHLRTSHTRTALPCPLCDKTLTSAQGLRHHVITHSAVNTFRCKCCPKTYAVMRSMVKHLKMRHGLKNTEINIKDYFKRLDPRDCNLDLDEEAMTKIFGPPKKPVNDVLIGDFVTFTKKLSYAAKAQKDGNDDDDDDDDDDDGNDDEVNGGDGNDGDRNDGEGNGDEGNEQDGSDANDSDENSSDGNDTNDNGNAENQNRRGITEVIIKTETKDPEELEPTDFVSVKIEPLDEDDELLET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -