Basic Information

Insect: Acleris holmiana
Gene Symbol: -
Assembly: GCA_949316455.1
Location: OX438789.1:360840-376303[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0015 0.18 13.6 2.4 3 23 353 373 352 373 0.98

2 14 7.4e-05 0.0087 17.7 1.6 1 23 379 401 379 401 0.96

3 14 0.11 13 7.7 1.9 1 23 407 429 407 429 0.97

4 14 0.012 1.4 10.8 6.9 1 23 435 457 435 458 0.94

5 14 0.93 1.1e+02 4.8 0.3 1 11 463 473 463 476 0.91

6 14 5e-05 0.0059 18.3 0.3 1 23 789 811 789 811 0.98

7 14 0.82 96 5.0 0.6 1 12 817 828 817 832 0.89

8 14 0.0023 0.28 13.0 2.3 1 23 837 859 837 859 0.95

9 14 1.2e-05 0.0014 20.2 0.5 1 23 865 887 865 887 0.98

10 14 6.2e-06 0.00073 21.1 0.1 3 23 910 930 908 930 0.96

11 14 2.3e-06 0.00027 22.5 1.2 1 23 936 958 936 958 0.98

12 14 1.4e-06 0.00016 23.1 1.9 1 23 964 986 964 986 0.96

13 14 0.39 45 6.0 1.3 1 23 992 1014 992 1014 0.97

14 14 0.00033 0.039 15.7 4.6 1 23 1382 1404 1382 1404 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0015	0.18	13.6	2.4	3	23	353	373	352	373	0.98
2	14	7.4e-05	0.0087	17.7	1.6	1	23	379	401	379	401	0.96
3	14	0.11	13	7.7	1.9	1	23	407	429	407	429	0.97
4	14	0.012	1.4	10.8	6.9	1	23	435	457	435	458	0.94
5	14	0.93	1.1e+02	4.8	0.3	1	11	463	473	463	476	0.91
6	14	5e-05	0.0059	18.3	0.3	1	23	789	811	789	811	0.98
7	14	0.82	96	5.0	0.6	1	12	817	828	817	832	0.89
8	14	0.0023	0.28	13.0	2.3	1	23	837	859	837	859	0.95
9	14	1.2e-05	0.0014	20.2	0.5	1	23	865	887	865	887	0.98
10	14	6.2e-06	0.00073	21.1	0.1	3	23	910	930	908	930	0.96
11	14	2.3e-06	0.00027	22.5	1.2	1	23	936	958	936	958	0.98
12	14	1.4e-06	0.00016	23.1	1.9	1	23	964	986	964	986	0.96
13	14	0.39	45	6.0	1.3	1	23	992	1014	992	1014	0.97
14	14	0.00033	0.039	15.7	4.6	1	23	1382	1404	1382	1404	0.97

Sequence Information

Coding Sequence: ATGTCTGCTTTGTATATAAACGGCTTGTGGGTGGGGGCTCTGTTCGACGAGGAAAAGAAGGAGCTTAGCCCGGACCAGGCCGAGAGCGAGGCGGCCAGCGATGTGGGGGCTGAGCACGAGGTCAAGCAAGACCCGCTGCCGGGCGAAACCCTAACCGCGGCGCAGACGGCCAGCGATGCAGACGTCGAGCGCGAGATCAAGCAAGAGCCGCCGCTGAGCCCGGACGCGCTGGCCGCGGCGCACGCAGCCAGCAGCATGGGCATCGATCGCGAGATCAAACAAGAGCCACCGGAGGCATTGGGAGCCTCCACCCGCCCACAGTCGGTGGATAAAACAAAACATGGGGTCACTCAAGAGCAAGTGGCAGCCGGCGCTGAGGACGCGCGCCCGGAGAAGACGCCTGCGCAGAGCGGCGCGGCGGACTCGGCGCTCAGGCCCTGCGCGGTCAAGCTAGAGCGCGTTTCCATTGAGGAGCTCCTGTATGGATGCaacatttgtcaaaaaaaaattctcCGAGAAGCCAGTCTAGAAACTCACGTGTGTGCTCAAGAAAAGGCGTTTTGCGATATTAGCGATAGAAAAAAATCACGGCGCCCAGCGTTAACTCAGCAGGTGCCAGTGCACTCTGTAGACAAACCAACACTCTCAAGACTTAATCGGCATAAGTTACTTCAAGGACATGAAGGCAGTTCTCTTCAAGCGGGGAATGAGCTGGACCACAAAAAACCGGTAGGTGGAGAAGAAACCATTGATTTAGCAGACTTTGAATTCGTTAACGTTCGAACTGGAAATCAAGGAGATGGCTCTTTTCTGGCGGAGGATAACTTGGATCTCGTGATTCTGGAACGTGAGGAAGAAAGCTCTGCTCGAGTAGGGTATGAGGCAGATAACGTTGAAATGGATCACATTGAATCGGGAAATGCTCTTACAGAACATGAACTAGATGTCATAGAAGGGGAAAATGAAGTACGTAGTTCTTTGGCAGATAATGACCTAGATCACGTAACACGAGGTGTAAAGGAAAAGAACTCCCAGCCTGACGGCAGGACCAACGCTTGCGACATTTGTTACAAAACTTTTAATGGTCGCCGTCATTTAGTGAAGCATAAGCTAACTCACTCTGGAACGACGTCCCACGCTTGTGATGTGTGTAAGAGAGCGTTTAAGTTACGATCCCGTTTAAAGGCGCATATGCGAGTTCACTCTAGGGAAAAAGTGTACTGCTGCGACATTTgtaaaaacacgtttgttacTCATGGTCGCATAGCTGAACACATGCTGATTCACACGGGGGTAGAACCGCATGCTTGCGAAATATGTAGTAAACGGTTCAGGCTTTGTTCGACTTTTGTTTCTCATATGCGGCTACACCATAGAGAAATTCCATACCATTGCgacatttgtaaaaaaacatatagtgTACTTATGAGTTCTAGTCGAAAGATAGGTCACAAGAGAGTTGTAGGGAATGAATTTAATCACGATACTCAGGAAAACGAAAAAGGTAACAATTTTCAAGTGGTGAATGAGCTGAACCGTTTTGAGATGAGAGAAGGTGAAGGCTCTGCTCTTGTAGAGTATGAGTTAGGTAACGTTGAACATCGGGTCCAAGATAAATCTTTTCTTGTGAATGATGAGCTGGATGATGTTGAACAGGCAGATAAAGAAGAAAGCCTTGTTATTGAAGAACTTGAATATAACTTTTTTCAAGCAGATAATGAACTTAATGACTTAGTAACTGTAGAGAAGGGTCGAGAAGAGCACGAGTTAAATCACATTGAGCATGTAAACCATGAAAATAACTTTTTGCTAGAGGAAAATGAGCTGGATGATATTGAACACGGCGATAAAGAATTAGTTCAAGTACATGAAGGCAGTTCTTTTCAAGCTGGGAATAAGCTAGACCACAAAAAGCCGGTAGGTGGAGAGGAAACTATTGATTTAGTTGACGTTGAAAAGGGAAATCAAGAAAATAGCCCTTTTCAAGCGGAGGTTAAGTTGGATCTCATGATTCTGGAACGTGAAGAAGAGAGCTCTGCACTAGTGGAGTTTGAGGCAGATAACGTTAAAGTGGATCACATTGAATGGGGAAATAAAGACGACAGTTCTGCTCTTACAGAACATGAACTAGTTAACATAGAAAGAGGAAATGAAGAACGTAGTTCTATTTCATCAGCAGAACTGGATCACGTAAAACTAGGTTATAAGGAAGACAACTCCTTGCCTGACGGCAGAGCCAACGTTTGTTCGCAGCATATTCGAGTTAACTTAAAAGAAAAGCCTCACTCCCGCGATATTGGCCCGAAAGCGTTTAAGAAACGCCAATATATGATGAAGCATAGGATTCATTCCGAAGTGAAACCCTACGCATGTGATAACTGTCAGAAGGCGTATACGCAACCAGCACAGTTGAACTATCATAAACGGATTCATTGCGGAGTTAAACCCTACGCTTGTGATACTTGTAAGAAAGCGTTTACGCATATGCGGATTCACGCGGAAAAAACGTACTTCTGCGAAATCTGTCAGAAAGCGTTTCAGAAAAGCCGTCACCTGACCGAGCATAAGGTGGTTCACACCAGCGCGAAAGACTACGTTTGTGATGTGTGTAAAAAAGGTTTTGGATTCCGGTCAAGTTTATTGCGACATATGCAAATTCACGGGCTGGATAACTTAGAACTAGGATTTAAAGAAGATAACTCCCAGCCTGACAGCAGACCTCTCGCTTGCGATATTTGCAAGAAAGAATTTAAAAACCGCTCAGCATTAATTGTCCATATGTTGGTTCATTCTGGGCAAAAACGATACTCCTGCGATATCTGTCAGAAAGCGTTCAGACGACAAGAAAATTTGAGTTCTCATAAGTTGACTCACTCTGCAGTGAAACCTCACGCTTGTGATGTGTGTAAGAAATCGTTTATTCGCCGTTCACAATTAACGGCGCATATGTTAAAACACTCTGTGGAAAAACCGTACTCCTGCGACGtttgtaagaaaacattattaactCATGGTCACATAGCTGAACACATGCTGATTCATGATCTTCAAAAGGTGTATGATACGGGAGATCTAGAGCAAAAATTAAATCATGATAAACAGGTAAACCAAGAAGGTAACAATATTCAAGCGGTCAATATACTGGACAGTTTTAAACGGAGAAGTGATAAAAGCTCTGTACTTGTAGAGTATGATTTAAAACACGTTCAACTCGAAATTGAAAAAGATAGTTCTTCGCTTTTGAACAATAAGCTAAATGGCATTGAACAGGCAAATAACGAAAGCACTGTTATTGCAGAATTTGAATTATATTACGTTGAACAGGAAAACCTCGAAAATAACTTTCAAGTGGAGAATGAACTGGATTACTTTATCCGAGAAAATGAAATCTCAGCTATAGAGGAGCGTGAGGTTAATCACATTCAACTTAGTAACCAAGAAAACAACTCTTTGCTACCGGATAAAGAGCTAGGTGACATTGAACAGGGACATGGACAAGGAAACCCAGCTATTGCAGAATTTGAGTTAGATTACGTTGGACACGAAAACCCTGAAGATGGCCATTTTCAAGATGGGAATGGGTTAGATCACATTGAACAGAGAAACGAGGAAGAAAGCTCTGCTCTAATAAATAATACGCTAGGTCACGTTGCTCAGGGATACCAAGAAAATAGCACTGTGCTGGCGGAGCATAAGATAACTAACTTAAGACAGGGAAATGAAGAAGAAAAGCACGCTGAGAACAGAAACCAAGAGAATAGCTTTTTTCATTTGGCGAATGAGCCAGATCTCATTGATCTGGAAAATAAAGAAGTAAAGTATGCTCTTGCAGGGCATCAGTTAAATCACGCTTTTCAAGAAAAGCACGAAGAACAGTCTATTTTAGATAAGAATAGGCTGGATTACGTTGTAAAGGGTAATGAAGATAGTTCTGCTGTAGCAAACTGTGATCTAGAGTGCaaaaaagggaaaaataaaGATAGTTCATCAGTAAAGAATACGCTGGATCAAGTCgtgcaagaaaataaaaaagataactcTCAGCCTGACGGCACACTTCGTGCTGGCAATAAGTTCAACAAAGCGACTAAAACACGGACACATTTAGATGAGCATAAACTGATACAGTCTGTTACGAAACCCCACACTTGCGATGTGTGTAATAAAGGTTTTAAGACGCGCACATGTTTAACTCAGCATTTGCTCGTCCACTCTGGGCTTCCGAAGAATGCGCTGGGTGACGTTGAACGAGGAagtgaagaagtaaatacccaGCCTGACGGCGAACCGCTCGCCGGCAAACTTTACTGTGCTGCGAGCTCATCCCTGCGACGTCTGTAA
Protein Sequence: MSALYINGLWVGALFDEEKKELSPDQAESEAASDVGAEHEVKQDPLPGETLTAAQTASDADVEREIKQEPPLSPDALAAAHAASSMGIDREIKQEPPEALGASTRPQSVDKTKHGVTQEQVAAGAEDARPEKTPAQSGAADSALRPCAVKLERVSIEELLYGCNICQKKILREASLETHVCAQEKAFCDISDRKKSRRPALTQQVPVHSVDKPTLSRLNRHKLLQGHEGSSLQAGNELDHKKPVGGEETIDLADFEFVNVRTGNQGDGSFLAEDNLDLVILEREEESSARVGYEADNVEMDHIESGNALTEHELDVIEGENEVRSSLADNDLDHVTRGVKEKNSQPDGRTNACDICYKTFNGRRHLVKHKLTHSGTTSHACDVCKRAFKLRSRLKAHMRVHSREKVYCCDICKNTFVTHGRIAEHMLIHTGVEPHACEICSKRFRLCSTFVSHMRLHHREIPYHCDICKKTYSVLMSSSRKIGHKRVVGNEFNHDTQENEKGNNFQVVNELNRFEMREGEGSALVEYELGNVEHRVQDKSFLVNDELDDVEQADKEESLVIEELEYNFFQADNELNDLVTVEKGREEHELNHIEHVNHENNFLLEENELDDIEHGDKELVQVHEGSSFQAGNKLDHKKPVGGEETIDLVDVEKGNQENSPFQAEVKLDLMILEREEESSALVEFEADNVKVDHIEWGNKDDSSALTEHELVNIERGNEERSSISSAELDHVKLGYKEDNSLPDGRANVCSQHIRVNLKEKPHSRDIGPKAFKKRQYMMKHRIHSEVKPYACDNCQKAYTQPAQLNYHKRIHCGVKPYACDTCKKAFTHMRIHAEKTYFCEICQKAFQKSRHLTEHKVVHTSAKDYVCDVCKKGFGFRSSLLRHMQIHGLDNLELGFKEDNSQPDSRPLACDICKKEFKNRSALIVHMLVHSGQKRYSCDICQKAFRRQENLSSHKLTHSAVKPHACDVCKKSFIRRSQLTAHMLKHSVEKPYSCDVCKKTLLTHGHIAEHMLIHDLQKVYDTGDLEQKLNHDKQVNQEGNNIQAVNILDSFKRRSDKSSVLVEYDLKHVQLEIEKDSSSLLNNKLNGIEQANNESTVIAEFELYYVEQENLENNFQVENELDYFIRENEISAIEEREVNHIQLSNQENNSLLPDKELGDIEQGHGQGNPAIAEFELDYVGHENPEDGHFQDGNGLDHIEQRNEEESSALINNTLGHVAQGYQENSTVLAEHKITNLRQGNEEEKHAENRNQENSFFHLANEPDLIDLENKEVKYALAGHQLNHAFQEKHEEQSILDKNRLDYVVKGNEDSSAVANCDLECKKGKNKDSSSVKNTLDQVVQENKKDNSQPDGTLRAGNKFNKATKTRTHLDEHKLIQSVTKPHTCDVCNKGFKTRTCLTQHLLVHSGLPKNALGDVERGSEEVNTQPDGEPLAGKLYCAASSSLRRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -