Ahol018397.1
Basic Information
- Insect
- Acleris holmiana
- Gene Symbol
- cdc5l
- Assembly
- GCA_949316455.1
- Location
- OX438769.1:6509315-6521765[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-17 5.6e-14 53.2 1.8 2 46 9 54 8 54 0.97 2 2 3.4e-12 6.5e-09 37.0 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAATTATGATAAAAGGCGGCGTTTGGCGCAACACTgagGATGAAATCCTGAAGGCGGCTGTGATGAAATATGGCAAAAACCAGTGGTCTCGTATTGCTTCTTTGCTGCACCGCAAGTCTGCGAAACAGTGCAAGGCTCGTTGGTACGAGTGGTTGGACCCGAGCATCAAGAAGACAGAATGGTCGCGCGAGGAGGACGAGAAGCTGCTGCACCTGGCCAAGCTGATGCCTACACAGTGGAGGACAATTGCTCCCATTATCGGGCGCACAGCCGCTCAATGCTTGGAAAGATATGAATATTTACTggATCAAGCTCAGAAGAAAGAGGAGGGGGAGGATATGGGTGATGACCCTCGCAAGTTGAAACCGGGCGAGATTGACCCTAATCCTGAGACTAAACCAGCCAGGCCCGACCCTAAAGACATGGATGAAGATGAACTAGAGATGCTGTCAGAAGCTCGTGCCCGCCTGGCGAACACCCAGGGCAAGAAGGCGAAGAGGAAAGCACGAGAGAAGCAGCTAGAGGAGGCCCGGAGGCTCGCAGCACTGCAGAAGCGCCGGGAACTCAGTGCAGCCGGCATCGCCGTGCCCATGAGGCGCAAGAAGAAGCGCGGTGTGGACTACAACTCTGAGATTCCGTTCGAGAAGCGGCCAGCAGCTGGTTTCTACGACACGTCCGTTGAGGTCGTTGACCCCATGGCGCCGGATTTCTCGCGCTTGCGCCAGCAACACCTTGATGGGGAGTTACATTCCGAGAAGGAGGAGAGGGACAGGCGCAAAGACAAGCAAAAGCTGAAGCAGCGCAAAGAGAACGATGTGCCTCAGGCAATGCTACAGGGCGACCAACCCGCGCGCAAGCGCAGTAAACTCGTGCTTCCCGAGCCGCAAGTCACCGACCAGGAGCTGCAGCAAGTGGTGAAGCTCGGGCGCGCGTCGGAGGCGGCGCGCGAGTCAGCGGGCGAGGCCGGCGCCGCCACGGACGCGCTGCTGGCCGACTACGCGCTCGCGCCCGTCACGCCCGCCGCGCTGCGCACGCCGCAGCAGCACCAGGACAGGATCCTAATGGAGGCGCAGAACGTGATGGCGCTGACGCACGTGGACACGCCGCTGAAGGGCGGGCTCAACACGCCGCTGCACCCGAGCGACTTCTCCGGCTCGTTGCCGCAGGCGCCCGCCGTTGCCACGCCCAACACCGTGCTCGCCACGCCATTCAGGTCTTCCCGCAGCGAGGTGTCCACACCAGGAAGCTTTGCAACCCCGGGACGCGGGCCCACGCCATCTGGACTAGTCACTCCAGGCCTGCGCGACAAGTTGAGTATCAACCCTGAAGATCAAATTGGAGCCGGTGACACGCCGCAGCAAGCAAACCAGCTGCAGAAACAGCTGAAGTCGTCGGTGGTGCGCGCGCTGGCGGGCCTGCCGGCGCCGCGCAACGACTACGAGATCGTGGTGCCGCTCGCCGACGCCGAgcccgccgcgcgcgcgcccgccgcgcccgccgccgagGACCAGGCCGACGCCGacgcgcgccgcgcccgggaCAGGGAGGACGAGCGTGAGCTTACACTACTACTACACACTACACACGCATTAttataa
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPMRRKKKRGVDYNSEIPFEKRPAAGFYDTSVEVVDPMAPDFSRLRQQHLDGELHSEKEERDRRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVTDQELQQVVKLGRASEAARESAGEAGAATDALLADYALAPVTPAALRTPQQHQDRILMEAQNVMALTHVDTPLKGGLNTPLHPSDFSGSLPQAPAVATPNTVLATPFRSSRSEVSTPGSFATPGRGPTPSGLVTPGLRDKLSINPEDQIGAGDTPQQANQLQKQLKSSVVRALAGLPAPRNDYEIVVPLADAEPAARAPAAPAAEDQADADARRARDREDERELTLLLHTTHALL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01084203;
- 90% Identity
- iTF_00148421; iTF_00871244; iTF_01178513; iTF_00405853; iTF_00779452;
- 80% Identity
- -