Ahol022096.1
Basic Information
- Insect
- Acleris holmiana
- Gene Symbol
- -
- Assembly
- GCA_949316455.1
- Location
- OX438772.1:11595361-11595810[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-12 1.1e-09 39.1 0.0 1 37 16 52 16 60 0.88
Sequence Information
- Coding Sequence
- ATGGAGGTCGACactaatcgaaaaaaatacgtAAGATTCGGTTACACTCAAGAAAACTTAGAAAAGGCTATAGATGAAGTAGTAAGaggaaaaatatctttaaatgcaGCAAGTGTCAAATACAATGTGCCTAAGTCTACActgcataataaaattaatttcaaggTTCCTCTTGGACGACAAACGGGACCAAGCCCTGAGCTGACTCGTGAAGAGGAACAAAAGTTGTGTGATTGGATAATACAGAAATCAATGCTTGGTTTCCTGATGCACCCAGATGAAGTTTTTGATACCATACAAAGTTTTATGAATGAGACAAAGAGAGACTCTAAATTTAAAGATAACAGACCAGGAAGGAAATGGCTAGCGTTGTTTTTAAAAAGACATCCGGTACTTATAAAGCGAAATGCAGAAATGATATCGAAATCAAGCGGCAGTGAAAGAAGGTGA
- Protein Sequence
- MEVDTNRKKYVRFGYTQENLEKAIDEVVRGKISLNAASVKYNVPKSTLHNKINFKVPLGRQTGPSPELTREEEQKLCDWIIQKSMLGFLMHPDEVFDTIQSFMNETKRDSKFKDNRPGRKWLALFLKRHPVLIKRNAEMISKSSGSERR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00008832;
- 90% Identity
- iTF_00008832;
- 80% Identity
- -