Basic Information

Insect: Achroia grisella
Gene Symbol: -
Assembly: GCA_030625045.1
Location: JAULSB010000240.1:1723168-1730723[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.1 1.5e+02 3.7 0.4 1 23 54 77 54 77 0.95

2 20 0.014 1 10.6 3.1 1 23 84 107 84 107 0.97

3 20 0.0025 0.18 12.9 0.4 2 23 223 244 222 244 0.97

4 20 3.4 2.5e+02 3.1 1.7 1 23 250 272 250 273 0.94

5 20 0.21 15 6.9 3.4 2 22 515 535 514 535 0.95

6 20 8.2 6e+02 1.9 1.2 1 23 634 656 634 656 0.79

7 20 0.62 46 5.4 0.3 2 23 792 813 791 813 0.96

8 20 0.12 9.1 7.6 0.7 3 23 889 909 887 909 0.96

9 20 0.044 3.2 9.0 0.7 1 23 917 939 917 939 0.97

10 20 7.1 5.2e+02 2.1 2.4 1 23 974 996 974 996 0.92

11 20 0.00078 0.057 14.5 4.6 1 23 1004 1026 1004 1026 0.99

12 20 0.54 40 5.6 2.0 1 23 1111 1133 1111 1133 0.98

13 20 0.033 2.5 9.4 2.0 1 23 1188 1210 1188 1210 0.97

14 20 0.13 9.3 7.6 0.1 3 23 1218 1238 1217 1238 0.96

15 20 0.0042 0.31 12.2 0.6 1 23 1300 1322 1300 1322 0.94

16 20 0.028 2.1 9.6 0.6 1 19 1328 1346 1328 1347 0.97

17 20 0.0079 0.58 11.4 2.6 1 23 1440 1462 1440 1462 0.97

18 20 0.0002 0.015 16.4 1.4 1 23 1468 1490 1468 1490 0.99

19 20 0.37 27 6.1 2.1 1 23 1581 1603 1581 1603 0.96

20 20 0.0033 0.24 12.6 3.7 1 23 1614 1636 1614 1636 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.1	1.5e+02	3.7	0.4	1	23	54	77	54	77	0.95
2	20	0.014	1	10.6	3.1	1	23	84	107	84	107	0.97
3	20	0.0025	0.18	12.9	0.4	2	23	223	244	222	244	0.97
4	20	3.4	2.5e+02	3.1	1.7	1	23	250	272	250	273	0.94
5	20	0.21	15	6.9	3.4	2	22	515	535	514	535	0.95
6	20	8.2	6e+02	1.9	1.2	1	23	634	656	634	656	0.79
7	20	0.62	46	5.4	0.3	2	23	792	813	791	813	0.96
8	20	0.12	9.1	7.6	0.7	3	23	889	909	887	909	0.96
9	20	0.044	3.2	9.0	0.7	1	23	917	939	917	939	0.97
10	20	7.1	5.2e+02	2.1	2.4	1	23	974	996	974	996	0.92
11	20	0.00078	0.057	14.5	4.6	1	23	1004	1026	1004	1026	0.99
12	20	0.54	40	5.6	2.0	1	23	1111	1133	1111	1133	0.98
13	20	0.033	2.5	9.4	2.0	1	23	1188	1210	1188	1210	0.97
14	20	0.13	9.3	7.6	0.1	3	23	1218	1238	1217	1238	0.96
15	20	0.0042	0.31	12.2	0.6	1	23	1300	1322	1300	1322	0.94
16	20	0.028	2.1	9.6	0.6	1	19	1328	1346	1328	1347	0.97
17	20	0.0079	0.58	11.4	2.6	1	23	1440	1462	1440	1462	0.97
18	20	0.0002	0.015	16.4	1.4	1	23	1468	1490	1468	1490	0.99
19	20	0.37	27	6.1	2.1	1	23	1581	1603	1581	1603	0.96
20	20	0.0033	0.24	12.6	3.7	1	23	1614	1636	1614	1636	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGTCGGCGAGGTCGCGTCTCTTGTGCGCCCCTTTGAAGGTCGCTTGAACGGCGACGTCTCGTCAGAGGCCTCTTCGGACGCTGCGGAAGAATCGGAGCTGCCGCAGTGTAAAATAAGGAGAAATTACAATTGCGCCAAGTGCAAATTTTATACTCAGAATCCACGAGCGTATCTAGTGCATATACGTGACGTTCACTTTgaaaaatttagaatatacGACTGTCCACATTGTGTTTACGCTTCTAGGCATCAGCAGAAACTTTCGAGACATTTGAAAATGGTGCATGTAGCTCCTACTTCGCTTACCAACGGCAAGGTGGATATAGAGATACCACCCCCACCACCACCAATTTCAGACACAACTGAGCCTTCAGAACGAATTGAAGATTTGCTTGAAGAAGTAGAAGAGTGTGAAGATGTAGAAATGGAGGGAGAGGATGGCAATGACGAGTCACTGTGCCGTTCCGCAGACATCGACGGCGGAGTTGATAGATCGATGTCGAATGACATAAATCAATTGAATGCAACAAAAAGCAAGAGTAAATATTTCTCGTGCGTTAAGTGTAACTATGTTACGCACATCAGGGCCAGATTTACTAAGCACGTCAAATATCATTCAATGCCTATGATTAAGTGTGCCATATGTGATTTTCGTACCCCATATAAATGGAATCTGGATCGCCACATGAAAAATCACGGAGGTAATGGTAGCTTCACCTGCTACATGTGCAACTTCACAGCGGACATTAAGCAAAGTCTGACAGTACATGAGATGAATCACCACACTCCGCCAGTGGGTCAATCGTTAATAATTCGCCGCCGCAATCGGGTGGGTGCCAGCGACGTGCCATTTGAAGACGACGTAACAGCGTTTATCACCAAGGAGGAAGAAGGGAGTGGCGACTCACGCTCCTCACACTCGACCTCGgAATTATTGCAGTACGCAGAGAGAGAAATGATAAGTTGTAATAGCGACTCAAATGATACTGATATGACAGTCAAAAGAGACGATCAACACTCTCCACAAGATATACAGAATGAATTATCACCTAATGCAGACATGGATGATGCCAAATATCAAAAACAGAGCAGAAAAATTTCCAGACCAATTCCTCAATTAATACCATTAAACGCATCTACTCCAAATCAGGGCAAAACGTGCAGTGGTGAACCACCTGCAAAGAAGTTTAAAGAATCGAATTTAACAGAATCAAATGATAGTAATAGCAGCAAATTTGAAAATCTACCGGCGGATGTCACATTAATACCTGTGTCTAATATGCCAACAGGTACCAAGGATACATTAGTGCGTAAAAAAAATGAATCCTTCTTTGACAAATTAAAGGAAAGATTACTCACTGAAACCGGTGAAGAAGGGTCacttatatgtaaaaattgCGGTTTTGAAAGCAAATGTTTATCTGAACATTCAGTACATGAGAAAAATTGCTCTTCACAATTAAACCGCATTGCACCAAATACTTTACATTCAACTTTGGGCTCAACGCGATGTCAAAACTGCAGACATAGATGCAAATCTAGTGCAGAtctttatgttcatatgcaaaCGTGCAGAAAAAATCAAACGAGAGATGACGAACAATGTatagaactaaaaaaaaaagaaaacaatgaaACTACAATATCTGTGCAAGAAAGAGACGCTGAACGACATCCAATGGAAAATGTAGTGTTTGTTTGGAATAACATTAATCATGATCCTAACAAGTTTGAGACACCACTTGGTATTAACATCAATGACGATTCAACACTCCCAGAACTACACAGAAATTACGAAGCTGAAATTGTAGACGATAATGAAAGTATGAACTTGTCGCCAAGTCAAGCTATAggcaaaaaagtatttaaatgtcCACACTGTGAATTTTGGGCTTCAACTGCATCTAGATTTCATGTTCATATTGTAGGACATTTAAATAAGAAGCCTTTTGAATGTTCTTTGTGCAAATACAAGTCAAATTGGAGATGGGATATTACTAAACATATCAAATTAAAGTCGGCTAGAGATCCTGAGCATAATGAAGCAAAAGTGCTTATGACTGATGAAACAGGTCGAAGAAACtatagcaaatataataaatttttagcAATGTCAATTCTGAACGAAAATGGTGAGAACAAATTTCATTACATTGATCAAAATGCTTTAACAGATCCATCAATGGAGGTAGATGAAACCTTGAATGACTTAACTGAAAATATGAATGGATCAATACCATTAGACATGCAGCCACTTAATTTACAGACACAACACGGAGATCAGAAATCCAATGATGGCAAAATTTCCGATTCCAAGAAACCAAAGAAAACTCTGTGGAAATGTAAAAAATGCAATTATAGGGATCCATCCAAAGAAGCTTTATTAGAACATGTTCGAGAGCATTCAAGAGCGGAAGGCAATACAGACGATTCAAAATTAATGAAGAAACCTGATAATATACCTGATCCAGCAGATCTTGCTTATCGCTGTGGACACTGCAATCAGTTATCAAATTGGAAACATGTTATACAGagGCATTGCCGATTGAAACACGACGGTGTAATAAGAGTCATCACAACGCTAAAACCAAAACCAGATATTTCAGCAAATGAAGGCTCTATTGACATATGCACTAAGTGTCCGTTTAAAAccaatgataaaaaaatgttcgtAGCACATTTACAGCAACATCAGCCTTCTCCGCAGTCTATTTTCAAATGCTACTTTTGCCCTTATTTTGTTAAGGATGAGCAGGAATTAATGCAACATTTACTTCTCCATGGCGTGACCGAACCAGAAGAGTATATATCTAAAGCAATGGGATGTAAGTCCCCATTGCAAGAATTACACGGGACGCCATTAAACCCTAATTCAACAAAACGACACAGATGTATAGAATGTCCTTATGAAACAAACAGCAAATCACAGTTTATGTATCACGAGCAATTTCACAGACTTCCAGCTGACACGCCATATAAATGTCCGCAGTGTAACTACAGCGTTTCCAAAAGGCACTTGCTACATCAACATTTAAGAGTTCATGGTATTCTCACAAAGAAGACAGAATCCGAAGCAGAACTGGAAGCAATGTCAATGAATTCTAGTAGAACAGAAGATAAAGCAGACATACATATACCTCTAGAAGAAATACCTTATGTATGGGTATCGGCAAAAAATATGTTCCATAAAATGTATAAGTGCCGCTATTGTTCATACGTAAATtcacaaaaatgtaaaataccTTATCATGAAAAAattcattgtattatttttgaaaatagtgAAATAACAGTATATAAATGCTTGGAGTGTAAATTTATATGTGATAATCCGAATAAATTAGGCGAACATTCTAAAACACATGGTGAAATATATGGACGCATTTGCTGTCCCGTTGAGTTAGATATACCAGATGAAGAccaaatagaaaaattacaaaagGTAATTGAAGCTGAACAAATAACACCCACAAAAGATTTCATAAAAGAAGACATATCCAATGGTAGTAAGGAGATGAAAATGTTATACTTTTGCCAAAAATGTCCATCCAGATTCTTTGATTATGATGAATTAAACAATCATGAAAAATATCATGTATTAAATTTTCCCAACATATGTAAAAGCTGCGAATATTCTGTCTCCGAAGAAAGCGAGTTAAATTCACATGTTTTAGTTCACACAGATGAATATCACACAAAAACGAAAATGTTAAAGTTTATGTACAATTCGCATGCAGAGCACATGCAGCCTCAACTAAAATTAGTTCATTGTACAGCTACGTCAGAAATAACATGGGTGGTTTCAGATTCCACTGCAGAACATGAAGTGACcaacaataaaaaagttaatgaaTCAAGACAATACTTTTGTAAAGATTGCCCAGCAAAATTTTTCAAAAGTTCTGCACTAAACTATCATATAGGATTACATGGAGGAGACGGTGAACATAAATGCAAAAAATGCAATTACGCTGTTAACAGTTTAGGAAATTTGGCAAAACATGAATGGCTTCATAAGGGGGAAAATAAAATACCAACTTGTGATTACGAGTCTGGTGAAGATATGGATTACAAGAATATTCCATTATCGGGAACAGATTTATTTCAAAGAAAGACTGAGGCCCAGAAAAGAGTTTTAATTGATAAAGATAAATTAGTAAAACCTAATGACCACTTCCCACCCGTACTTCAAGCTGATCCACAATTTGGTTATTTGATGCATGGCAATCCAGAATTTATATATCCCACTTATTTAAAGAATGGTCGCCAAAAAGAAAAACGCTATAAGTGCCACAAATGCCCTTCTGCTTTTGAAAAAAGGgaacaatataaaattcatttatctTTACACGGTTCAAAACAAAGATATAAATGCGAACTCTGCGACTATTCCGTAAAGTATTACGCTAATTACGTTCAGCATATGAGAAAACACCAGATGAATGACGAAGCGCAAGCAGAAAGAAAAAAGGGGAATAATGATTTCAATGAAGGAGGTAGTCACGAAGATAAGCAGGATGACAGTGGTGATAATATTAAGTTAGCCATCAAAACGATGCCAAAAGGAACACCGAAAAGCGATTTTCAGCAGTTTTCAATAAGTGACCAACAAACCCTGCGCCTACTACAGCGAAGACGGTCCATTAATAGCGCTGGAAAAGATCCAAGTTCAAGTGAAACACCACCAACAAAAGATAGAAAGCTCCACATGTGCTTATTATGTCCATATACAAATCAGCGACAAGATGCCTTAACAAATCATTACAGAAGACATGACGATAGTGATATTCTTAACGCAGGGAGTCATAAGTGTTCTTATTGTGACTTAGTTGTAGTTCAGTCACATTTTCTTCGTGAACATCTTAAAACTCATTTTAATTATCAGAAAACATTAACGCCGGAATGCTTTGTTGCTAATGAGGGCGTAACTTTTACCATTACAAAAGTGGATGATGAAAATGTATGTACTGATCTCAAGTTAGACTTAAAAATCAACACTAATATGTGCAATGATgagaaaatatttgtaaaaatcaaAACCGGTGAACTTTTAACTgagtga
Protein Sequence: MLQQMSSPPSAQVGEVASLVRPFEGRLNGDVSSEASSDAAEESELPQCKIRRNYNCAKCKFYTQNPRAYLVHIRDVHFEKFRIYDCPHCVYASRHQQKLSRHLKMVHVAPTSLTNGKVDIEIPPPPPPISDTTEPSERIEDLLEEVEECEDVEMEGEDGNDESLCRSADIDGGVDRSMSNDINQLNATKSKSKYFSCVKCNYVTHIRARFTKHVKYHSMPMIKCAICDFRTPYKWNLDRHMKNHGGNGSFTCYMCNFTADIKQSLTVHEMNHHTPPVGQSLIIRRRNRVGASDVPFEDDVTAFITKEEEGSGDSRSSHSTSELLQYAEREMISCNSDSNDTDMTVKRDDQHSPQDIQNELSPNADMDDAKYQKQSRKISRPIPQLIPLNASTPNQGKTCSGEPPAKKFKESNLTESNDSNSSKFENLPADVTLIPVSNMPTGTKDTLVRKKNESFFDKLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCSSQLNRIAPNTLHSTLGSTRCQNCRHRCKSSADLYVHMQTCRKNQTRDDEQCIELKKKENNETTISVQERDAERHPMENVVFVWNNINHDPNKFETPLGININDDSTLPELHRNYEAEIVDDNESMNLSPSQAIGKKVFKCPHCEFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMSILNENGENKFHYIDQNALTDPSMEVDETLNDLTENMNGSIPLDMQPLNLQTQHGDQKSNDGKISDSKKPKKTLWKCKKCNYRDPSKEALLEHVREHSRAEGNTDDSKLMKKPDNIPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIRVITTLKPKPDISANEGSIDICTKCPFKTNDKKMFVAHLQQHQPSPQSIFKCYFCPYFVKDEQELMQHLLLHGVTEPEEYISKAMGCKSPLQELHGTPLNPNSTKRHRCIECPYETNSKSQFMYHEQFHRLPADTPYKCPQCNYSVSKRHLLHQHLRVHGILTKKTESEAELEAMSMNSSRTEDKADIHIPLEEIPYVWVSAKNMFHKMYKCRYCSYVNSQKCKIPYHEKIHCIIFENSEITVYKCLECKFICDNPNKLGEHSKTHGEIYGRICCPVELDIPDEDQIEKLQKVIEAEQITPTKDFIKEDISNGSKEMKMLYFCQKCPSRFFDYDELNNHEKYHVLNFPNICKSCEYSVSEESELNSHVLVHTDEYHTKTKMLKFMYNSHAEHMQPQLKLVHCTATSEITWVVSDSTAEHEVTNNKKVNESRQYFCKDCPAKFFKSSALNYHIGLHGGDGEHKCKKCNYAVNSLGNLAKHEWLHKGENKIPTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNDFNEGGSHEDKQDDSGDNIKLAIKTMPKGTPKSDFQQFSISDQQTLRLLQRRRSINSAGKDPSSSETPPTKDRKLHMCLLCPYTNQRQDALTNHYRRHDDSDILNAGSHKCSYCDLVVVQSHFLREHLKTHFNYQKTLTPECFVANEGVTFTITKVDDENVCTDLKLDLKINTNMCNDEKIFVKIKTGELLTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -