Basic Information

Insect: Achroia grisella
Gene Symbol: ham
Assembly: GCA_030625045.1
Location: JAULSB010000130.1:1066001-1110981[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.24 17 6.7 0.1 2 23 396 418 396 418 0.91

2 9 0.001 0.076 14.2 0.6 1 23 425 448 425 448 0.93

3 9 2.6e-08 1.9e-06 28.6 0.1 1 23 454 477 454 477 0.96

4 9 2.3e-06 0.00017 22.5 1.7 1 23 483 505 483 505 0.95

5 9 8e-05 0.0059 17.6 6.1 1 23 511 533 511 533 0.99

6 9 0.00016 0.012 16.7 0.4 2 21 541 560 540 561 0.94

7 9 1.9e-08 1.4e-06 29.0 0.7 1 23 947 969 947 969 0.98

8 9 6.9e-07 5.1e-05 24.1 1.7 1 23 975 998 975 998 0.97

9 9 5.7e-06 0.00042 21.3 3.4 1 23 1004 1026 1004 1026 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.24	17	6.7	0.1	2	23	396	418	396	418	0.91
2	9	0.001	0.076	14.2	0.6	1	23	425	448	425	448	0.93
3	9	2.6e-08	1.9e-06	28.6	0.1	1	23	454	477	454	477	0.96
4	9	2.3e-06	0.00017	22.5	1.7	1	23	483	505	483	505	0.95
5	9	8e-05	0.0059	17.6	6.1	1	23	511	533	511	533	0.99
6	9	0.00016	0.012	16.7	0.4	2	21	541	560	540	561	0.94
7	9	1.9e-08	1.4e-06	29.0	0.7	1	23	947	969	947	969	0.98
8	9	6.9e-07	5.1e-05	24.1	1.7	1	23	975	998	975	998	0.97
9	9	5.7e-06	0.00042	21.3	3.4	1	23	1004	1026	1004	1026	0.99

Sequence Information

Coding Sequence: ATGTTACAATACCGTCGTATGCTGAACTTTGATGCAAGCCCAAAAATGAAGATATCCGCGAAGCAGGTGAATCCGCATAGCAACCCAAATGCAATACTCACCAAACTTCATTCAATAAAGGCTTCCTTTGCGTTCACGCGCATCCTGGATAGTGAATGGAAGGATCGTAAAGTTCATAACCACAACGAAAAACAAGACTACCAATCTAAAGGACAAAATATTGGGGTTGGACAAAGTAAAAAAGTAATCAAAGATGCTGGATTTGCATACAGCAGGGATGCTCTGAGAGACAAGCGGAAACCTTTTGTGGTTAGCGGAAACAGACATAATGCGATCAGCATCTTGCACTCGTCTTCTGTTTTTATCGTATTATTAAGTGCTACCTCTAGGGATGGTTTCTGGCCAGATTTCTTGATACGAACTgtTGTAATTTTTTCTTCCACAGCAGCAGACAGCCAGGAATCTGGGAGCCCACCGCCGAGCCCGACGGATTCCGTCGGGTCGGAATCCGCTCCTACTCTAGTCCACATCAAGCAGGAAAATATGCCGCCGGGAGCAGATGTGAAAGAATACTACGGCGGTCTAGACTTCACACTTTCTGACACATATCTGTCACCAAATTACGCTGAATACGGCGCTGGCTATTTATCCAGACCAATCGATTTACAAAACCAGAAATTTCTGGATCCAGATAAAAGTTCCAAAGACAAAGACGAAGCGATAAAAGACGACGAGCCAGAGGAGACCTCTAATTTCAATATTCCAAATGAACTAACATTGAAAAATGGTGGCATCTTCGCTAGATCGAATATTTTAGTTGGAACTAAGTACGGACCATTTATGGGCAAGTGGGGGACGCAGCCGTTGGAGTCAAAGTACGCTTGGGAGttcCTCGGCAAGAACGGTATTAGAGGATGGTTGGACGGCACCACAGAGAAGTCCAACTGGTTGAAGTACATCCGCTCCACCAGTTACACGCACGATGCCAATGTACAGCACACACTGCACGCTGGTGAAGTATGGTATAAAGTAATACGTGATATTACTCCTGGTCAGGAGTTGCTGCTGGGTCCGAGGACACCGTTACCGCTGCAAGATATCCTTCCCACTACTGATCACCAGAGCTCTAGTGTCAAGTATACGCAGCCACTTCCTGAAGAGGAGGAACGTGAAGATACGGAGCCGAGGTGCTCCTTCTGTGACTCTCCATTCCCTAACATAGACACacTCGACCGTCACTTAGTGCAGGCACATGCCCAGCCGTCAGCAGCATTTCACTGCGAACTGTGCAACCGCGCCTACAGCTCCCGTGCGCTACTGTTACGGCATAGAGCGCTTGCGCACACTGATATCCGAAAATATCCTTGCGAGAATTGTCCTAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATCCGCGCGCAGCACGTGGGCGCACGCAGCCACGCGTGTCCAGAGTGCGGCAAGACATTCGCCACCTCATCCGGTCTCAAGCAGCACACGCACATACACTCCAGCGTCAAGCCCTTCCAGTGCAAGGTCTGCTTCAAGgctTATACTCAGTTTTCGAACTTGTGTCGTCATAAACGTATGCATGTAGCATGCAGAGCTCTAGTAGAATGTGGAAAATGTGGTCAATCATTCACTTCGTACGCATCTTTAACTAAGCATAAGAGATTCTGCGATACCGCTGCTGCAGCCACCGTTAATCTTCGAGGTCAGATTCCACAAGGTTTACCACAAATACCATCTCTACCAACTCTCGGAATGAATACCACAAATAATCCAAATCCATTGAGTTATCCTCTCTATCGAGGATTAACTTTACCTCTTCCTTACAATAAGTTACCGCACTACAGCGCTGGCCTGCTATCAGCTGCTGCAGCTGCTTATCAACCAGACTTTCTAAATCCATTACTTTTCAATGTTCAAGGTGTAAGATTGGCTATGGAACATGATATGGCTTTATCCAACGCTAACATGATATCTAAACAACAAGAAGGCCGAATGTCTGTTAAAAGCATTGATAGTTCTACATCTTTAGATGATTCCAAAAAAAGTAAAGACTTGGAATTCGACAACAATAGGAGAAGTAATGAAAATGCAGAGATAATGACACCGAGTAAGACGCTTAGTTTATATTCAAAGCAATCTTCACCTTCAATCGAGGATGTACCCCAGCAACGACCATCACCTATTATGCCAATATCAACACCGATAGTTCCTTTTAATTTCTCAAGAGATGATCTTAAACGTAAATCACCGTTCAATTATTCGTTAAAGATGAATAATAATGAGATAAAAAGGCATAAGTCAGTGTCTCCATCACCTAAAGATTTATCAAAAAGTATTACGAGTGATGATAAAAATTCTGAGTATTCTGAGACAGAGGAAGATACGAAGAAAGATCAAGGAGATCAACCTCTTGATTTGTCGGTGTCTCGGAAGCAAGCCGATAAAGAGTTTGAAGTGGATAATGATGATCGTTCCTTTCGAAATTCATCGGTAAAGTCATACTCGCCACCTGAAAGTCCTGTTGAAAGAAACAAGACTCCAGAAAACGATACTACTGATGTCGATGTAGAGGGAGTGGAACCGAAACGTGAGGACTCACCCGCACTGGTTTCACAGTCCCTGGCTTTCCCACTGCCTGTTTACCCGAACCATTATCCTTCGAGGTTCTACTTTAATTCTCCCGACTCTCTACTAAACGCATCGCATTCTCCCTACGTACCAAGCCCATTCAATTTTTTATCCCCACTTCTCGGCACTGACGGGCCTCAGCGGCCGCCGCGCCCTCCTAGTGCTTATTCTGGTGGCAAGTTGCGGGATAGATATGCTTGTAAGTTTTGTGGAAAAGTATTCCCGCGCAGCGCGAACCTCACTCGCCATCTACGCACTCATACAGGAGAGCAACCGTACAAGTGTAAATACTGTGAGCGTTCATTTTCGATTTCCTCTAACTTGCAACGACATGTCCGCAATATTCATAACAAAGAAAGGCCTTTTAAGTGTCCGTTATGCGATAGGTGTTTCGGACAGCAGACTAATCTCGACAGACATTTGAAGAAACATGAAGCAGAAGGTGGCGATTCCCCCAGTTCAGCCGATACAGAGCGTGAGGACGCATACTTCGATGACATCAGGTCATTTATGGGTAAGGTTACGTGCGAGCCTGGCAGCACTCCACCCGCCACCTCCCCGCATCCTCCACACCCTCACTCCTCCCATGCTCAACATCCCTCCGCGCTGCCACATCTCGCTGCTATTACCACATAG
Protein Sequence: MLQYRRMLNFDASPKMKISAKQVNPHSNPNAILTKLHSIKASFAFTRILDSEWKDRKVHNHNEKQDYQSKGQNIGVGQSKKVIKDAGFAYSRDALRDKRKPFVVSGNRHNAISILHSSSVFIVLLSATSRDGFWPDFLIRTVVIFSSTAADSQESGSPPPSPTDSVGSESAPTLVHIKQENMPPGADVKEYYGGLDFTLSDTYLSPNYAEYGAGYLSRPIDLQNQKFLDPDKSSKDKDEAIKDDEPEETSNFNIPNELTLKNGGIFARSNILVGTKYGPFMGKWGTQPLESKYAWEFLGKNGIRGWLDGTTEKSNWLKYIRSTSYTHDANVQHTLHAGEVWYKVIRDITPGQELLLGPRTPLPLQDILPTTDHQSSSVKYTQPLPEEEEREDTEPRCSFCDSPFPNIDTLDRHLVQAHAQPSAAFHCELCNRAYSSRALLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKAYTQFSNLCRHKRMHVACRALVECGKCGQSFTSYASLTKHKRFCDTAAAATVNLRGQIPQGLPQIPSLPTLGMNTTNNPNPLSYPLYRGLTLPLPYNKLPHYSAGLLSAAAAAYQPDFLNPLLFNVQGVRLAMEHDMALSNANMISKQQEGRMSVKSIDSSTSLDDSKKSKDLEFDNNRRSNENAEIMTPSKTLSLYSKQSSPSIEDVPQQRPSPIMPISTPIVPFNFSRDDLKRKSPFNYSLKMNNNEIKRHKSVSPSPKDLSKSITSDDKNSEYSETEEDTKKDQGDQPLDLSVSRKQADKEFEVDNDDRSFRNSSVKSYSPPESPVERNKTPENDTTDVDVEGVEPKREDSPALVSQSLAFPLPVYPNHYPSRFYFNSPDSLLNASHSPYVPSPFNFLSPLLGTDGPQRPPRPPSAYSGGKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDAYFDDIRSFMGKVTCEPGSTPPATSPHPPHPHSSHAQHPSALPHLAAITT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -