Basic Information

Insect: Achroia grisella
Gene Symbol: F56D1.1
Assembly: GCA_030625045.1
Location: JAULSB010000017.1:684529-693441[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 8.2 6e+02 1.9 0.5 1 23 50 73 50 73 0.85

2 34 2.1 1.5e+02 3.7 0.1 3 23 103 124 102 124 0.93

3 34 0.0045 0.33 12.1 2.8 1 23 145 167 145 167 0.98

4 34 0.0026 0.19 12.9 0.0 1 23 171 193 171 193 0.97

5 34 0.0016 0.12 13.6 0.5 1 23 198 221 198 221 0.96

6 34 0.0027 0.2 12.8 4.5 3 23 229 250 228 250 0.96

7 34 6.1e-05 0.0045 18.0 2.1 1 23 257 280 257 280 0.97

8 34 0.78 57 5.1 3.5 1 20 286 305 286 308 0.94

9 34 1.1e-06 8.1e-05 23.5 1.0 1 23 314 336 314 336 0.99

10 34 0.06 4.4 8.6 1.8 1 23 431 454 431 454 0.93

11 34 0.41 30 6.0 0.2 3 23 484 505 482 505 0.94

12 34 1.9 1.4e+02 3.8 0.1 2 23 527 548 526 548 0.95

13 34 0.013 0.95 10.7 0.1 1 23 552 574 552 574 0.97

14 34 0.0002 0.015 16.4 0.8 1 23 579 602 579 602 0.98

15 34 7.2 5.3e+02 2.1 0.2 2 23 609 631 608 631 0.90

16 34 5.2e-05 0.0038 18.2 0.9 1 23 638 661 638 661 0.97

17 34 0.053 3.9 8.8 0.4 1 20 729 748 729 752 0.88

18 34 0.0064 0.47 11.6 0.5 1 23 825 847 825 847 0.98

19 34 0.0076 0.56 11.4 0.2 1 23 851 873 851 873 0.95

20 34 0.063 4.6 8.5 0.4 1 23 878 901 878 901 0.90

21 34 0.008 0.59 11.4 5.4 1 23 907 930 907 930 0.96

22 34 0.00038 0.028 15.5 0.2 1 23 937 960 937 960 0.98

23 34 5.7e-05 0.0042 18.1 1.7 1 23 966 988 966 988 0.97

24 34 1e-06 7.5e-05 23.6 1.5 1 23 994 1016 994 1016 0.99

25 34 0.0004 0.029 15.5 5.4 1 23 1022 1044 1022 1045 0.96

26 34 0.41 30 6.0 0.9 1 23 1169 1192 1169 1192 0.94

27 34 4 2.9e+02 2.9 0.9 2 23 1217 1238 1216 1238 0.94

28 34 0.12 8.9 7.6 0.1 1 23 1262 1284 1262 1284 0.96

29 34 0.0013 0.095 13.8 0.2 1 23 1288 1310 1288 1310 0.98

30 34 0.0023 0.17 13.1 0.5 1 23 1315 1338 1315 1338 0.96

31 34 0.015 1.1 10.5 0.4 2 23 1345 1367 1345 1367 0.93

32 34 0.12 8.5 7.7 5.7 1 23 1374 1397 1374 1397 0.96

33 34 8.6e-05 0.0063 17.6 5.0 2 23 1404 1425 1403 1425 0.97

34 34 6.8e-05 0.005 17.9 0.5 1 23 1431 1453 1431 1453 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	8.2	6e+02	1.9	0.5	1	23	50	73	50	73	0.85
2	34	2.1	1.5e+02	3.7	0.1	3	23	103	124	102	124	0.93
3	34	0.0045	0.33	12.1	2.8	1	23	145	167	145	167	0.98
4	34	0.0026	0.19	12.9	0.0	1	23	171	193	171	193	0.97
5	34	0.0016	0.12	13.6	0.5	1	23	198	221	198	221	0.96
6	34	0.0027	0.2	12.8	4.5	3	23	229	250	228	250	0.96
7	34	6.1e-05	0.0045	18.0	2.1	1	23	257	280	257	280	0.97
8	34	0.78	57	5.1	3.5	1	20	286	305	286	308	0.94
9	34	1.1e-06	8.1e-05	23.5	1.0	1	23	314	336	314	336	0.99
10	34	0.06	4.4	8.6	1.8	1	23	431	454	431	454	0.93
11	34	0.41	30	6.0	0.2	3	23	484	505	482	505	0.94
12	34	1.9	1.4e+02	3.8	0.1	2	23	527	548	526	548	0.95
13	34	0.013	0.95	10.7	0.1	1	23	552	574	552	574	0.97
14	34	0.0002	0.015	16.4	0.8	1	23	579	602	579	602	0.98
15	34	7.2	5.3e+02	2.1	0.2	2	23	609	631	608	631	0.90
16	34	5.2e-05	0.0038	18.2	0.9	1	23	638	661	638	661	0.97
17	34	0.053	3.9	8.8	0.4	1	20	729	748	729	752	0.88
18	34	0.0064	0.47	11.6	0.5	1	23	825	847	825	847	0.98
19	34	0.0076	0.56	11.4	0.2	1	23	851	873	851	873	0.95
20	34	0.063	4.6	8.5	0.4	1	23	878	901	878	901	0.90
21	34	0.008	0.59	11.4	5.4	1	23	907	930	907	930	0.96
22	34	0.00038	0.028	15.5	0.2	1	23	937	960	937	960	0.98
23	34	5.7e-05	0.0042	18.1	1.7	1	23	966	988	966	988	0.97
24	34	1e-06	7.5e-05	23.6	1.5	1	23	994	1016	994	1016	0.99
25	34	0.0004	0.029	15.5	5.4	1	23	1022	1044	1022	1045	0.96
26	34	0.41	30	6.0	0.9	1	23	1169	1192	1169	1192	0.94
27	34	4	2.9e+02	2.9	0.9	2	23	1217	1238	1216	1238	0.94
28	34	0.12	8.9	7.6	0.1	1	23	1262	1284	1262	1284	0.96
29	34	0.0013	0.095	13.8	0.2	1	23	1288	1310	1288	1310	0.98
30	34	0.0023	0.17	13.1	0.5	1	23	1315	1338	1315	1338	0.96
31	34	0.015	1.1	10.5	0.4	2	23	1345	1367	1345	1367	0.93
32	34	0.12	8.5	7.7	5.7	1	23	1374	1397	1374	1397	0.96
33	34	8.6e-05	0.0063	17.6	5.0	2	23	1404	1425	1403	1425	0.97
34	34	6.8e-05	0.005	17.9	0.5	1	23	1431	1453	1431	1453	0.98

Sequence Information

Coding Sequence: ATGGCTAGCAATTCGAGAGCTGTGCAAATTAAGATAACTGGAGTCGACGATGGACCTAGTGATATATTAGCAAAGCAAATTAGCAGAAATAGCGCTGTAAATCTAATTCTATTCAGCACAATATGCCCATTTCGATTCAGCAGATTCTATATGTGTCTTTATTGTACtcaaaagtttttggaaatgcCCCAACTAGTGCTGCATACCCAAAAGGAACATAATGCGGTAGGGAAAAGAGATGTACGTAAAGCATTAAGTAGAACGGAGAAATCACAACCGATAAAAGTGAACGTAGTCGATGCCGCTTGCAAACTATGCAGCGCTGACATAGCTGATTTCAGCGATTTAAAGAATCATTTGTTACTGAAACATAAGAAGGATATAAACATCACAAATGATGGCGTCATACCTTTTAGAATAACGGATAAAGAATACCAATGCGTATTATGCGGACAGCATTTCGTAAAATATAGATTTCTCAACAAACATCTCAATGAGCATTACAGGAATTTCTCGTGCGAACAGTGCGGGGCTGGTTTTGTCACTGCGGGTGGTTTGAAAGGTCATTTAGGGACGCATCAAATAGGAGTATACCCATGTACGGACTGCGATAAAGTATACAAAACAGAAGCAACTAGACTAGACCATTATAAgaagatacatataaaaacgAAGAAGAACATCTGCAAACACTGTCAAGAAAGCTTCACAGATTACTACCACAAGAGGAAACATATGATATCTGTGCACGGTGTAGGTGCCAACGAGTACAAATGCAGTTTCTGCCCAAAAGTGTTTATGGTCAGCTCGCATTTAAGAGCGCACGAGAGGCAAACGCATTTGAAATTGAACACATATACCTGTGATATATGCGATCACAGAACTTATTATAAAGAAGCGATCAAAAAGCACCTAATTTGCCACAGCGGTGAAAGGAACTTTAAATGTGAAGTTTGCAATAAGGCATACGCAAGAAAAAGAACTCTAAAAGAACATATGCggatacataataatgatagaAGATTTGTATgtcaACGATCAACACCAATGAACATCCGTACATTACCGGAACATAAATATCCGGTGAAAATAAGAGTGCTTCATGTTGAGAAATCGATACTGGCTAGAGATAGTCCAAAGCTGCAAGGGTCTCAATCATGTCCTGTGAGAATCAATAGAATTGACGGTGGGGAAACAAGGAAAGATCTGCTTCAGAATGAGGCTAGCAGATGTACTGCAATTATTCTCATTAAAAATACCACCTTATGCCCATTTAGATTCAATAGATTTTACATGTGCATATACTGTACAAAGAGTTGTTATAACATATCCGAGTTAGAGAAACATACTGTAACGGAACACAGCTTGTTAGAGGAGAAAGATATACGCAAGGCGCTCAATAGAACGGGAAAATCGCAGCTTATTAAAATGAATGTAACTACATTCGGTtgcaaattgtgtaggatagaACTCAATGATTTTGATGAACTTAAACGTCATTTACTTGAGGAACATGAAAAGAAAATAGATGTTAATAATGATGGAACTACGCTGTTCAGGATTACCGATGATAAATGGGAGTGTGTTCTTTGTAATAGTGAATTTAATGGGTATATCAAATTGAATAATCATGTTAAGGAACATTACCGTAGATTCTTTTGTGAGCAATGCGGCGCTGGTTTTATGACTGCAGAGAGATTGAAAGGACATCTAAAAGTTCATGATAGTGGCGAATATCCTTGTAAAGTCTGTGGAAAAGTGTACAGTAGCGAATCTCGCAATCGTTCACACTATAAGACTATACACATGAAAAAGAGTCGGAGTGTCTGCAATTATTGCCCAGACTGGTTCAAAGATTATTACCAGAAAGTGAAACATATGATAGAAGTTCATGGTGACCAGATGAATAATTTCAAATGTAGTTTCTGCCCAAAATCATTTGTGCTCAGTTCAGCTTTGAAAGCGCACGAAAGACAGAAACATATCAGACTTAATTTATACACGTGTgacatttGTGAAGACTCGCTTGTCGATTGGGCAGATGTAGAGCTTAGAAAAGTTGAAGAAACCCGGAGACAAGAAGAACGTAGGAAATTAAACGATGAATTGAAGATGCGCCGGCGGCACGCGATGGTGCTTCTGGAGAACTCCAAGATTTGTCCATTTAGGTGGATGAAAAACTTATACTTGTGCTTTTATTGTGAACAACAGTTTTCCGATCCAGTCAAATTGAGGGAGCATAATACAGCAGAGCATCCAAACCAAAACTGTTCAGAAATAAAAGACGCAATgtcaaaattaaagaaatacgaGTTAATTAAAGTAGATATAACCAATGTAAGCTGTAAACTGTGTGAAGACAACGTCACAGATCTCCATGTATTAAAAACGCATTTATTATTAGAACACAAGTTGAATATAGACCCAAAATCAAAAGATGGAGTCTTACCGTTCAGGGTGTCGCAATATGATTTCCCATGCGCACTATGTGTCGAGCGATATGCGGATTTCAAATCATTAAACCATCATATGAACGTGCATTTTCAAAATTTCATATGCGAGCAATGCGGCACGGGTTTTATGACGCCGGAAAGACTGAGAACACACGCGTTCTCACACGAAACTGGGTCTTTTGCTTGCGATAGCTGCGACAAAGTTTTCCGCTCGACGAATGCGAAAAATGAACATTTTGCTACCGTCCATTTGCAAGTTAAACGACACAGATGTCCACATTGCTCGGAAACGTttcgaaattattttcaaagGAACAAACATATATCTAGCGTTCACGGTCTTAAATTGAAAGagtttaaatgtaatatgtGTCCTAGGGTGTTCAATTTGAGCGGGAAATTAGGGCTCCATATAAAGACAGTGCACTTGAAAATGAAAAGGCATACATGTGATGTTTGTGAATGGAAGTTTTATTCTAAATCGGAATTGAAGGACCATATGGTACGGCATGGAGGGGAGAGGAAATATAAATGTAGCGTTTGCAAGAAGGCGTACGCTAGGAAGTACACTCTACGGGAGCATATGAGAATTCACGAGAATGACAGGCGTTTTGTTTGTTCCATCTGTGGCACGGGGTTCGTACAGAATTGTAGTTTGAAGCATCACACGAAAGTACATCATCCAAATGCGGTTTCGGACAGCAAAGTGTCTTGCCGTGgAACCGACAGCACAATTAAGGAGAAATCTAAACGGACTGTGCCATTATTCCAAGTTGCCTACGACCGAACACTCTGTAGACCATTGGGAACTATAGTGAACTTCAGTCAATTGAAAAAGGATCGGGACTACGATTATGAAGTTACAGTGAAAAAAATCAGTCCCTCACGCAGTCCATCACCGCTTTCCATACCTCGATCAGAAACTCCAGTAAAAATATCCACAGACCCCGCAAAAGATAAAGAACTACAAAAAACAGGTGATATCAGGCAAAACGCGCTCACACTCTTCGAATTCTCAACAGTATACCCGTTTATTTACGGGAACAATAAAttcaaatgttttatatgttCGCAACCATTTTTAGAAACGCAACTTTTGAGGCAACACATGAATGACACTCATACATTCGCTCCCTTAAAGAGGTTGGTCAACAACAGAAGAGAAAATATCTTAAAAGTCGACATTAGTGATATAATGTGCAAGATTTGTTCTTTAAGACCAAAAGATCTATTAGAGTTAAAACATCATCTGAAGGAACATCAAAAACCTATAAATCCTGaattaaaagataatattataccGTTTAATTTGGACGGCCAGAACGGGGCATACAAATGCGTTATATGCGAGGAgtctttcattaaaatcaggATTTTAGTTATCCATATGAGCGTGCATTTCAACAACTACAGTTGTGAGGTCTGCGGCTCAGGGTTTATGACGTTGCGTCTTCTGAAAAAGCACTTGGAAGTGCACGAGAATGGAAACTTCCCATGTGATCGTTGCAGTAAAGTTTTTAATACAGCCTACAAAAGAACTCTTCATATAAGAGGTGTGCATATGAAGCAATTTCCTCGAAGGTGCCCAATGTGTCCGGAAAGATTTAATTCGAATTACAAAAGGACTATACACTTACAAGACGTACACAACCAATCGACGAGAGTTCATAAGTGCGACATATGTGAGAGGGCATTTAATTTGAAGTACCATTTGATTTGTCACACGAGGTCTGTCCATCTCCAGGAAAGAAACCAGCAATGCGATGTCTGCCATCAGAGATTCTGCAACAAGGAGACATTGAAGCGGCATATGATAATCCACACGGGAGAGAAAAACTATAAATGCGGAATTTGCGGCATGGCGTTCTTAAGACGGAAAAATTTGAAAGATCATCTAAGACTACATGGTTTATCATGA
Protein Sequence: MASNSRAVQIKITGVDDGPSDILAKQISRNSAVNLILFSTICPFRFSRFYMCLYCTQKFLEMPQLVLHTQKEHNAVGKRDVRKALSRTEKSQPIKVNVVDAACKLCSADIADFSDLKNHLLLKHKKDINITNDGVIPFRITDKEYQCVLCGQHFVKYRFLNKHLNEHYRNFSCEQCGAGFVTAGGLKGHLGTHQIGVYPCTDCDKVYKTEATRLDHYKKIHIKTKKNICKHCQESFTDYYHKRKHMISVHGVGANEYKCSFCPKVFMVSSHLRAHERQTHLKLNTYTCDICDHRTYYKEAIKKHLICHSGERNFKCEVCNKAYARKRTLKEHMRIHNNDRRFVCQRSTPMNIRTLPEHKYPVKIRVLHVEKSILARDSPKLQGSQSCPVRINRIDGGETRKDLLQNEASRCTAIILIKNTTLCPFRFNRFYMCIYCTKSCYNISELEKHTVTEHSLLEEKDIRKALNRTGKSQLIKMNVTTFGCKLCRIELNDFDELKRHLLEEHEKKIDVNNDGTTLFRITDDKWECVLCNSEFNGYIKLNNHVKEHYRRFFCEQCGAGFMTAERLKGHLKVHDSGEYPCKVCGKVYSSESRNRSHYKTIHMKKSRSVCNYCPDWFKDYYQKVKHMIEVHGDQMNNFKCSFCPKSFVLSSALKAHERQKHIRLNLYTCDICEDSLVDWADVELRKVEETRRQEERRKLNDELKMRRRHAMVLLENSKICPFRWMKNLYLCFYCEQQFSDPVKLREHNTAEHPNQNCSEIKDAMSKLKKYELIKVDITNVSCKLCEDNVTDLHVLKTHLLLEHKLNIDPKSKDGVLPFRVSQYDFPCALCVERYADFKSLNHHMNVHFQNFICEQCGTGFMTPERLRTHAFSHETGSFACDSCDKVFRSTNAKNEHFATVHLQVKRHRCPHCSETFRNYFQRNKHISSVHGLKLKEFKCNMCPRVFNLSGKLGLHIKTVHLKMKRHTCDVCEWKFYSKSELKDHMVRHGGERKYKCSVCKKAYARKYTLREHMRIHENDRRFVCSICGTGFVQNCSLKHHTKVHHPNAVSDSKVSCRGTDSTIKEKSKRTVPLFQVAYDRTLCRPLGTIVNFSQLKKDRDYDYEVTVKKISPSRSPSPLSIPRSETPVKISTDPAKDKELQKTGDIRQNALTLFEFSTVYPFIYGNNKFKCFICSQPFLETQLLRQHMNDTHTFAPLKRLVNNRRENILKVDISDIMCKICSLRPKDLLELKHHLKEHQKPINPELKDNIIPFNLDGQNGAYKCVICEESFIKIRILVIHMSVHFNNYSCEVCGSGFMTLRLLKKHLEVHENGNFPCDRCSKVFNTAYKRTLHIRGVHMKQFPRRCPMCPERFNSNYKRTIHLQDVHNQSTRVHKCDICERAFNLKYHLICHTRSVHLQERNQQCDVCHQRFCNKETLKRHMIIHTGEKNYKCGICGMAFLRRKNLKDHLRLHGLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00736793;
90% Identity: -
80% Identity: -