Agri021083.1
Basic Information
- Insect
- Achroia grisella
- Gene Symbol
- JARID2
- Assembly
- GCA_030625045.1
- Location
- JAULSB010000403.1:5415603-5433843[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-15 1.1e-11 45.6 0.0 8 89 1043 1120 1037 1120 0.87 2 2 5.1 1.5e+04 -2.9 0.1 2 21 1127 1147 1126 1158 0.76
Sequence Information
- Coding Sequence
- ATGTCTTGCGATGCTTCTCAGTATGGACTGGTGCTGTTCTGGACAGGAACTGTACAATGgaAAGTGCAAGCTCAACGGAAATTTGCACAGGGCGCATATATGCCACCCCTACACCAAACAAATCACATTGTAGAACGTCGTGCGGATATGGTAGGTGGTAAAGATGACCAAAGATCATCTACCACTTACAATAGTATTTCGGCAAATTCGTTACTGGATCTGGTGTCATTTGCAAatatacataCCCATCAAAGGTTGCAACCAGTGGTTCGTTTGGAGAGGTTAAAAACCAATGAACATACCATAACAGAACTGCTGCAGAGAAGATCATCACCAATAGAGGGACTACTAATACCTAGGCGTATTAAACGTCTCAATAaaccaaaacaaattaaatctaAAGCAGAAAAATGGCCTGTAAATGGCAATACGACTGTACGTAAATCAAAAGCAAAAAGAGTACAGGCAAAAGAGAAGATAAAGGTGCCTCGAAGGAAGAGAAGGCGACATACAGACTCAAAAGATCAAGATGAAGATAATACACCTCTTAAATTTTTAGCAACATCTTCTAAAAATAAGCAAGGTGCAGGAGGCAAAAGACGCAAGTCAGGagCAGCAGAACCTTCAAGAAAGCAAACTCGAAAAGCGCCTGCCGCTAAGACTTTACACAGGAGAAAAAAGCAATATACAGTGAAGTCTAGTGGAAATAATAATGAAGCTTCTCCTGTATTATCTTGCAAAAAAATCATTAAGCGACCTGGGAAGAAGAAACCAGAATTCAACTCGCTATCGCTAACTTCGAAATCGCCGGCTAACTCGCCCTTAAATATCAAACccgaaaatattaatataacaggGCTAACGGCGAATTGCACAGATTGGGAAGAGTTCGCCCGTTTGAATTCCCATATTCCTGTAGATGTTACTGCAGATGTTACTGCAGATGTTACTGCAGATCCTACTGCAGATTCATTATCCATGGAACATCCATCTCTCCatgaagaatatattattaaagatagcTCATCAAAATTAGGCTCTATTATTGAGCAGTCTATTCAGTCAATTAAAACTATTGAAATACCTACGACTTCTACTGAAAATGGTTCCGTCTTAGTAGAAGCAAATATTTGCACACCTGTATCACCTTGCCGCAGTTCACAAAGTGGATATTATGGCGCGAGTGAGATACAGCAATGGATTAATAATTCCATGCAGAACGTGGACGATGATATCTTTAAAATCCCCGCTGTACCTGACCCAATTAGCGATTTTTCTATAGACGAGACGAAAAATGAAATTGACGACTCTTCATATATGTCGCCACTGGTTTACTGTGATTCCGAATGTCCTTCGATGCGGTACTTCACAGTGAAGGATATTATGAACAGACCTATTATCAACTTGGGAACACGTTGCAACTCATGCGTATACTGCAATCGTGTGGATAAAATGCAACAATCGTCACAACAACCGCCATCTACGGACGTCAACAATTTTACACCAAGTTACGAGTTTGAACCGATTGACCTTGTCAACGAGGATGACGATACCCAACAAAAGCCGTATCCCGACGACTTCCTACAGAGCTGCCTAGCTTCCGAACAGCAAGAGGCACCTAGAAATGAGTCACCTAGCCATGAGTCACCTAGAAATGACTCACCTAGTTATGAGTCACCTAGAAATGAGTCACCTAGCTATGAATCACCTAGGAGTGAGTCACCTAGCAATGAATCACCTAGCAATGAGTTACCTAGCAATGAGTTACCCAGCAATGAGTCACCTAACAATGAGTCACCTAGCAATGAGTTACCTTGCAATGAGTCATCTAAGATTGAGTCACCTAGCAATGAGTTACTTTGCAATGAGTCACCTAAGATTGAGTCACCTAGCAATGAGTTACCTTGCAATGAGTCACCTAGCAATGAGTCACCTAGCAGTGAGTTACCTAGCAATGAGTTACCTTGCAATGAGTTACCTTGCAATGAGTCACCTTGCAATGAGTCACCTAGCAATGAGTCAACTAGCAATGAGTCACCTTGCAATGAGTCACCTAACAATGAATCACCTTGCAATGAGTCACCTTGCAATGAGTCACCTAACAATGAGTCACCTAGCAATGAGTTACCCTGCAATGAATTACCCTGCAATGAGTCACCTAGCAATGAGTCACCTAACAATGAGTCACCTTGCAATGAGTCACCTAACAATGAGTCACCTAACAATGAGTCACCTAGCAATGAGTCGCCTAGCAATGCGTCACCTAGCAATAAGTCGCCTAGCAATGCGTCGCCTAGCAATGCGTCACCTAGCAATGAATCACCTACCGAAGAGTTACCTACCAATGAGTCATCCAAAATCAAAGAGAAATTTTTCTTCTTGGATTTGTTCCCTGGCATTAgcaatgatattattaaatttgtgtcAACAGAAAGCCCACTGGAAGAAACGAGAAATATAATGCGGGCTTTACTAATATCCAAGGCTTTAATTTCACGTAAGGACAAAGATAGGTTGGTTGAACACAAAACTCTTTTAAGTCAGCTGTTGGCCACACTCAATATGAAGTTACAACGCAAAACTGGTCGAACACCTGTTCCATTTCCTGAAACATCTCCAGATGAAACTAGTGCTTGTGAAGGTGGAAAGGAGGATGAAGAAGGATCACCTGATTCTGTACCATCTACATCtcttactaaaaataaaaaaaagagatatATTCGTAAAAAGAATTCAAATAGTCAGCCATCCACTAGTAAAATGGCAACTCGGGCTACTAAAgctaaattaactaaaaatgaaAAGACATTTGAAGACAAAGCGCTCCCCAAAAAGTCAAACGCACAGACGTCTAAGAAGAAAAAATCTAACATTCAAAATAATGAGAAATTGGGAGAGCTAATGGACGCGCCTGTTTATTATCCTAACGAAGAAGAATTTAAGGACCCTCTAGCATATATTACGAAGATTATGCCGACTGCTTCGAAATTTGGTATTTGTAAAGTCGTGGCACCGAAGAATTTCCAGCCGCCGTGCTCTGTGAAAAATGAGATTAGATTCAATGTCAGTAACCAGTATCTGGCTCGTCTGTACAAACGCTGGGGACCTATTACCAAAGAGATATGTGCCATTAAAACATACCTGATATCACAAAGTGTTTTGTTTAATAAGGGTCCTTTGGTGGCCAATCTGGAAGTCAGTCTACCAAAACTGTATCACGTCGTTCAAAAACACGGCGGTTTGAAGACGGTAATGGAGAAAAAGCGTTGGGGTCGAGTTGCCGACGATCTTCGCAATGGTAGAACGTGCAACCCCGAAAAATTGGACATACTTTACTTAAGATATTTGCTCCCTTATGATACTCTGTCTAACAAAGAGCGTCAGGAAATCATGGAATCTGTCGAAAAAAGTTGGGAAAAAAGAAATGCAAAAATGCTCGAACGGGCTACGAATCCATTACACCGACAGAAGCGTCTGCTTGGCGAGAGCGATTCTTCAGGGGAAGAAACTGAAGATGAGAGCAGCATGTCGTCTACGCTTGCAGAAGCCGAAGATTGCATGGTTCCCGGAAGGAGTATGACCCTCGCTACTTTTGCTAAGGCGGCAGCAGCGGCTCAGGAGGCCTATTACGGACGATCGCAAGAGCCACCACAACCGGCCGACGTGGAAAATAAATACTGGCGGTTCGTTGTAACGCGCAACGAACATGTTTGCGTGTACAGCGCGTCTCTAGATACTGGTGACGAGGGGTATGGCTTCCCCACCGACAGCAGCGACCCCTATGGAACACATCCGTGGAATTTAAAAGTTATAAGCCAAAATGAAGGAAACGTATTGCGATCACTGGGTCCAGTGTTAGGAGTGACGGTGCCAACACTCCATTTCAGTATGATGTTCTCCACCAGCTGCTGGCACCGGGATCCTCATGGGCTACCATGGATAGAATACATGCACCGAGGTCCTCCCAAGATATGGTGCGTACTGCTtcgtacattattatatttatatggaaaaGGGACATCAGCATTCCATGTTACTTACAATTGA
- Protein Sequence
- MSCDASQYGLVLFWTGTVQWKVQAQRKFAQGAYMPPLHQTNHIVERRADMVGGKDDQRSSTTYNSISANSLLDLVSFANIHTHQRLQPVVRLERLKTNEHTITELLQRRSSPIEGLLIPRRIKRLNKPKQIKSKAEKWPVNGNTTVRKSKAKRVQAKEKIKVPRRKRRRHTDSKDQDEDNTPLKFLATSSKNKQGAGGKRRKSGAAEPSRKQTRKAPAAKTLHRRKKQYTVKSSGNNNEASPVLSCKKIIKRPGKKKPEFNSLSLTSKSPANSPLNIKPENINITGLTANCTDWEEFARLNSHIPVDVTADVTADVTADPTADSLSMEHPSLHEEYIIKDSSSKLGSIIEQSIQSIKTIEIPTTSTENGSVLVEANICTPVSPCRSSQSGYYGASEIQQWINNSMQNVDDDIFKIPAVPDPISDFSIDETKNEIDDSSYMSPLVYCDSECPSMRYFTVKDIMNRPIINLGTRCNSCVYCNRVDKMQQSSQQPPSTDVNNFTPSYEFEPIDLVNEDDDTQQKPYPDDFLQSCLASEQQEAPRNESPSHESPRNDSPSYESPRNESPSYESPRSESPSNESPSNELPSNELPSNESPNNESPSNELPCNESSKIESPSNELLCNESPKIESPSNELPCNESPSNESPSSELPSNELPCNELPCNESPCNESPSNESTSNESPCNESPNNESPCNESPCNESPNNESPSNELPCNELPCNESPSNESPNNESPCNESPNNESPNNESPSNESPSNASPSNKSPSNASPSNASPSNESPTEELPTNESSKIKEKFFFLDLFPGISNDIIKFVSTESPLEETRNIMRALLISKALISRKDKDRLVEHKTLLSQLLATLNMKLQRKTGRTPVPFPETSPDETSACEGGKEDEEGSPDSVPSTSLTKNKKKRYIRKKNSNSQPSTSKMATRATKAKLTKNEKTFEDKALPKKSNAQTSKKKKSNIQNNEKLGELMDAPVYYPNEEEFKDPLAYITKIMPTASKFGICKVVAPKNFQPPCSVKNEIRFNVSNQYLARLYKRWGPITKEICAIKTYLISQSVLFNKGPLVANLEVSLPKLYHVVQKHGGLKTVMEKKRWGRVADDLRNGRTCNPEKLDILYLRYLLPYDTLSNKERQEIMESVEKSWEKRNAKMLERATNPLHRQKRLLGESDSSGEETEDESSMSSTLAEAEDCMVPGRSMTLATFAKAAAAAQEAYYGRSQEPPQPADVENKYWRFVVTRNEHVCVYSASLDTGDEGYGFPTDSSDPYGTHPWNLKVISQNEGNVLRSLGPVLGVTVPTLHFSMMFSTSCWHRDPHGLPWIEYMHRGPPKIWCVLLRTLLYLYGKGTSAFHVTYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -