Basic Information

Insect: Achlya flavicornis
Gene Symbol: -
Assembly: GCA_947623365.1
Location: OX392496.1:3547058-3558540[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.019 1.2 10.1 1.3 1 19 339 357 339 359 0.95

2 14 0.54 35 5.5 0.2 1 23 376 399 376 399 0.90

3 14 0.61 39 5.3 0.1 2 20 437 455 436 457 0.84

4 14 0.083 5.3 8.0 0.1 2 23 463 484 462 484 0.96

5 14 6.2 4e+02 2.1 1.0 1 8 735 742 735 753 0.78

6 14 0.31 20 6.2 2.2 3 23 772 792 770 792 0.91

7 14 0.018 1.2 10.1 0.1 1 23 797 819 797 819 0.98

8 14 4.4 2.8e+02 2.6 0.7 2 23 841 861 840 861 0.93

9 14 5.7 3.7e+02 2.2 6.0 3 23 916 936 915 936 0.95

10 14 2.3 1.5e+02 3.5 2.1 2 23 952 973 951 973 0.94

11 14 4.4e-07 2.8e-05 24.6 4.6 1 23 979 1001 979 1001 0.99

12 14 0.0048 0.31 11.9 0.2 2 23 1007 1028 1006 1028 0.96

13 14 0.00099 0.064 14.1 1.8 3 23 1036 1057 1034 1057 0.95

14 14 0.0013 0.085 13.7 0.8 3 23 1096 1117 1095 1117 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.019	1.2	10.1	1.3	1	19	339	357	339	359	0.95
2	14	0.54	35	5.5	0.2	1	23	376	399	376	399	0.90
3	14	0.61	39	5.3	0.1	2	20	437	455	436	457	0.84
4	14	0.083	5.3	8.0	0.1	2	23	463	484	462	484	0.96
5	14	6.2	4e+02	2.1	1.0	1	8	735	742	735	753	0.78
6	14	0.31	20	6.2	2.2	3	23	772	792	770	792	0.91
7	14	0.018	1.2	10.1	0.1	1	23	797	819	797	819	0.98
8	14	4.4	2.8e+02	2.6	0.7	2	23	841	861	840	861	0.93
9	14	5.7	3.7e+02	2.2	6.0	3	23	916	936	915	936	0.95
10	14	2.3	1.5e+02	3.5	2.1	2	23	952	973	951	973	0.94
11	14	4.4e-07	2.8e-05	24.6	4.6	1	23	979	1001	979	1001	0.99
12	14	0.0048	0.31	11.9	0.2	2	23	1007	1028	1006	1028	0.96
13	14	0.00099	0.064	14.1	1.8	3	23	1036	1057	1034	1057	0.95
14	14	0.0013	0.085	13.7	0.8	3	23	1096	1117	1095	1117	0.95

Sequence Information

Coding Sequence: ATGTCGGAGAATACTAAAAAAAGATGTCGAAAATCCAAATTGGTGCCACGGATTTATGATTTTGAAGACAATAAAAACGAAAGCGATGACGCGGGCACGAGTGAAAAGGCATTACCATCAAAGTTACAGAAGTTCATACAAGAAATTGAAAATGAAGAATATAGTACCATACAAAATAATTCATCTCCATTTCAAAATAATGTGGTGAATCCATTACAAAATTACATGACATTTCCCTTACAAAATTATATACCATCTACTCCCATGCAGTTCTCCGTCAAGGTGGAAGTTGAGGAATGTGATGAACTAGAGTTGGATATTAAGGAACAAAATTTGGCAGGTGAAACCGGAAAATTTAACAATACCCAAGATTCTGTACCATCAATATCAGATATTGATATCAGTAAAGAAGCTGATAAGTTATTAATGAAAGCAGAAAAGATTAATTTAGATCCAGATATGTCTCTAGAATGCACGGAGTCATCAATCCCTTTAGAATTAGATTCCAATATGTCTCAAAACTGTATTGATCATAAAGAGAAAGAGAAACAGAAGCGAAAATATTTCTTGTTGTCCAAAGAAGACATCTTAAGTTATCAACCAGACCCAAATGATATAGCAGGCAAAATATTATTTATAGAAGTTAGGAACATCCTAGCACGGTCAATGAAAAGCCAAAGCAGTTTGGAGATAGGCTTTCATGACACATTAATACAAACAGCTTTATTAGAGAAACAGCTCACAGTCAGTCAGTACAAAGATAGCTTATTTATGTACAAGTGTTATATTTGTACCAAAGCTTGGTGGCACTTGTATCCGTTCCGAGAACATATAAGACAACATCATGAGGCAGATCTGATGGTAAGCACGGAATCAAATGGTCCGGAACTCAATATGATATCATATATAGGAACTGTACCAGGGAACACAGATATCGCAATTGATTCTAATTGCTGGCACTGTGGAAAAATCTATGGTATTCATAAAAAGATTCAGGGCAACAATACAACTAGTTTTGATTGCCTTTATTGTACGAAAAAATTCTCATCATGCATTCAATTGATAACACACGAAGGAGTTTGCTTCTGGCAGATGCATAAGACGCTAAAAGATGAAGCACAGTGCTTCAAGTGTCTGTACTGTCTAGTAATTGTATTCAGTAACTCTGAACTGCAAGATCATTTAGTTCTACGGCATTCTGTGAGGTCTGATGTGCCAATGCCGGCTACATTTAGATTCTGTCCGTATTGTAAAGGAAAATACTTTAAGTTCAATTTACATCCATGTCCGAAGCGATCAAGTCGTGTGCCGTGCTTGCATTGCAATAGGAAATTTCCCAATAACATGTTGCGGGATGCACACTTAATGTTATCAAAGGTTAATGTCAAATGTCCTATATGTGGTATTGTTTTGGCTAAGGAATGCATGATGATGGTACATCTATTGGTGCACAGCAATGACTTCACGATGTGTTCTAAATGTATTTTGTGTACGGATATCTACGTTTTCTTGGATGAAGAGGCTCAGAGGGATCATAGGATTGTGCGCCATAATTTGAGGCATGACCGTAGGAGGATTATTTATGAAATGGTGTTAATACCGAATAAATTGTTGGTAAATCCTTGTCCACCACTAATACTTAAACCAAATAAAATAACGATGACCCCAAGCAGCATACCACCGAAAAATATAATACAAAGTTCTAACAACATAAATGAACTGAATTCTGAAGTAATGCTGGAAGAAAAAACAGACGACGTGAACACGAACGTTACAGTAAACGAAGAATCAGTGAAAGATGTAACAGAAGTAATCAAAGTGGAACACAATGAATCGATAGAAGAAACGCCAGACTACGAGAGTATTATCCAAATTAATCAAATAGGACCAGAGATAATAATAAAAACAGAACGAAATGAAATAGAGCCGGATAATTACAATAATCATATATCTGATATAAAACAAGAGCTGGAGAATGCTGATACAATCGAAAGTAATACAGCAGATTGCGAGCAGTTGCTATCCAACGTATTTGGAGTAACAGAAAACTTCTCAAACATGAGATACGAAGTCAAAGCAGAACCACAAGACGAAAACTTAGAAGAAGACTTATCAAGCGACGAAAATATGTATTTAGATTCCTCAGAACCGCAAGTGATACTCGACCCTGATATCGAATCCTCAAAACGTAAACGTAAAATATACGAATGCAATAAATGTGGCTACAAAAACTACCACAGAGAATACAAATTGCATTTGGAAAATAAATGTGAGCCTGGGCAAGAAGTTGTGGAAAAGAAAGCAGATTATGGATGTACGAAATGCAATAAAAGCTACTCTAGTATGAAAAGATATATACAGCATTTCACGCAGCATGGATACAATTGCTTTACTTGTCCAGTATGCTTGGAGGAGTCTGAAAATCTGTCATTATTTAGTGCACATATAAGGTACCATATACGGAGGAGTTATGTTAAATTATTGCTCATAAGTAAAACGAATAAGCAAAAAAGGGTGTTACAGTGTAAAAAGTGTAAAGGGAAAGTGACGTTGGACAATTTTTTCGCACATTGGGAGTCGCATTTGGAACTTGGTCAAGTCACTGGCGGAGATGAAGTGGAGAAATGTGAGGAGGACACTCCAGTAGAAGTCACTACGGCATTGGAACCTGAAACTATGAAGGAAGCTATCAAACAACTGGTACACCCAGGTCGTCGTCACCAACATAGGAAGCTACAGAAGGACTGCAACGTGTGTCACAGACACTTTGACAGGGTGAACGATTGCAAGAGACATCTAATAGAACATCTACTGGTGGATGCATACGCTAACAAACCGCAGACCAAACTGCTGAAGTGCCAGATATGCTGTGAAGCGTACTGGACGTCTGACAAATACAAACAGCACATGAGAGACCACGGCTCACTGCCAATCTTCAAATGTGAGATGTGCAACAAGACTTTCAGCGACTCCAGCAATTTTACCAAACACAAGAAAACTCACAATCTACTCGCACTCATATGTGATATATGCGGGAAGAAGTTTCAAGCGAAAATATCTATTGAGAAACATGTGAAGATGCACCTAACAACCGAACCAATAAACTGCAATCTATGTCCAAAAGTGTTCTACACACCATCATCACACAAGAAACACATCAGAAACTACCACGACAAAACAAAACCCAAATTTAGATGTTTAATTTGTTTAAAATGGTTTATGTGTCAAAAAGACAAGTGGGACCACATGTGGGACGTGCATAAAGAAAGAAAAAAGAAGGCGGACTGTCCAATATGTAACAAATCATTCAGGAAATTCCAAGAAGTTAAATCGCATGTAAAGAATGAACATAACATGTATACCACAGTCTTAAATATGAAGTTGTTTAATAAAGAAGCAAAGAAACAAATGTCCGATGCGTTGGAGAAGTCTTTGAAAGAAGAAAAAGATGCTATGCAGAAGGAAACATTGATAGTTTTTGAATAG
Protein Sequence: MSENTKKRCRKSKLVPRIYDFEDNKNESDDAGTSEKALPSKLQKFIQEIENEEYSTIQNNSSPFQNNVVNPLQNYMTFPLQNYIPSTPMQFSVKVEVEECDELELDIKEQNLAGETGKFNNTQDSVPSISDIDISKEADKLLMKAEKINLDPDMSLECTESSIPLELDSNMSQNCIDHKEKEKQKRKYFLLSKEDILSYQPDPNDIAGKILFIEVRNILARSMKSQSSLEIGFHDTLIQTALLEKQLTVSQYKDSLFMYKCYICTKAWWHLYPFREHIRQHHEADLMVSTESNGPELNMISYIGTVPGNTDIAIDSNCWHCGKIYGIHKKIQGNNTTSFDCLYCTKKFSSCIQLITHEGVCFWQMHKTLKDEAQCFKCLYCLVIVFSNSELQDHLVLRHSVRSDVPMPATFRFCPYCKGKYFKFNLHPCPKRSSRVPCLHCNRKFPNNMLRDAHLMLSKVNVKCPICGIVLAKECMMMVHLLVHSNDFTMCSKCILCTDIYVFLDEEAQRDHRIVRHNLRHDRRRIIYEMVLIPNKLLVNPCPPLILKPNKITMTPSSIPPKNIIQSSNNINELNSEVMLEEKTDDVNTNVTVNEESVKDVTEVIKVEHNESIEETPDYESIIQINQIGPEIIIKTERNEIEPDNYNNHISDIKQELENADTIESNTADCEQLLSNVFGVTENFSNMRYEVKAEPQDENLEEDLSSDENMYLDSSEPQVILDPDIESSKRKRKIYECNKCGYKNYHREYKLHLENKCEPGQEVVEKKADYGCTKCNKSYSSMKRYIQHFTQHGYNCFTCPVCLEESENLSLFSAHIRYHIRRSYVKLLLISKTNKQKRVLQCKKCKGKVTLDNFFAHWESHLELGQVTGGDEVEKCEEDTPVEVTTALEPETMKEAIKQLVHPGRRHQHRKLQKDCNVCHRHFDRVNDCKRHLIEHLLVDAYANKPQTKLLKCQICCEAYWTSDKYKQHMRDHGSLPIFKCEMCNKTFSDSSNFTKHKKTHNLLALICDICGKKFQAKISIEKHVKMHLTTEPINCNLCPKVFYTPSSHKKHIRNYHDKTKPKFRCLICLKWFMCQKDKWDHMWDVHKERKKKADCPICNKSFRKFQEVKSHVKNEHNMYTTVLNMKLFNKEAKKQMSDALEKSLKEEKDAMQKETLIVFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01252314;
90% Identity: -
80% Identity: -