Basic Information

Insect: Achlya flavicornis
Gene Symbol: -
Assembly: GCA_947623365.1
Location: OX392496.1:921176-938211[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0015 0.099 13.5 3.8 1 23 294 316 294 316 0.99

2 10 0.19 12 6.9 0.4 2 23 324 346 323 346 0.90

3 10 0.0088 0.57 11.1 0.7 1 23 380 402 380 402 0.97

4 10 3.8e-06 0.00024 21.7 1.3 2 23 407 428 406 428 0.96

5 10 0.023 1.5 9.8 0.4 1 23 434 456 434 456 0.96

6 10 0.0061 0.39 11.6 2.4 2 21 463 482 462 487 0.93

7 10 0.0043 0.28 12.1 0.5 1 22 495 516 495 518 0.88

8 10 0.0018 0.12 13.3 1.9 1 23 524 549 524 549 0.96

9 10 7.4e-06 0.00047 20.8 0.9 1 23 558 580 558 580 0.98

10 10 0.081 5.2 8.1 0.8 1 23 586 609 586 609 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0015	0.099	13.5	3.8	1	23	294	316	294	316	0.99
2	10	0.19	12	6.9	0.4	2	23	324	346	323	346	0.90
3	10	0.0088	0.57	11.1	0.7	1	23	380	402	380	402	0.97
4	10	3.8e-06	0.00024	21.7	1.3	2	23	407	428	406	428	0.96
5	10	0.023	1.5	9.8	0.4	1	23	434	456	434	456	0.96
6	10	0.0061	0.39	11.6	2.4	2	21	463	482	462	487	0.93
7	10	0.0043	0.28	12.1	0.5	1	22	495	516	495	518	0.88
8	10	0.0018	0.12	13.3	1.9	1	23	524	549	524	549	0.96
9	10	7.4e-06	0.00047	20.8	0.9	1	23	558	580	558	580	0.98
10	10	0.081	5.2	8.1	0.8	1	23	586	609	586	609	0.93

Sequence Information

Coding Sequence: ATGAGTACCGACTTCAGGTATATCCCTATTAGTTCATTGTGTGAAGGTTGTCTAAGCTCTGATAGGAAATTAACGCTGATTTACGAAGAAGAAGTTAAGAATTTCTTCCGAGGAATTGTCGATTCTATCAATCACATTCATCAGCTTTCATTATGTTGGGAATGCGTAGCTCTTGTACACAGGATATTGAAGTACATGAGACAAGTGAGGCAGGCGCACGAATTCCTCATCAAGTATATGATATCCCAAGCAAAAGACCTCAAATCGCTATCAAATCTATCAATAACCGAAATAGACTCACAAGAAATATCACAAACAATAAATAAAAGAACAGAAAATAGACATATAGACTTGCCATTTAAGATAGAAACTAGGAACTCATTTAAAAATGAGATAAATGGCCGACGTGTTTCCGATAATAAATTTATACATGATAAAGATTATGAGAATGTTGTGACTGTGAAGATTGAGCGGCAGGATGATGATTTTGCTGAAGCCGAGGCTTTTTGTGATGATGATGATGATGATAATAAGCTTAATGCTGTTATGTCAAAAGATAGAAGAAGACTGAGCGATGACTTCAATGAATCTGACGATGAGCCACTAGGTACTATCAAGAAGAAGACAGAAACATTAAAGAAAAGAAAGGGAAGACCTAAGAAGACTGACAAGAGGGAAGCAACAAAGAAAGTGAAAGAAGTGAAGAAGAGACGGAGAAAGAAGGAGAAGTACGGAGTAGTGAACAACGCTAGGATACAGAAGAAGTTACAGCAGTTGAACGTACCTAGCGGACAACTTGAAATGGTTATATTGAGCTGGAAAGAGGTGGGCGAGGAACGGCAGCAGACCCTCACGAGTCCGTCGTTCACTCGTCTCCAGTACAAATGCTACGAATGCGTCATTGGATTCAGTCATAAATCAAAACTTGATAATCATCGGAAGAAACACGAACCGTCGGCGGGGCCGATGGAGTGCGAGGTGTGCGGCGTGCGCTGCGGACACTCGTCCGCCGCGCTCGCGGCTCACTTGCGGAGGCACCGGGTCCGATGGCGGTGTATACTGTGCGGGGGCAGTTGGTCCCGCGCCGACGTGGCGGCCGACCACTCGGCGCGCGCGCACGGCGCCCCCGCGCCCACACACACCTGCACACTCTGCGGCGCTGTCGAGACTACATTAGGCAAATTACGCAGACATTTGAAAGTCCACGCCGAACGTCAAAAATGTGAATTGTGTGGAAAGACATTTAGCGACAGGACCTCACTGCGAACACATTTATTTATACACAAAGGAGAAAAAGAGTTCGCTTGTCCCCGTTGCGATAAAAAGTTTCTATTTAAAAAGGCAATGGAGATTCATCTAGTTACACACGACCAATCCGCCAACCTATATTGTCATGAGTGTGACCTCAATTTTAAGAATAAAATGTCGTACTATCAGCACATAAAATATAATTTGAAGCATATAGACCCAGCTAAACTCAAGTACGCGTGTGAACTTTGCGACAAGAAATTCGCGAAAGCGTCGAGACTACACGAACATAATTTAGGAGTCCATCTCAAAATTACACCATTCCACTGCACTATAGATGACTGTGATGTTTCGTACTCGTCGCGGCCGGCGCTGCGCACGCACGTGCGCATGTGCCACCGCGCCGCGCGCGCGCTCAGGAACCATGTGTGCGACAAGTGCGGGAAGGCTTACTCGACCAAGAAAGTTCTAGAAGGTCACATCCGCACCCATACAGGCGAGCGTCCCTTCAAGTGCGTCCACTGTCCCTCCACGTTCGGCTACGAAGCGGCTCTCTATAACCACAACAAACTCGTACATCTCAAGATCAAGAATCGTCGCACCACAGAGCAACCAAACCCTGTCCCACCGATCCCCAACCCTGTTCCAGTTGTCCCCAACAATATCTCGGTTGTCCCCAACAATGTCTCAGTTGTCCCCAACAATGCCCCATCGATCCCAAATATGCCCGAAGCTTCCACCGGCTGGCAGCTCACTCTGAACATAGCAAACGAAGCTCAAGACCATACTAATATTGATATTACGTAA
Protein Sequence: MSTDFRYIPISSLCEGCLSSDRKLTLIYEEEVKNFFRGIVDSINHIHQLSLCWECVALVHRILKYMRQVRQAHEFLIKYMISQAKDLKSLSNLSITEIDSQEISQTINKRTENRHIDLPFKIETRNSFKNEINGRRVSDNKFIHDKDYENVVTVKIERQDDDFAEAEAFCDDDDDDNKLNAVMSKDRRRLSDDFNESDDEPLGTIKKKTETLKKRKGRPKKTDKREATKKVKEVKKRRRKKEKYGVVNNARIQKKLQQLNVPSGQLEMVILSWKEVGEERQQTLTSPSFTRLQYKCYECVIGFSHKSKLDNHRKKHEPSAGPMECEVCGVRCGHSSAALAAHLRRHRVRWRCILCGGSWSRADVAADHSARAHGAPAPTHTCTLCGAVETTLGKLRRHLKVHAERQKCELCGKTFSDRTSLRTHLFIHKGEKEFACPRCDKKFLFKKAMEIHLVTHDQSANLYCHECDLNFKNKMSYYQHIKYNLKHIDPAKLKYACELCDKKFAKASRLHEHNLGVHLKITPFHCTIDDCDVSYSSRPALRTHVRMCHRAARALRNHVCDKCGKAYSTKKVLEGHIRTHTGERPFKCVHCPSTFGYEAALYNHNKLVHLKIKNRRTTEQPNPVPPIPNPVPVVPNNISVVPNNVSVVPNNAPSIPNMPEASTGWQLTLNIANEAQDHTNIDIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01083737;
90% Identity: -
80% Identity: -