Basic Information

Insect: Achlya flavicornis
Gene Symbol: -
Assembly: GCA_947623365.1
Location: OX392494.1:6494394-6499199[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00026 0.016 15.9 0.7 1 23 263 285 263 285 0.97

2 10 1.1 68 4.6 0.1 3 23 309 330 307 330 0.92

3 10 0.00019 0.012 16.3 1.7 2 23 352 373 351 373 0.95

4 10 0.055 3.5 8.6 1.7 2 23 378 399 377 399 0.96

5 10 9e-05 0.0058 17.4 2.7 1 23 406 429 406 429 0.95

6 10 0.38 24 6.0 0.6 1 23 435 458 435 458 0.91

7 10 0.00024 0.016 16.0 2.6 1 23 464 487 464 487 0.97

8 10 0.00012 0.0075 17.0 1.6 1 23 493 515 493 515 0.98

9 10 4.5e-07 2.9e-05 24.6 0.7 1 23 521 543 521 543 0.98

10 10 6.1e-07 3.9e-05 24.2 0.9 1 23 549 572 549 572 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00026	0.016	15.9	0.7	1	23	263	285	263	285	0.97
2	10	1.1	68	4.6	0.1	3	23	309	330	307	330	0.92
3	10	0.00019	0.012	16.3	1.7	2	23	352	373	351	373	0.95
4	10	0.055	3.5	8.6	1.7	2	23	378	399	377	399	0.96
5	10	9e-05	0.0058	17.4	2.7	1	23	406	429	406	429	0.95
6	10	0.38	24	6.0	0.6	1	23	435	458	435	458	0.91
7	10	0.00024	0.016	16.0	2.6	1	23	464	487	464	487	0.97
8	10	0.00012	0.0075	17.0	1.6	1	23	493	515	493	515	0.98
9	10	4.5e-07	2.9e-05	24.6	0.7	1	23	521	543	521	543	0.98
10	10	6.1e-07	3.9e-05	24.2	0.9	1	23	549	572	549	572	0.98

Sequence Information

Coding Sequence: ATGACTACCAATAAGCGCAAGGGCCCTTTAATAGACCCAGGACTATGTCGATGTTGTGGCTCGACGAAAAAATGCCGCCTTTTGAATGTAGAATACGATTGTCTTGGTCATAAAGAAATCTATTCCGATATGTTTTTTGACTGTTTTGGATTGTTATTATCTAATTTAGACGGTGAGCCAGAGGACCGTCTTATATGTGCTACGTGCGTGAGTCGGCTGCGCGATTCCGCCGCCTTCCGCCGACAGGTGCTGCACTGCGAGGAGAAGCTGCTAATCACCAAGATACAAACTGAAGAAGATATTAAAATGGAAGCTGTTACAGTAGAAGTGGAAGATAATGCAACTCAAGATGTTCATTATATGGATGCTTATGCTGGGATAGATAATGATGCCCCAAATGATATGAAAACAGAAGCTGTTAAAGAAGAAGTAGAACAGAATGCGACACAAAACGTTGATGAAATGGATGCTTGTGCTGGAATGGATCATGACGCAGATAGTATCAAAAGTGAACCTGTGAAAAAAGCAAAATCAAAGAAGAAATTAAAAGTAAAAGTTAAAAGAAAAATGAAAAGTAAAACTGTGAACGGAGAACTTTTAGATGGGCGGAAAAAAATACAGAGAAAATCTAAATTGACTACAAAAATAAATTACATTGAATGTGATGAACCAGCGCTCAAAATAAACCGACCAAAGTTAACAGACAAcgaacaaaaagcatttcttaataccgttacaattgtcgaaaactcatacgtttgcccattcgatacatcattcagcgactactactgtctttattgccgagaagtcttcacagatcctaataaacttcgagaccacaccataaaccatgaccctacaacctttaaagaacataccacaaacaaaaaactaccacaaattgatataatgcgaatcgactgccgtttatgtccaaaaagaatagacgatatcgaacttttcaaaaatcacctgacaaatatacacggaaaaactctattcgctgtcaataatgaattcttaaaattccgactcacgtcgaacaaccttacttgcaccgaatgcaacgtatcttttagcttctttcacgcgttaaaaaaacatatggctgagcattttgggacatgcatttgcgatgtatgcggcgctcattatttcgaagaacgtatgctaatactacaccagaagacacatcaacgggtcgaaatgaccttcccttgtaaagaatgcggaaagtcatttaaatctaaacacagccgatacctgcatatagcgagaatgcataaaaaagagccagcgtaccagtgtaataaatgcgatgatgtcttgttttcttattcattgaggtataggcacatgatagaggtacacggggagcagaggatgtttccatgcgagcattgtgaccgggcttacgacagccgcaagtctttgagggagcataataggaggttccatttgaaaattttcaaacatcagtgcgatttatgcgaaaaaaggttctatctgccatcgcggttgaaggaacatatggctacacatactggggagagaaacttccgatgtgagtactgtgggaagagctatccaaggttaagaggtctgaaagtccatatgcagtcgcatagcagcgggaagaagtatacctgtgtaatttgtaacgcatcttttactcagaatgtgaatttgaagaatcatatgaaacggcaacatcagactatggagatggaggatGGGTATCACGAGTAG
Protein Sequence: MTTNKRKGPLIDPGLCRCCGSTKKCRLLNVEYDCLGHKEIYSDMFFDCFGLLLSNLDGEPEDRLICATCVSRLRDSAAFRRQVLHCEEKLLITKIQTEEDIKMEAVTVEVEDNATQDVHYMDAYAGIDNDAPNDMKTEAVKEEVEQNATQNVDEMDACAGMDHDADSIKSEPVKKAKSKKKLKVKVKRKMKSKTVNGELLDGRKKIQRKSKLTTKINYIECDEPALKINRPKLTDNEQKAFLNTVTIVENSYVCPFDTSFSDYYCLYCREVFTDPNKLRDHTINHDPTTFKEHTTNKKLPQIDIMRIDCRLCPKRIDDIELFKNHLTNIHGKTLFAVNNEFLKFRLTSNNLTCTECNVSFSFFHALKKHMAEHFGTCICDVCGAHYFEERMLILHQKTHQRVEMTFPCKECGKSFKSKHSRYLHIARMHKKEPAYQCNKCDDVLFSYSLRYRHMIEVHGEQRMFPCEHCDRAYDSRKSLREHNRRFHLKIFKHQCDLCEKRFYLPSRLKEHMATHTGERNFRCEYCGKSYPRLRGLKVHMQSHSSGKKYTCVICNASFTQNVNLKNHMKRQHQTMEMEDGYHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01416213;
90% Identity: iTF_01252091;
80% Identity: -