Basic Information

Insect: Achlya flavicornis
Gene Symbol: -
Assembly: GCA_947623365.1
Location: OX392482.1:9652506-9663423[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.011 0.71 10.8 3.9 3 23 465 486 463 486 0.93

2 10 1.6e-06 0.00011 22.8 2.2 2 23 500 521 499 521 0.97

3 10 0.035 2.3 9.2 1.9 1 23 534 556 534 556 0.99

4 10 2.5e-05 0.0016 19.1 0.1 1 23 569 591 569 591 0.99

5 10 6.7e-05 0.0043 17.8 2.5 3 21 599 617 597 619 0.93

6 10 0.08 5.1 8.1 3.1 1 23 625 647 625 647 0.98

7 10 4.8e-05 0.0031 18.2 1.5 1 23 659 681 659 681 0.98

8 10 8e-05 0.0051 17.5 1.7 1 23 687 709 687 709 0.97

9 10 4.8e-05 0.0031 18.2 3.5 1 23 715 737 715 737 0.98

10 10 2e-05 0.0013 19.4 2.4 1 22 743 764 743 764 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.011	0.71	10.8	3.9	3	23	465	486	463	486	0.93
2	10	1.6e-06	0.00011	22.8	2.2	2	23	500	521	499	521	0.97
3	10	0.035	2.3	9.2	1.9	1	23	534	556	534	556	0.99
4	10	2.5e-05	0.0016	19.1	0.1	1	23	569	591	569	591	0.99
5	10	6.7e-05	0.0043	17.8	2.5	3	21	599	617	597	619	0.93
6	10	0.08	5.1	8.1	3.1	1	23	625	647	625	647	0.98
7	10	4.8e-05	0.0031	18.2	1.5	1	23	659	681	659	681	0.98
8	10	8e-05	0.0051	17.5	1.7	1	23	687	709	687	709	0.97
9	10	4.8e-05	0.0031	18.2	3.5	1	23	715	737	715	737	0.98
10	10	2e-05	0.0013	19.4	2.4	1	22	743	764	743	764	0.95

Sequence Information

Coding Sequence: ATGGAAGGATTTTGTAGAGGTTGTTTGATTAAATTCGATGATCCAACTGAGTTGTTACAGTACACAGAAAAAAATAGAAGGCTGTTTGTTTATTCTACCGGCTTGCAGGTGAAACGTAATGATTCATTCACATTCCTACTGTGCAAAGAGTGTTATTTAAACATGAAGTCGTCCTGCAAGTTCAAGAAACAATGTAGGAGCTCAGACAAGAGGTTCAAAAATTATCTAGCATTAAAAGACATTGGAGATAATATAGATTTCTGTACATTTCTCAAGAATAATGATGATACTTTAGCATTCCGACTACCAATGATGAGTGGCAACAGTACACCAGCAAATCAAAAATGTAGAGATGATGACAATGAATCCACATGCACTAGCATCCGCAACTTCATGTCCGATATACTACAAGGCGAAGAAGTACCCGACACAGAAGCGCGGATCATCCGTGAAGTAATAGAAGAAGAGGCGGATTTGTTGGATGACTCACTCGACTCGCACTGGCTCCAAGAAGATATTTCTATTGATACTGACTTTCGATTGGATTTGAGCTTTAGCCCATTCTCGACACCCCGTTCTGTAAATAACGACCATTGCTATACTCCAAAGAAAGTATTTGATCCTAGGGAGCAATATGAACAACTAAATTATATCACCTCAAAGAAAATACTAGAAAATACTGGTGACATTATAAATAAAGATGAAGAAGAAGTAGTTGATGAAGAAGGAGCAGTAAATGAACTATTATCTAATGAAAATGTCGCCAATCATACAGAATATGAAAACGGAATAACTATTGACAACAATGATAAAATAAACAATAGAGATCTAAAAAATGATGGTGATTTAATAGAATATGTAGATCTTATAGATAGTAGAGAATTAGATGGGAAAAATGCACTGAATTATTATATTGAAGATATTGCATACATAGACCAAACTGAATATAATAATGATATTAATAGTAAAGGAAATGTAAAACAGAATGATTTATGCTCTATAGACAAAAATTTAGAAGAAGCATTAAAGAATGAAACAAATAAAGCAGTTGCTTTGGATGAATTGCTTCTTTCGCCACCAGTGTTTTCAAATGTTACAGCAATATCTACACCAACTATAACTAATATATTATTCGGTGATAAAGTAGATATTGATGGTGGAAACAGTATAGCGGGGCGAAATATAGAACAGTATGATAATGTAGAAGGTGATGTTGACATATTAGAAGATTTCTTTAAAAATGACACAGCGGAGTTCAATGAAGATGATGCCAACAAAAACGAATCAGCAGACTTTATTGACAAAAATGAAATTGATAAAACAGAACTTATTGACAAGGATGAAATAGATACAACAGAACATATAGAGATATATGACCTAGATACACTGTTTTGCCGAGCATGCAAAAAACAGTTCAAAAATGCACATATGTTAAAGAAGCACTTAACAAGGGAACATCAAATCACTCTGAAAAAATCTAATAAGTATAGTACTAAAGTATGTGGTGAATGTGGAAAGACCTTTTCTGGAAGGGCAAATTTTCATAGGCATATGAAAACTCACATGGAAAAACCACAGAAACCTAATGAGATTGAGATATTTAAATGCGATCATTGCCCAATTGAGTGTGAATCCTTGGTAATATTAAATATGCACATGAAAACACACACAGGGGTTTACGTCAGAAAAGACACTGGCAGGAGTTACGTTTGCCCCATTTGTAATGCAGTAAGCAATACTCCTGGTAACTTTAAGTTACATCAGAGGAGACATTCAAAGAGTTACAGTCTCTTTTGTAACGAATGTGGCAAAGGATTTTATAGAGCCTCTGACTTGAAGAAGCATGTGAAGTGTCATAATGACTTGGGTCCTTTTATATGTAAACATTGCTCTCTCGAGTGTGCTACTTTGGCGAGATTGAATTTGCACCTTAAATCGCACGGGGGGATCGACGATAAAGAATCTTCCACAAGATTTGTTTGTTATATCTGTGGTGCAAAAAGCACTACTCTTAGTAACTTCAACAGACATCAGAAGAGACATACAAAGAGCTATACTCATAATTGTGGGGAGTGTGCCAAAGGATTTTACAGTTCCTTTGATTTGAATAACCATATGAGGAGCCATACCGGTGAGCGTCCATTCAAATGCGAACATTGCGACCAGAGTTTTTCGCTTCGCTATAGCCTTGTCAATCATTTAAAACAACATGTTGAAGATAGACGGTTCCACTGCGATTACTGCAAGAAAAGTTTTGTGAGGAAACCAACTTTAGTAAAGCATATGAAAAGATCTAAATTATGCTACGAGGGCAGGACAAAGGAATATTCGCCGAATAGTGAAGAATATAATGTCGAATATTTGGATGAAGCAGATTGTGAATTTTTGGATGAAGTAGAGGCTGACAATGGCGGTCAATATTTGGACCAAATTGAAGAAGAAAATGATAATCAGTATTTGCACCAAACTGAGGATGTAACTAATGGTCAATATTTGGTCCAGAGTTAA
Protein Sequence: MEGFCRGCLIKFDDPTELLQYTEKNRRLFVYSTGLQVKRNDSFTFLLCKECYLNMKSSCKFKKQCRSSDKRFKNYLALKDIGDNIDFCTFLKNNDDTLAFRLPMMSGNSTPANQKCRDDDNESTCTSIRNFMSDILQGEEVPDTEARIIREVIEEEADLLDDSLDSHWLQEDISIDTDFRLDLSFSPFSTPRSVNNDHCYTPKKVFDPREQYEQLNYITSKKILENTGDIINKDEEEVVDEEGAVNELLSNENVANHTEYENGITIDNNDKINNRDLKNDGDLIEYVDLIDSRELDGKNALNYYIEDIAYIDQTEYNNDINSKGNVKQNDLCSIDKNLEEALKNETNKAVALDELLLSPPVFSNVTAISTPTITNILFGDKVDIDGGNSIAGRNIEQYDNVEGDVDILEDFFKNDTAEFNEDDANKNESADFIDKNEIDKTELIDKDEIDTTEHIEIYDLDTLFCRACKKQFKNAHMLKKHLTREHQITLKKSNKYSTKVCGECGKTFSGRANFHRHMKTHMEKPQKPNEIEIFKCDHCPIECESLVILNMHMKTHTGVYVRKDTGRSYVCPICNAVSNTPGNFKLHQRRHSKSYSLFCNECGKGFYRASDLKKHVKCHNDLGPFICKHCSLECATLARLNLHLKSHGGIDDKESSTRFVCYICGAKSTTLSNFNRHQKRHTKSYTHNCGECAKGFYSSFDLNNHMRSHTGERPFKCEHCDQSFSLRYSLVNHLKQHVEDRRFHCDYCKKSFVRKPTLVKHMKRSKLCYEGRTKEYSPNSEEYNVEYLDEADCEFLDEVEADNGGQYLDQIEEENDNQYLHQTEDVTNGQYLVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01252078;
90% Identity: -
80% Identity: -