Afla014011.1
Basic Information
- Insect
- Achlya flavicornis
- Gene Symbol
- ZBTB41
- Assembly
- GCA_947623365.1
- Location
- OX392492.1:8368091-8374630[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.012 0.76 10.7 0.6 1 23 159 181 159 181 0.95 2 11 4.5e-05 0.0029 18.3 1.5 1 23 201 223 201 223 0.99 3 11 0.00012 0.0076 17.0 0.2 1 23 229 251 229 251 0.97 4 11 0.0008 0.052 14.4 0.3 3 23 258 279 257 279 0.97 5 11 0.0097 0.63 11.0 2.4 1 23 287 309 287 309 0.93 6 11 0.0062 0.4 11.6 0.7 1 23 315 338 315 338 0.96 7 11 0.001 0.065 14.1 5.0 1 23 347 369 347 369 0.99 8 11 0.00012 0.0075 17.0 1.0 1 23 375 397 375 397 0.94 9 11 1.7e-06 0.00011 22.8 3.8 1 23 403 425 403 425 0.99 10 11 5.6e-06 0.00036 21.1 7.0 1 23 431 454 431 454 0.97 11 11 0.00039 0.025 15.3 1.2 2 21 459 478 458 479 0.95
Sequence Information
- Coding Sequence
- ATGCATAAATTGTGTAAAGACAGTGAGATTTTGTGTAAAATATATTCCTGTTTTTCGGTTAAGATAACACTCAACAATAGCTTTCCAAGCAACATTTGTGATATATGTCTTAACAAAATAAATCAAACACATGACTTCCATAAAATAGTTTTAGAAAATGAAGCAAAACTTTTACGTTATTTAGAAAACGGAGATTGTTTACATAATTTGTATGAAATTATAAAAAATGGTAACAAAATCAAAGAGGAAAAAGAAATTTTGCATGAAACATTGAATATAAAAAATAATACTATACATGAAGAATTAGACGTAAATATAAGTGAAAGTTACAGTTCTGATGAAGAAATAACTTTATCATCACTAAAAAAAGAAAAAGATACCGCTGTACAGCCAAAAGTAAAGTTAAAAACCGATGAGTTGAAATATCCACTAAAGCAAGAACTAAATGATATCAAAACTACAGATGCAACACAATTTAACTGCCTAACATGTTTTGCCATATTCGAGACACAAAATGACCTGATAAAACATTATTCGGAACATAACAGTAAGAAAAATGATGATGAATACGCAATAGAATCATCAAATGATAAAATAAGCTATAAATGTAAGAAATGTGATAAAGTTTATGAGAAAAAGAAGCTGATTGAAAGACATGTGATTACTCATCAGCATGATCGGCCATTTATTTGTAATTATTGTGGCAGAACGTACAAGACAGTAGCAGAAATAGTACGTCACGGGAGAGTCCACAATGGATATAAGCTACTCTGTCCACAGAACTGTGGCTACAGCACGGTGTATAGAGGGTCCCTGAAAGAACACATTAAGAGACACAGTGATAAATTAGAATATAAATACTCGTGTGACAAGTGCGGGAAGCGGTTCAACGTGAAGACCTGGCACGACCAGCACCAGAATGTACACTCCGGACTGAAGCCCTTTGTCTGCGATATATGTGGACTTGCCTTTCATATGGACAGATATCTGACGTCTCACCGAAGCTCGGTGCACCCGCAGTCGTCAAGCGTGAAACGCTACGTGTGCACACACTGCCATCTACCGTGCGACTCTCGCAACACTCTTACTGTGCACATGGAGACGCACGGAATAAAGGCGAGTTTCCTGTGCGACACTTGCGGCAAAGTGCTATCGAGCGCTGAACAGCTGAAACATCATAAAAGTGTTCATTTGGGCATCAAACCTTATAGTTGCAGTGTCTGTTCTAAATCTTTCACGAAAAAGTTTAATTTGAAGACTCACGAGCGCACGCACACCGGCGAGCGCGCTCACGTGTGCAATAAGTGCGGAAAGTGCTACACGCAAAGAAGCACCTTATTGCGACATTATAGAAGAAGTCACGCCGTATCCCAAAAATGCTCCAAGTGCAACAAGAGTTTCGCTTCACGCAACCAAATGGTCACCCATCAGAAGTTGTGCTTATGA
- Protein Sequence
- MHKLCKDSEILCKIYSCFSVKITLNNSFPSNICDICLNKINQTHDFHKIVLENEAKLLRYLENGDCLHNLYEIIKNGNKIKEEKEILHETLNIKNNTIHEELDVNISESYSSDEEITLSSLKKEKDTAVQPKVKLKTDELKYPLKQELNDIKTTDATQFNCLTCFAIFETQNDLIKHYSEHNSKKNDDEYAIESSNDKISYKCKKCDKVYEKKKLIERHVITHQHDRPFICNYCGRTYKTVAEIVRHGRVHNGYKLLCPQNCGYSTVYRGSLKEHIKRHSDKLEYKYSCDKCGKRFNVKTWHDQHQNVHSGLKPFVCDICGLAFHMDRYLTSHRSSVHPQSSSVKRYVCTHCHLPCDSRNTLTVHMETHGIKASFLCDTCGKVLSSAEQLKHHKSVHLGIKPYSCSVCSKSFTKKFNLKTHERTHTGERAHVCNKCGKCYTQRSTLLRHYRRSHAVSQKCSKCNKSFASRNQMVTHQKLCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01416116;
- 90% Identity
- iTF_01252068;
- 80% Identity
- -