Afla003446.1
Basic Information
- Insect
- Achlya flavicornis
- Gene Symbol
- -
- Assembly
- GCA_947623365.1
- Location
- OX392496.1:7131239-7154232[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.094 6 7.9 0.5 1 23 454 476 454 476 0.96 2 23 1.3 85 4.2 4.4 1 23 483 505 483 505 0.96 3 23 1.6 1e+02 4.0 4.9 1 23 509 531 509 531 0.97 4 23 0.00015 0.0094 16.7 3.5 1 23 536 559 536 559 0.97 5 23 5.7 3.6e+02 2.3 0.1 2 23 567 589 566 589 0.82 6 23 8.6 5.5e+02 1.7 2.4 3 20 599 616 597 618 0.92 7 23 0.11 6.9 7.7 0.1 2 19 628 645 627 647 0.93 8 23 0.0038 0.25 12.2 2.9 1 23 656 678 656 678 0.97 9 23 0.013 0.85 10.5 0.0 3 23 708 729 706 729 0.94 10 23 9.6e-06 0.00062 20.4 1.5 2 23 736 757 735 757 0.96 11 23 0.00034 0.022 15.5 0.4 1 19 763 781 763 784 0.96 12 23 0.23 15 6.7 1.1 1 23 1197 1219 1197 1219 0.95 13 23 0.69 44 5.1 6.8 1 23 1226 1248 1226 1248 0.97 14 23 2.9 1.9e+02 3.2 3.9 1 23 1252 1274 1252 1274 0.95 15 23 0.0047 0.3 12.0 1.9 1 23 1279 1302 1279 1302 0.97 16 23 1.1 69 4.5 0.2 2 23 1310 1332 1309 1332 0.82 17 23 6.7 4.3e+02 2.0 3.3 2 20 1341 1359 1340 1361 0.90 18 23 0.17 11 7.0 0.1 2 19 1371 1388 1370 1390 0.93 19 23 0.17 11 7.1 6.0 1 21 1400 1420 1400 1422 0.94 20 23 4.2e-05 0.0027 18.4 0.3 3 23 1455 1476 1454 1476 0.96 21 23 7e-06 0.00045 20.8 1.0 1 23 1482 1504 1482 1504 0.99 22 23 6.7e-06 0.00043 20.9 0.5 1 23 1510 1532 1510 1532 0.95 23 23 2e-05 0.0013 19.4 2.2 1 23 1538 1561 1538 1561 0.97
Sequence Information
- Coding Sequence
- ATGGCTCTAGCAAATAATTATGTAAACAAGTGCAAAACATCCTCGTTGCGAGTGTGTCGAGGATGTCTCGCTACAGATGCACGACTGTACGACATGCGCCAGAACCGACTGCTGGAGGCCTATTCCACATTACTGAGTACCGCTGTACAAGTAACAGATGACCTGCCACATTACTTATGCAGCTACTGTGCTGTACTGCTGCTCAAGTGCGACTCATTCAGAATGAAGTGCATAGATTCACTAATAATACTTAGAAATGCTCAACACCAGCATTTAGATGTTGCTACAGAACAAATTAAAAAATTAGGCAAATCTAAGTACTTAAAGAAAATTATTTATAACAATATAAATATAGTTGATAAAACTCTTACACGCAAGTCTTCTGATCTATCTAAAGACACTAATATATCTTCAGATTCTGATATGTCTTCAGATTCTGACGAATCTTTAGATTATGATTTAAGAGAAAAAATGTATTGTTCAGTTAGTGAAAATAAAAATAAACTTAATTTAAAATCCAAATCAAATTTTGGGAAACATAAAATTATTGACAATGAACATGACTATGCTGCAAATAATTTTAAAAATGAACTTCAAAGCCTACTAAAGCAGTACTCTGATAATGAAAAAAGTGGATTATTAAAAGACTTTAAGATTAACTTAGATTGTGAAGCAAGTAAAGCTATAAGTAACATAAGAGACCATCATATGCATAAGTTGTCAGAAATTATTAATCATATCCAGTATTCTAGTGAGAAAAGTACTGAATTACTAAAGATTTTAGATGAAGATAAACCAAATTGTATTAATAATCTCTCAAAATCTGTAGCTACCATTAAAAAAAGTAACGTTATAAAACAAGAATCCAATAACGCAGAAGCTAAAACTATAAATAAACAGGAGGTAGTTCAAACAGGTAATGATCATGAACAAAATGACATAGTACAAGAGAATACAAATATATCAATATTAGTAAATCATTTCAATATTAAACCAATCATCAAGGATTTTGTTAAAACAGATGAAGTAAAATTTAAAGTATCAGATGAAGTAAAGTTAGAAGTATCACAAGATGAAACAAAAGACTTTGAAAACCATTTTGATGAAATAAACGAAAGTTTAGACTCAGAAGACGAAATTGCTATCGCAGACTTAAAACTGGATAAACAAATAGGTGCAAATTATAGAGGTTGTAAAAATATCATCAATGGAATATTAAAAGGACGAGAAACAAGGAAATGGTTAACTGAAGAGATCTATTCAATGAGATATAACACAGACGTAAGACACCTAAGTAACGAAGAACAAATAAACGAATTTAATAAAAGAAAGGAGTCTGGGAGTTATAAAAATGGACTGTTCAAATGCAACATTTGTTTCAAAGGATTCCTTGCTGAAGATGCTTATAAGAATCACATGTCGCTACATGATGAAGTCAGCGGCAAGTTCGTGTGTGACATCTGTCAGTGTCACTTCATGACTGAAAACAAGCTCTTCGGACACAAAAAAGGTCACAATAGACTATTTACTTGCAGAGAATGCGGTCACACAACGTGTCATGCTGCTCTAGCATCTCAGCATTATAAATGGCATGGTGGAAAGAAATTCACCTGCAAGGATTGTGGAAAAGAATTCAAAAAAAAATCAACTAAATACACACACATTAAGATGAGCCACCCGACCAGTGAACAGCTGGTGCGTTGTGAGATCTGTGGAGACTCTTTCAATGGACTCGTTGGACTCAAATTTCATGAGAATAGGTCACACAAAGAGATGTTTTCACCGGAGTGTCTATGTTCTGGTTGCGACACTCAGTTCTACTGCTCGGACGCGTTTAAGGCGCATCAAGGAACCGACGGACTGTGCGACACGCTACACAAGTATTGTGTGCGCTGCGGTATGTCATTTGAGACTGAAGAACTGTTGAAGGAACATGAGATAGAGCAACGGAAACCACGTGAAGATTTCGATTGCGAAGTGTGCCATGAGAAATTCAAATTATTCTGGAAATTAAAAGTCCACCAGAGAAGTCACGCCACCACGTATCCTAATTATATAAAATTGTATAACGCAAGATGTTCTGCGAGAAAAAAAGAGAAAAACGGGAATGAACCTATGATATGTGAGGTGTGCGGGAAGTCAATTCAGAATGCTGGTCTGCTTAAAGTACATTACAGTGTGGCGCATTCAAGTGTCAAGCCATGTAAATGTACCGTCTGTTCTAAAGCATTCAAAACACCTGCTATGTTGAGGGCACATACGAGAGTTCACACGGGAGAGCGCCCGTACCAATGCCAGAATTGTTCAAAGGCGTTCCAGACCTTAACAAACCTTAAACGGCATAACATTGTACAAGTAACAGATGACCTGCCACTTTTCTTATGCAGCTACTGCGCTGTACTCCTGCTCAAGTGTGACACATTCAGAATTAAGTGCATAGATTCACAAATAGTGCTGAGAAATGCCCAACACCAACATTTAGATATTGCTACAGAACAAATAAAAAATGTAGGCCAATCTAAGTACTTAAAAAAATTTATATATAACAATATAAATATACGTGATAAAACTCCTAAACGCAACCATTCTTTTATATCTACAGACACTGATATATCTACAGACACTGATATATCTACAGATACTGATATATCTTTAGATTTTGATATATCATCAGATTCTGATGAATCTTTAGATTATGATTTAAGAGAAAAAACTGATTGTTCAGCTAGAGAAAATGTAAAAAAACATTATTTAGAACCCAAATCTAATTTTAGAATACGAAAAATTATAGATAAGGAACATGACTATGCAAATAATTCTTGCAATGAAATGAAAAACCCACTAAAGACCTACATTGATAATGAAAGAAAGGAATTATTAAAAGACTTTAAGGTTAACTTAGATTGTGAAGCCAGTAAAGCTATAAGTAACATAAGAGTTCACCATATGCATCAGTTGTCAAAAATCATTAATCATATTCAGTTTTCTAGTGAGAGAAGTACGGAATTACTAAAGATTTTAGATGATAATACACCAGATTGTAAAAACAGTGCATCAAAATCTGTAGTCATTAAAAAAAGTAATGTTATAAAACAAGAATCCAATTCTAATGCAAAAGCTAAAACTATAAATAAACAGGAGTTAGATCTAACAGGTAAAGAAGATGAACAAAAGGCCATGGTACAAGAGAATGCAAATACACCAATATTAGAAAGTCATATTGATATTAAAGCAAACATCAAGGATGTTATTAAAACAGATGAATTATTAGAAGTATCACAAGATGAAACAAACGAAATTGAATACCAATTTGATGAAATAAACGAAACCTTAGACTCAGAAGACGTCATTGCTACTGCAGACTTAAAACTGGATTCTCAGCCATCGAAATATAAACAAATAGGAGCAAATTATAAAGGCTCTAAAAGAATCATGAATAAAATATTAAAAGCACAAGACACAAAGCAAACGGTAACCCAAAAAAATATCTTTGGAATGTATAACACAGAGGTTAGACACCTTAGTAAAGAAGAACAAATAAATGAAATTAATAAACGAAAGGAGTCAACTAATTATATAAATGGACAGTTCAAATGCAACATTTGCTTCAAAGGATTCCTTATTGAAGAAACATATAAGAATCACATGTCGTTACATGATGACATCAGCGGCAAGTTCGTGTGTGACATCTGTCAGTGTCACTTCACGACTAAGAAGAGGTTCGTCGGACACAAAAAAAGTCACGATAAACTATATATTTGCAGAGAATGCGGCCATACAACGCGCCATTGTGCTGATGCAATCGAGCATTTTAAATGGCACACTGGAAAGAAATTCCCCTGCGAGTTTTGTGGAAAAGAATTTATGAAAAAGTCAACTAAATACACACACATTAAGATGAGCCACCGGACCAGTTTACATTTGATACGTTGCGAGATCTGTGGAGGCTCGTTCAGTGGACTCCGTGGACTCAAATTTCACGAAAGTAGGCTTCATAAAGAGATGAATTCCCCGGAGTGTCGTTGTTCCGGTTGCGACACTCAGTTCTACTGCTCGGACGCGTTTAAGGCGCATCGAGGAACCGACGGACTGTGCGACACGCTACACAAGTATTGTGTCCGCTGCGGTATGTCGTTTGAGACTGAACAACTGCTGAAGGAACATGAGATAGAGCAACGGAAACCACGTTATAATGACTTTGATTGCGAAGTGTGCCATAAGAAATTCAAATTATTCTGGAGTTTAAAATTGCACCAGAGATGTCACCTCGACACGCATCCTAATTCTAAATTGGGTAACGCTAAGAAGGTAACGGTAAGAAGATCTTGTAGAGCAAATAAGAAATACTGGATTGAAGCTATATGTGAGGTGTGCGGGAAGTTTTTTAAGAACTCTGGTCTACTTAAACTACATTACAATGTGATGCATTCAAATGAAAAGCCATATAAATGTACCATCTGTTCTAAAGCGTTCAAAACATCTGCGGTGTTGAAGGTACATACGAGATCACACACGGGAGAGTGCCCGTTCCAATGTCAGAGTTGCCCAAAAGCGTTCTCGAACAAAGCAAACCTTAGAAGACATAACGCTGTACACACAGGGGAGCGTCCACACACGTGCAATATCTGCGGGAAGAGCTTCCAAACATCAACCAGCGTCAAAATGCACATAAAAACAGTACACATGAAAATACCCATGCCGCCGAGGGTTCGCAATAGGAAGAAGAAAATTTAA
- Protein Sequence
- MALANNYVNKCKTSSLRVCRGCLATDARLYDMRQNRLLEAYSTLLSTAVQVTDDLPHYLCSYCAVLLLKCDSFRMKCIDSLIILRNAQHQHLDVATEQIKKLGKSKYLKKIIYNNINIVDKTLTRKSSDLSKDTNISSDSDMSSDSDESLDYDLREKMYCSVSENKNKLNLKSKSNFGKHKIIDNEHDYAANNFKNELQSLLKQYSDNEKSGLLKDFKINLDCEASKAISNIRDHHMHKLSEIINHIQYSSEKSTELLKILDEDKPNCINNLSKSVATIKKSNVIKQESNNAEAKTINKQEVVQTGNDHEQNDIVQENTNISILVNHFNIKPIIKDFVKTDEVKFKVSDEVKLEVSQDETKDFENHFDEINESLDSEDEIAIADLKLDKQIGANYRGCKNIINGILKGRETRKWLTEEIYSMRYNTDVRHLSNEEQINEFNKRKESGSYKNGLFKCNICFKGFLAEDAYKNHMSLHDEVSGKFVCDICQCHFMTENKLFGHKKGHNRLFTCRECGHTTCHAALASQHYKWHGGKKFTCKDCGKEFKKKSTKYTHIKMSHPTSEQLVRCEICGDSFNGLVGLKFHENRSHKEMFSPECLCSGCDTQFYCSDAFKAHQGTDGLCDTLHKYCVRCGMSFETEELLKEHEIEQRKPREDFDCEVCHEKFKLFWKLKVHQRSHATTYPNYIKLYNARCSARKKEKNGNEPMICEVCGKSIQNAGLLKVHYSVAHSSVKPCKCTVCSKAFKTPAMLRAHTRVHTGERPYQCQNCSKAFQTLTNLKRHNIVQVTDDLPLFLCSYCAVLLLKCDTFRIKCIDSQIVLRNAQHQHLDIATEQIKNVGQSKYLKKFIYNNINIRDKTPKRNHSFISTDTDISTDTDISTDTDISLDFDISSDSDESLDYDLREKTDCSARENVKKHYLEPKSNFRIRKIIDKEHDYANNSCNEMKNPLKTYIDNERKELLKDFKVNLDCEASKAISNIRVHHMHQLSKIINHIQFSSERSTELLKILDDNTPDCKNSASKSVVIKKSNVIKQESNSNAKAKTINKQELDLTGKEDEQKAMVQENANTPILESHIDIKANIKDVIKTDELLEVSQDETNEIEYQFDEINETLDSEDVIATADLKLDSQPSKYKQIGANYKGSKRIMNKILKAQDTKQTVTQKNIFGMYNTEVRHLSKEEQINEINKRKESTNYINGQFKCNICFKGFLIEETYKNHMSLHDDISGKFVCDICQCHFTTKKRFVGHKKSHDKLYICRECGHTTRHCADAIEHFKWHTGKKFPCEFCGKEFMKKSTKYTHIKMSHRTSLHLIRCEICGGSFSGLRGLKFHESRLHKEMNSPECRCSGCDTQFYCSDAFKAHRGTDGLCDTLHKYCVRCGMSFETEQLLKEHEIEQRKPRYNDFDCEVCHKKFKLFWSLKLHQRCHLDTHPNSKLGNAKKVTVRRSCRANKKYWIEAICEVCGKFFKNSGLLKLHYNVMHSNEKPYKCTICSKAFKTSAVLKVHTRSHTGECPFQCQSCPKAFSNKANLRRHNAVHTGERPHTCNICGKSFQTSTSVKMHIKTVHMKIPMPPRVRNRKKKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -