Basic Information

Insect: Achlya flavicornis
Gene Symbol: -
Assembly: GCA_947623365.1
Location: OX392495.1:1463796-1465406[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2 76 4.4 1.9 2 23 218 240 215 240 0.87

2 10 8.2e-05 0.0053 17.5 0.5 1 23 246 268 246 268 0.99

3 10 3.5e-05 0.0022 18.7 5.7 1 23 274 297 274 297 0.96

4 10 0.0015 0.096 13.5 0.1 2 20 304 322 303 324 0.93

5 10 7.4e-06 0.00047 20.8 3.6 2 23 344 365 343 365 0.96

6 10 9.2e-07 5.9e-05 23.6 3.2 1 23 372 394 372 394 0.98

7 10 1.3e-05 0.00083 20.0 0.2 1 23 400 422 400 422 0.98

8 10 6.9e-06 0.00045 20.9 2.1 1 23 428 450 428 450 0.96

9 10 1.7e-05 0.0011 19.6 3.2 1 23 456 478 456 478 0.98

10 10 0.00075 0.048 14.5 3.2 1 23 484 507 484 507 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2	76	4.4	1.9	2	23	218	240	215	240	0.87
2	10	8.2e-05	0.0053	17.5	0.5	1	23	246	268	246	268	0.99
3	10	3.5e-05	0.0022	18.7	5.7	1	23	274	297	274	297	0.96
4	10	0.0015	0.096	13.5	0.1	2	20	304	322	303	324	0.93
5	10	7.4e-06	0.00047	20.8	3.6	2	23	344	365	343	365	0.96
6	10	9.2e-07	5.9e-05	23.6	3.2	1	23	372	394	372	394	0.98
7	10	1.3e-05	0.00083	20.0	0.2	1	23	400	422	400	422	0.98
8	10	6.9e-06	0.00045	20.9	2.1	1	23	428	450	428	450	0.96
9	10	1.7e-05	0.0011	19.6	3.2	1	23	456	478	456	478	0.98
10	10	0.00075	0.048	14.5	3.2	1	23	484	507	484	507	0.94

Sequence Information

Coding Sequence: ATGTCTGATGAAGAAGAGACTTATTGCCGCCTCTGCGCTGAGCCGACACCAATAACTCAGCTAATAACATCAGAGGAGGACGTCGCCATAACATCGAAAATAACAACCAAAATGTCCTGGATAAATATTGATATTTCACCTACTAATACACTTCCAACTACTATTTGCTTTTCATGTTTCGACTTATTAGAACGTACGTGGTCGTTTTTACACAATGTGCGAACCGCCCAAGTGAAGTTAAAGGAGATTTTCATGAAGAAAGATGATGAAGACAATTCGGCGTCTACGAAGGATGAGAAGTCAGACAATGCGCCGGATGCCCTCCAGCCTGTTGATAAAGACTGGGAAGATTTCCAAACAAAGACTGAGGTGAAGAGTGAGGTTCAGGTATCGGATACTGAAGATGTTCAGATCGTTACAGTAGACCCTAAATCCTTAGTAGAATTTGATTATAACATAATTAAAACTGAAAATCATAGTGACTTTGAAATACATTCCGACGGACATAACTCCACTGACAGCGATTTGCCATTACAACAGTCTGCGAAGAAGAAAAAGCTTAAGAAAAAAAAGAGGAACGTAGAATACACTAAACTAGACAAAGGTACTGAACTGCCGGTCCCAATGCTGACTTGGGATGATTACATGTGCCGTTGCGCTACATGCGATGCACAGTGTAAAAATATTGCATCGTTACAATTACATTCACTTCAAATACATGCATGTTGCTGCATCTTTAAATGCTCAGATTGCGGTAAAATATCCGCTAATTACAAATCATTTGTAAACCACGTACGGATACATAAGAAGATACTGAGATTCTGCTGTGAATTCTGTAATAAAATGTTTAAGACTGCGTCAAAATTAAGAAAGCATTACAATATGTCCCATCGTAACATATATCTGACTATGTGTCATAGTTGTGGAGCTTCTTTTGAATCACAAGAGCTCCTTCAAGATCATATAATATTGTATACGAAAGTATATAGGAAACGGGGAGTAAAATGTGGACCAATTGAGAATGATTTGAAATGTGAGCACTGCAGCAAAGAGTTTAAATCACGGTCGAATCTACAGCAGCATAAGCTAGTCCACCTACCACGTAGCAGAGACTTTTCCTGCCACGTATGCGGTAAAATGTTCTTTACGAAAGGCACTTTGAGTACCCACATGATGACACACGAAGATGCGAAGCCTTACAAGTGTGAATACTGTCCAATGGCTTTTCGAGCCCGTGGTAACCTCCAATCACATATTAGTTTGCATTCCGGTGCAAAACCGTTTGTTTGTGAACAGTGCGGTAAAAGTTTTAGGGTTAAAAGGCACCTGAAATCACACTCAATTGTTCATACGGACTTGATGCCTTATGTTTGTGAATACTGTAACAAGACATTTAGGTTTAAGACTAGGTTAAATTTACATTTGAGGCAGCACACTGGTGCTAAGCCGTATAATTGTATTTATTGTCAACGGGACTTTACGAATGGGTCTAATTTCAAGAAACATATGAAACGGAGGCATAATATTGATACGTCAAAGAAACGGTACAATAATGTTGTGAATGAAAGTAGTTTACAGAATAGTGATGAGGTTAATTCCAGTCAAACTTAA
Protein Sequence: MSDEEETYCRLCAEPTPITQLITSEEDVAITSKITTKMSWINIDISPTNTLPTTICFSCFDLLERTWSFLHNVRTAQVKLKEIFMKKDDEDNSASTKDEKSDNAPDALQPVDKDWEDFQTKTEVKSEVQVSDTEDVQIVTVDPKSLVEFDYNIIKTENHSDFEIHSDGHNSTDSDLPLQQSAKKKKLKKKKRNVEYTKLDKGTELPVPMLTWDDYMCRCATCDAQCKNIASLQLHSLQIHACCCIFKCSDCGKISANYKSFVNHVRIHKKILRFCCEFCNKMFKTASKLRKHYNMSHRNIYLTMCHSCGASFESQELLQDHIILYTKVYRKRGVKCGPIENDLKCEHCSKEFKSRSNLQQHKLVHLPRSRDFSCHVCGKMFFTKGTLSTHMMTHEDAKPYKCEYCPMAFRARGNLQSHISLHSGAKPFVCEQCGKSFRVKRHLKSHSIVHTDLMPYVCEYCNKTFRFKTRLNLHLRQHTGAKPYNCIYCQRDFTNGSNFKKHMKRRHNIDTSKKRYNNVVNESSLQNSDEVNSSQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00761931;
90% Identity: iTF_01252056;
80% Identity: -