Basic Information

Insect: Achlya flavicornis
Gene Symbol: -
Assembly: GCA_947623365.1
Location: OX392489.1:7771152-7774465[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0067 0.43 11.5 0.2 5 23 349 367 348 367 0.97

2 12 0.013 0.84 10.6 0.2 3 23 375 395 373 395 0.94

3 12 0.14 9 7.3 0.3 2 23 403 424 402 424 0.93

4 12 2.3e-07 1.5e-05 25.5 0.8 2 23 430 451 430 451 0.98

5 12 0.00062 0.04 14.7 3.2 1 23 457 479 457 479 0.98

6 12 0.04 2.6 9.0 0.0 1 20 483 502 483 504 0.94

7 12 0.00011 0.0074 17.0 0.2 1 23 538 561 538 561 0.96

8 12 0.0024 0.15 12.9 0.1 3 23 570 590 569 590 0.99

9 12 0.00016 0.01 16.6 0.5 1 23 601 623 601 623 0.98

10 12 5.3e-05 0.0034 18.1 4.3 1 23 629 651 629 651 0.98

11 12 0.0029 0.19 12.6 0.3 3 23 659 679 657 679 0.98

12 12 8e-05 0.0052 17.5 1.0 1 23 685 708 685 708 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0067	0.43	11.5	0.2	5	23	349	367	348	367	0.97
2	12	0.013	0.84	10.6	0.2	3	23	375	395	373	395	0.94
3	12	0.14	9	7.3	0.3	2	23	403	424	402	424	0.93
4	12	2.3e-07	1.5e-05	25.5	0.8	2	23	430	451	430	451	0.98
5	12	0.00062	0.04	14.7	3.2	1	23	457	479	457	479	0.98
6	12	0.04	2.6	9.0	0.0	1	20	483	502	483	504	0.94
7	12	0.00011	0.0074	17.0	0.2	1	23	538	561	538	561	0.96
8	12	0.0024	0.15	12.9	0.1	3	23	570	590	569	590	0.99
9	12	0.00016	0.01	16.6	0.5	1	23	601	623	601	623	0.98
10	12	5.3e-05	0.0034	18.1	4.3	1	23	629	651	629	651	0.98
11	12	0.0029	0.19	12.6	0.3	3	23	659	679	657	679	0.98
12	12	8e-05	0.0052	17.5	1.0	1	23	685	708	685	708	0.96

Sequence Information

Coding Sequence: ATGGATACGTGGTCGGAACTATGCCGTTGCTGCCTATCCGCTAATTCCGAAGTGTCATTGTTAGATAATGAAAATAATGTAACTGAGAAGTTTCGTGAAGTCACAACGATCGAGGTGGACGTTGACGACGGCTTACCACAAAGGCTGTGTATAGATTGTTACACCATTATGAACTCTGCATACCAGTTCCGTAAGCAGTGCATCAAAATGGACAGTGAGTTGAAAATACAGCTAACCACACTTCTAAATCAAGCAAAAGAGAGAAGTGAAGAAATGCAAATGGATGAAGAAACAATAAATGGTTCTGATACTGATGATATAGCTAATGATCCAATGAAACAGTTAGAAGCTATCATTAAAGCTGAACCAAGCGACAGTGACGACGATTGCTACTATGTTTTAGTAATTGACGAGCCTAAAGATAAGGATAATGAGAATGAGATGACCCAACCCATTAAAATAGAAAAGATCAAAAATGAACCACCTGAACCTGTCGAGATAAGTTACCATTTAACTGAAACACAAAGCAGCCAAAATCAATATGAAGACTCTATAAATTCATTCCTTATATCTAATACAAAGGTCTCGGCTAATGTACCAGCAACTATCTTAGAAAATGAGGAAGACAGCCAACACAATGACTTGCAAGGGGTTATGGACATAGATGATACTCAAGATAGTACTTCCCAAGATAACTTAATACTACCAGAAATTGGTGAAGAAGAGGATCAAATTGTACAAACTATAAGTGGAGATGTTGTTCAAGACACAAAGAATTTTATCAAAATATTAACTACAAATGATGCAGATGGTACAATTCTACTTAAAAGTACTGATGGTATTCAATATCTGGCCCATGAAACCCAACTTGTGACAAATGATGACAATGGAGACCCTATGTCTCAGGAAGTTATCCTTTGTGAAGGTGATGACACATCACAATTCCAAATATTGAAGTATGATGGATCAGAACTTGTTATAGAATATGCCGATGATGGCCAAATAGCTACTGTATTCCAACAGGAAAATGGTATGTTTTTGTGTGATTGTGGTGAGCAATTTGAAGACTTATCCGAATATGAGAAGCATCAGTCGAAGCATAATCCTGCTGGTGAGCATCTTTGCAACTTGTGTGGCAAAGGTTTTGAATCAGCTGAGATTTTAACAGGGCATATGCTACTGCACAGCATATCAGGTTCATTAATCACATGTCCCTTCTGCAACCAAATAGTCAGACGGAATGCACTCACGCAACACATCAAGTTTGGCCACAATAATATTAAACCACGCTGCAATGTATGTTCCAAGACATTTGCCAATCCTAATAATTTGAAACGTCATATGATGATCCATAGTGGAGTGAGAGAATTTGAATGTGATATTTGTGAGAAGCGTTTCCATCAGAAGATTACTATGCAGACACACAGACTGACACATTTGAACTCATTCTCTTGTAACCAATGTGAAGACACATTTGAGAATGCAGCAGCATTGACAGCCCACAAAGAATCTGATGAATGTAGTAAATCAAAAGTGCTTAAAGTAAAGGAGGAACTGATGAAAACTGTTAAGCAAGAGGTAAGAGCAACAAATTTTGGAAAGCTCTTAGGATACGCTTGTTCCCTTTGCAAAAAAATGTTTTCTTTAGAATCGGCTCTAGAACAGCACATTGAACGCAATCACATCATAGATCCATCTGAATTATTGTGTTCCGAATGTGGTGAAATCCTACCCACTAAACAGGATATGCAGAACCACATTTTGACACATAATAAGAATTCGAAAAAAGGTATGAAGAGATTTGAATGTAGTATATGTTCGAAAGGCTGTTCTAGTCAAGCTATGTTGATAATGCATGAGAGGGTTCACACAAATGAACGCCCATATCCTTGTCAACTATGTTCTTTACGTTTTAAAACAAAAACGCACCTAAGGACGCATCAGTTAACTCATACACGGGAGAAGAAATTTGGATGTTCTGTGTGCATGAAATTCTTTGCTCTTAAAGGTAACTTAGTGGTACACTTAAGGACTCATACTGGTGAAAGACCATACATTTGCTCATTGTGCGATGAAGCATTTATAGACTCTAAGTACTTGAAGAAACATAAGTTAAAGAAACATGCTATTGACAATCTGCCATGGAACCAATATTAA
Protein Sequence: MDTWSELCRCCLSANSEVSLLDNENNVTEKFREVTTIEVDVDDGLPQRLCIDCYTIMNSAYQFRKQCIKMDSELKIQLTTLLNQAKERSEEMQMDEETINGSDTDDIANDPMKQLEAIIKAEPSDSDDDCYYVLVIDEPKDKDNENEMTQPIKIEKIKNEPPEPVEISYHLTETQSSQNQYEDSINSFLISNTKVSANVPATILENEEDSQHNDLQGVMDIDDTQDSTSQDNLILPEIGEEEDQIVQTISGDVVQDTKNFIKILTTNDADGTILLKSTDGIQYLAHETQLVTNDDNGDPMSQEVILCEGDDTSQFQILKYDGSELVIEYADDGQIATVFQQENGMFLCDCGEQFEDLSEYEKHQSKHNPAGEHLCNLCGKGFESAEILTGHMLLHSISGSLITCPFCNQIVRRNALTQHIKFGHNNIKPRCNVCSKTFANPNNLKRHMMIHSGVREFECDICEKRFHQKITMQTHRLTHLNSFSCNQCEDTFENAAALTAHKESDECSKSKVLKVKEELMKTVKQEVRATNFGKLLGYACSLCKKMFSLESALEQHIERNHIIDPSELLCSECGEILPTKQDMQNHILTHNKNSKKGMKRFECSICSKGCSSQAMLIMHERVHTNERPYPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYICSLCDEAFIDSKYLKKHKLKKHAIDNLPWNQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01083574; iTF_01252054; iTF_01417069; iTF_01416113; iTF_01437304; iTF_00761920;
90% Identity: iTF_01252054;
80% Identity: -