Basic Information

Gene Symbol
kn
Assembly
GCA_947623365.1
Location
OX392478.1:2950809-2958207[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.5e-119 3.7e-115 385.8 0.0 209 387 4 200 1 204 0.98
2 2 9.4e-07 0.0054 15.4 5.7 421 553 211 357 201 384 0.58

Sequence Information

Coding Sequence
ATGTCTCAACAGGTGGTGATATCAACGCAAGTGATGGTGGATGGACCTCTATTAGCGATATCGGACAACATGTTCGTTCACAACAACAGCAAACATGGACGTAGAGCGAAAAGGCTTGACCCTACTGAAGGTACTGACGCCGCGCCAGACACTAATTCGGGTCTGTATCCACCGTTGCCCGTAGCAACGCCGTGCATCAAGGCGATATCCCCGAGCGAAGGTTGGACTTCAGGGGGTTCAACGGTGATCATAGTAGGGGACAACTTTTTCGATGGACTACAAGTTGTTTTCGGGACTATGTTGGTTTGGAGCGAGCTAATAACATCACACGCGATAAGAGTCCAGACGCCCCCGAGACACATACCTGGCGTGGTGGAGGTGACACTATCGTATAAGAGCAAGCAGTTCTGCAAAGGTGCACCCGGAAGATTTGTTTATGTTTCAGCACTCAACGAGCCCACGATAGATTACGGCTTCCAGAGACTACAGAAACTTATACCGAGGCATCCTGGTGATCCCGAGAAATTGCCCAAGGAAATAATTCTAAAACGGGCAGCCGACCTTGCAGAAGCCTTATACTCAATGCCCAGGAACAACCAGCTCGGACTGGGAGGGCCGCGGTCGCCGCCCGGCGCCAGCATGCCTTTCAACTCTTACTCCGGCCAACTAGCTGTCAGCGTTCAGGATACCGCGGCTTCGCAGTGGACTGAAGAGGAGTACGCGCGTGGCGGTGGCGGGTCGGTGTCGCCGCGGTACTGCTCGGCCGCGTCCACGCCGCACGGCGCCGCGCCCGCCGCGTACCCGCACCCACAGCACTACCCCGCGCCGCCTACATCACTCTTCAATACTACTTCACTGTCGCTAGGGCCGTATCATCCTGCAAACATGAATGGACACATAACTGAACACTGTAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAACGGGAATTCAAAAAGCGCGGGCGACTGTCCAGCAAACACTCATACAAAATGCAACTACGATGTGAAAGAGTCGCTGAATAAAGAGACCAAGTTGAGAAGCGCTTTTGCTGTTGTAAGACACAGAATGGGTGGTCTAGTCTCATCACCGTTCAGCGTGAATCCGTTCTCATTGCCGACATGCAGCGCGCAACAATACGCACAAACAGCGCCGCTTGCGTCCAAGTAG
Protein Sequence
MSQQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPDTNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPGASMPFNSYSGQLAVSVQDTAASQWTEEEYARGGGGSVSPRYCSAASTPHGAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHITEHCNAYNTKDSGHYSERNGNSKSAGDCPANTHTKCNYDVKESLNKETKLRSAFAVVRHRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-