Aeph005840.1
Basic Information
- Insect
- Acentria ephemerella
- Gene Symbol
- GATA-B
- Assembly
- GCA_943193655.1
- Location
- CALPDL010000031.1:2452356-2456398[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-16 1.1e-12 47.6 7.8 1 34 60 92 60 94 0.97 2 2 1.7e-17 4.7e-14 52.0 6.4 1 34 113 145 113 147 0.97
Sequence Information
- Coding Sequence
- ATGCGCGGTCGACGGCCCGGGAACATGCCGCCGCGACCTGAGCCGTCATTGTTTACCGATCACGAGGGTGCGAAGGTCGCACATGTTTTGATTGTGACGCGGCCGCGACGTAGCACGTCGTGCGCGCTCAGCACTCTATGCCTCGAGGTGGCGGAGTTGTTCACGGAGGGCCGCGAGTGCGTCAACTGCGGCACCGTGCACACGCCGCTGTGGCGCCGCGACTGCACCGGCCACTACCTGTGCAACGCGTGCGGGCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGGCGCCGCGGCGGCCGACGGGCAGCAAGCGGCCGGGCACCATGTGCACCAACTGCAGCACCATGACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACAGTCTGCAACGCTTGCGGACTCTACTACAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACGCCATACAGACGAGAAAACGTAAACCAAAGAATGGAATAAAGTCAGAGAGAAATCTCAAAACTGCAGTCCAGCGAACGTTAGCGGGCGTCAAAATGGAAAACTTGCTGGAGAGCTCCGTGCGCACGAGCGTAGCGGGGGCGGGTGCCGGCGTGGGCGCGGGGGCGGGAGCGGGAGCGGGGGCGGGCGGGTACTACGCGCCTCACATGAAGCTGGAGTCCCCGCCGCCCGCGCACACGCTGCACGCGCCGCTGTACGAGGAGTCGTACCGCCGCGAGCGCCTCGAGCGGCCCACCGTCGTGTCGCTCGGCAGCTGA
- Protein Sequence
- MRGRRPGNMPPRPEPSLFTDHEGAKVAHVLIVTRPRRSTSCALSTLCLEVAELFTEGRECVNCGTVHTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKAPRRPTGSKRPGTMCTNCSTMTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDAIQTRKRKPKNGIKSERNLKTAVQRTLAGVKMENLLESSVRTSVAGAGAGVGAGAGAGAGAGGYYAPHMKLESPPPAHTLHAPLYEESYRRERLERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01082089;
- 90% Identity
- iTF_01082089;
- 80% Identity
- -