Basic Information

Insect: Acentria ephemerella
Gene Symbol: RREB1
Assembly: GCA_943193655.1
Location: CALPDL010000005.1:2388510-2402122[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.069 4.7 8.1 0.8 1 23 106 129 106 129 0.95

2 12 1.2 79 4.3 1.6 1 21 171 191 171 192 0.82

3 12 0.02 1.4 9.8 0.1 1 23 319 341 319 341 0.97

4 12 0.0011 0.073 13.8 0.4 1 23 350 372 350 372 0.99

5 12 0.00066 0.045 14.5 2.0 1 23 378 401 378 401 0.97

6 12 0.0027 0.18 12.6 1.6 1 23 744 767 744 767 0.96

7 12 0.00022 0.015 16.0 1.3 2 23 963 984 962 984 0.97

8 12 0.023 1.5 9.7 5.3 1 23 990 1013 990 1013 0.97

9 12 0.14 9.5 7.2 1.3 1 23 1046 1070 1046 1070 0.91

10 12 0.25 17 6.3 0.2 1 23 1094 1117 1094 1117 0.84

11 12 0.0016 0.11 13.2 0.2 2 23 1157 1178 1156 1178 0.96

12 12 0.025 1.7 9.5 5.3 1 23 1184 1206 1184 1206 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.069	4.7	8.1	0.8	1	23	106	129	106	129	0.95
2	12	1.2	79	4.3	1.6	1	21	171	191	171	192	0.82
3	12	0.02	1.4	9.8	0.1	1	23	319	341	319	341	0.97
4	12	0.0011	0.073	13.8	0.4	1	23	350	372	350	372	0.99
5	12	0.00066	0.045	14.5	2.0	1	23	378	401	378	401	0.97
6	12	0.0027	0.18	12.6	1.6	1	23	744	767	744	767	0.96
7	12	0.00022	0.015	16.0	1.3	2	23	963	984	962	984	0.97
8	12	0.023	1.5	9.7	5.3	1	23	990	1013	990	1013	0.97
9	12	0.14	9.5	7.2	1.3	1	23	1046	1070	1046	1070	0.91
10	12	0.25	17	6.3	0.2	1	23	1094	1117	1094	1117	0.84
11	12	0.0016	0.11	13.2	0.2	2	23	1157	1178	1156	1178	0.96
12	12	0.025	1.7	9.5	5.3	1	23	1184	1206	1184	1206	0.97

Sequence Information

Coding Sequence: ATGTGTTTGCGCAGGCGCCGGCGTGGTCGCTCGTCGCGGGCCATGCAGGGAGCCAGCGCCCCCGCGCCACCCGCGGCAGAAACGCCTTCTTCGCAACAAATCAAAACCGAAGAGGTCATCCGGGAAGCGAAAATTGAAACTAAGGAGGATATGGACCAAATGGTCGAGAAGAAAAATATGAGGCCTCATAGGACTGCCAGCATTGACAGCGACAATCGCTCGGATAGGAGTGAGGAAGAAGATTCAAGAAGAGCTCGCAAGAGGGCAGCGTCTACTTCCCCTTCACTAACACCGTTAGACAAAAGAATCGCTAGATTCGAATGCCAGAAATGCCGCTTGGTTTTCGACTCCACTAACGCTTATAATATCCATCGCTACTCGATACATGGCGAAAACACTAGAACAGGCTTCGATGATATCACTTTTGTCGACTTATCAAGCAAAAAGTTTCCAGAAATCGCTCGTGGTTTGTGTGAACGTAACCAACATATCTCTGTCACAGAGCAGCGTTTCAAATGCGATATGTGCTCAAAAAATTTCCCATGTGAACAATCCTTAGATATCCACAGAAAATCATGCACTATAACTAGAGTGCAGAGCCCTGAAAGAGAAAGGAGAGAGGACTTTTTTGCGAAACTTGATCTTAGAAATAGATCTTTTGGCATCCCTGGTACTTTGACACCTCCAATGGACAGATTTACACCCAAGTTTGACGATAATCATCTCACTACTAACGGAATAAGACATATTGATGCAGCACGCGATTTGGCAGATATTCAATCAATCTTAAGCGTTACATCCACTGGGAGCCTTTTAGAAAGACTCACTGGCACCAGGGTATCATTAGGTGATGCCGTGTTAACACCTCCTGATACTGGATCTAAAGAGAGAGACCAAGAAGAGACACAAGACAATTTCGCAGCTGAATTCAGGCGAATGAAATTGCGAGGGGAATTCCCATGTAGATTGTGCCCTGCGAAATTTCCTAATCTTCGTGCACTAAAAGGACATAATAGAGTTCATCTCAGTGGCACTGGACCAGGACCTTATCAatgtaatatgtgcccacatgcctcacttgataaagcagctttagtgcgacatatgcgtacacacaacggagatcgtccttacgaatgcgcagtgtgtaactatgcattcaccacaaaggctaactgtgaacgacacttgaggaacagacatgccaaAGTTACAAGAGAAGACGTCAAGCGGTCAATTATTTACCACCCATCGGAAGACCCTAACAATGATGAAGTGAACTCAAAACTTGCACGTGATGAAGTGAAGAGATCACTTGCATTCCACACTCCAGAAGTCGATAGACGTAATGAGAACACAGGAAGAGATACGCCGCTTACTCATTTTACAACCACTTTCATAACAGAGAGACACCCAGTTGTAGCATTAACAACAAAATCATTACCAGAAACTCCAATATTGACTCCACGAGACAATGAACAAGCTGTTCCTAGAATCAAAGTAAAAGGTATTGGTCAACTCACGCAAATACCAGAGTTCAGACCGCCTGAGATATCATTCAAACCTGATATTCAATCTGAAAGTTATGATGAAGAAGCTCCAGTTGATCTCAGTACAAGTGATAATAATAGTTGTGACGTTCTAGATCTCAGTAAAAAGAAACGTGATGTTGACAACGATGAACCCAAAGGCCCACCGAGACCATCTTTTGAACCAGATCCAGCAGCAGTTACATTTGAAAAAGCAAGACTACTACTTGCCCAACAAAGACTTTTTGAAAACACTCTTCCGAAAATAGATCCTGCTTACTATGCAACTCAACTATCACAGCTATACGGTGCAGTTCCAGGACTACCCGGATTGCCCATACCTCCGTCCTTTCCCATTAACCCTTACTTTCTCCAACCTTCTTTTTTTCCTCACCCTACTGACTCACAGGAACTTACCGAAATAAAGCAACGTATACAAAAAGAAATTATTCGTGGTTTGAGCATGTCGGGAGGCAGGTTAGTTGCCAATGAACCAGAACCACCAACTAAACAGGAACCTGAGGAAGAGGAACCCAAGCCTGTTCCACTACCAACATCGCCATCGCCAACTCCCCGAGCTGAATCTCCTAGACCCTTGAACAACAGCCATATATCCCAAAACGACTCGGTGAAGATGGTTATAAAAAATGGTGTTCTCATGCCCAAACAAAAGCAGCGGCGATACCGCACTGAAAGACCATTTTCGTGTTCCCAATGCTCAGCCCGTTTCACTCTACGGTCTAATATGGAGCGTCATGTTAAACAACAACATCCACAGCATTGGAGTGTAAGGAGACCGGCTCCACGCGCTCCCCCTCCTTATCCCACGTCTGAAGCTTTAGCCGACCGAGTAAAGTACGCTTTATTAGCTCGCCACTTAGAAAGGCCCCTCCAACAACCCGATGGTTCACCTGTGCGAAGAGATTCTGATGAAGTTGCAGACAATGAAGAAGATGAAGATGATACCCTAGTGATAGATGAGGAGCCAGAGTGTGACTCCAAATCAGAAGAACATACAGCTGCTCATAGAGCTGCGGCAGAAATTCTGATGGCTACTTGCCAACAAGAGTTCAACAAAGATTTTGATCTAAAAATAGCTGGCAACTTAATAAATAAACCGCCTTTAAATAATGAGAAAACGGTAACTGGCACAGATACAATCCAAGTTTCTGGGCCTGAGCCATTGTCTGTACCTGTTGTTCCACCCCGTAGTGATGAAGAGGAAGATGAAGAGGGGCTAGTCGCTTCAACTAGTGAAGGCAACAATTCTGGAAGTGATGAAAACAAGTCTGAATCTGATACTGGGAACCCACCGCCCAAGAAGAAGTCTGCCTACAGCCTAGCTCCCAACCGCGTGTCATGTCCATACTGCCATAGAAAGTTCCCGTGGTCATCTTCACTGCGCCGACACGTGCTTACTCACACAGGTCAAAAGCCATTCAAGTGCCCCCATTGTCCGCTACTCTTCACGACTAAATCTAACTGTGACCGCCATTTGCTACGGAAGCATGGAGGATCAGCGCGGGCGATTCTCGCAGAACCTATTCCCGATGCTGTTACTCAGCCGCAGCCAATTAATGATAGCAGAACAGTTCCAGAGAGACCTTACAAATGTGCTTCATGTCCAACTAGTACCTTTTCATCTATGGAAACCCTTAAGAAACATATGTCGTCCCGACATGGTACTGGGGATTCCCAACCAGGATCACCAAATCCCGACTATGTTGAAGAAGCATGTGATGGCCTGGTTTTCAAGTGCCACCTTTGTGAAGCTTCTTTCAGTGAGAGGGGAGGTGCCTTAGGGCATTTGGCTTCGACACACTCATCTGAATATGAACAACTAGTCAGCAAAGGTGCTTTGGATGCAGCCAGCGATCGGAGTGAAAGCGCTGATGATGATGAAAGAGGCAAATTTCCTGACCATGCTAATCGCAAGGTGGTCTGCGCCTTCTGTGTGCGTCGTTTCTGGTCGGCAGAAGACCTCCGTCGTCACATGCGCACTCACTCGGGTGAAAGGCCGTTCGCCTGTGACCTGTGCCGTCGCCGGTTCACCCTCAAGCACAGTATGTTACGGCATCGCAAGAAGCATAAGGAAGAATTGACCGATGACGAGGAAGCGACCCCACCGAACACTCCGCATGAAGATGACAACTTAACTAATGGATACCGCTACCAAGACGATGACGGCTCCGGAAATGAGATTCCAAACAACGTCAACAACAACAACTCCCCTCCAGCTGCGCCTTACGAAAAAAAGCTCAAATTGGATATGACCTCCCGCAAATACTCTTCTGAAGAAAACGATACCGAAAACAGTGGCGATCTCATCGGAAAACTCCTAGGTATCCCAGACAAAACGATTTTAAATAAACTTTTATCTTCAGCGGACGAAGCAGCCAAGTTTTTTGGAGTAAACAAATGA
Protein Sequence: MCLRRRRRGRSSRAMQGASAPAPPAAETPSSQQIKTEEVIREAKIETKEDMDQMVEKKNMRPHRTASIDSDNRSDRSEEEDSRRARKRAASTSPSLTPLDKRIARFECQKCRLVFDSTNAYNIHRYSIHGENTRTGFDDITFVDLSSKKFPEIARGLCERNQHISVTEQRFKCDMCSKNFPCEQSLDIHRKSCTITRVQSPERERREDFFAKLDLRNRSFGIPGTLTPPMDRFTPKFDDNHLTTNGIRHIDAARDLADIQSILSVTSTGSLLERLTGTRVSLGDAVLTPPDTGSKERDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPEVDRRNENTGRDTPLTHFTTTFITERHPVVALTTKSLPETPILTPRDNEQAVPRIKVKGIGQLTQIPEFRPPEISFKPDIQSESYDEEAPVDLSTSDNNSCDVLDLSKKKRDVDNDEPKGPPRPSFEPDPAAVTFEKARLLLAQQRLFENTLPKIDPAYYATQLSQLYGAVPGLPGLPIPPSFPINPYFLQPSFFPHPTDSQELTEIKQRIQKEIIRGLSMSGGRLVANEPEPPTKQEPEEEEPKPVPLPTSPSPTPRAESPRPLNNSHISQNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTSEALADRVKYALLARHLERPLQQPDGSPVRRDSDEVADNEEDEDDTLVIDEEPECDSKSEEHTAAHRAAAEILMATCQQEFNKDFDLKIAGNLINKPPLNNEKTVTGTDTIQVSGPEPLSVPVVPPRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGNPPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPDAVTQPQPINDSRTVPERPYKCASCPTSTFSSMETLKKHMSSRHGTGDSQPGSPNPDYVEEACDGLVFKCHLCEASFSERGGALGHLASTHSSEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHKEELTDDEEATPPNTPHEDDNLTNGYRYQDDDGSGNEIPNNVNNNNSPPAAPYEKKLKLDMTSRKYSSEENDTENSGDLIGKLLGIPDKTILNKLLSSADEAAKFFGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01081982;
80% Identity: -