Basic Information

Insect: Acentria ephemerella
Gene Symbol: -
Assembly: GCA_943193655.1
Location: CALPDL010000001.1:720711-730536[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0065 0.45 11.3 0.2 2 23 484 506 483 506 0.96

2 19 0.046 3.2 8.7 5.1 1 23 512 535 512 535 0.96

3 19 0.32 22 6.0 0.1 1 13 539 551 539 553 0.92

4 19 2.2e-05 0.0015 19.1 3.6 1 23 895 917 895 917 0.99

5 19 0.077 5.3 8.0 1.3 1 23 947 970 947 970 0.95

6 19 0.011 0.78 10.6 0.2 2 23 1025 1047 1024 1047 0.96

7 19 0.046 3.2 8.7 5.1 1 23 1053 1076 1053 1076 0.96

8 19 0.0051 0.35 11.7 0.6 1 20 1080 1099 1080 1101 0.93

9 19 0.00061 0.042 14.6 0.4 1 23 1109 1132 1109 1132 0.96

10 19 0.11 7.7 7.5 1.5 3 23 1139 1160 1137 1160 0.95

11 19 0.0036 0.25 12.2 0.1 3 23 1174 1194 1172 1194 0.96

12 19 0.00088 0.06 14.1 0.6 1 23 1200 1222 1200 1222 0.98

13 19 3.6e-05 0.0025 18.4 2.0 1 23 1258 1280 1258 1280 0.98

14 19 0.016 1.1 10.1 0.1 2 23 1285 1306 1284 1306 0.95

15 19 0.0028 0.19 12.5 0.7 2 23 1325 1347 1324 1347 0.96

16 19 0.00017 0.011 16.4 1.2 1 23 1353 1375 1353 1375 0.99

17 19 0.00037 0.025 15.3 5.4 2 23 1382 1403 1381 1403 0.96

18 19 0.12 7.9 7.4 1.0 1 23 1409 1432 1409 1432 0.88

19 19 1.8 1.3e+02 3.6 0.5 3 23 1439 1460 1438 1460 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0065	0.45	11.3	0.2	2	23	484	506	483	506	0.96
2	19	0.046	3.2	8.7	5.1	1	23	512	535	512	535	0.96
3	19	0.32	22	6.0	0.1	1	13	539	551	539	553	0.92
4	19	2.2e-05	0.0015	19.1	3.6	1	23	895	917	895	917	0.99
5	19	0.077	5.3	8.0	1.3	1	23	947	970	947	970	0.95
6	19	0.011	0.78	10.6	0.2	2	23	1025	1047	1024	1047	0.96
7	19	0.046	3.2	8.7	5.1	1	23	1053	1076	1053	1076	0.96
8	19	0.0051	0.35	11.7	0.6	1	20	1080	1099	1080	1101	0.93
9	19	0.00061	0.042	14.6	0.4	1	23	1109	1132	1109	1132	0.96
10	19	0.11	7.7	7.5	1.5	3	23	1139	1160	1137	1160	0.95
11	19	0.0036	0.25	12.2	0.1	3	23	1174	1194	1172	1194	0.96
12	19	0.00088	0.06	14.1	0.6	1	23	1200	1222	1200	1222	0.98
13	19	3.6e-05	0.0025	18.4	2.0	1	23	1258	1280	1258	1280	0.98
14	19	0.016	1.1	10.1	0.1	2	23	1285	1306	1284	1306	0.95
15	19	0.0028	0.19	12.5	0.7	2	23	1325	1347	1324	1347	0.96
16	19	0.00017	0.011	16.4	1.2	1	23	1353	1375	1353	1375	0.99
17	19	0.00037	0.025	15.3	5.4	2	23	1382	1403	1381	1403	0.96
18	19	0.12	7.9	7.4	1.0	1	23	1409	1432	1409	1432	0.88
19	19	1.8	1.3e+02	3.6	0.5	3	23	1439	1460	1438	1460	0.95

Sequence Information

Coding Sequence: atgtctgttaacgatcacagaaaatgcagtaagtgtcatagaacacgagctcaagatccaatggttaccttccataggtttcccaaccctggaaagaataatataagaaaAGCTCATGCTTGGGCAAAATATTGCTGGCCAAGTGAGAACTGGTCTTCACAAGATATTTTGCTTTCTTTGCATAAATCAAATAAAGTTTTATGTGGAAGACACTTTGGTCTATCTCAGTTCTATGATAATATGAAACAAAAACTAAGTAAATTTGCTATTCCTGATATTATTGAAGCTGAAGTAGAAACACAGAGATCATCAAGCCAAGTTCAAGGAGGACAGTCAAGTGTAAGGGAAAATATGCTGCAGAAACAACCATTAATGCCGATTGAAAATATTACAGTTGAACCATCAACAAGTGTATTACAGCTTAAAACTAAAATGAGCATAGAGACCGAGAGAAAATCTGAACTTTCTAAAAATGATCAGATGAGTGAAGTAGTAACTACACCACTTGAAATCCAGCATAAAGTTAAAAATATACAACAATTAAAACGAAAATTAAACAATATATGTAAAGCGTCAAGATTTTGTGGTTTATGTTTAGAATGTGAAGAAAAACTTTGGGCCATTGATAGTGAATTTGATATTGCTGTTGGACAACAGACTCATAAGAAACTACTGAAAGATATCATTGATTATATTTTAAAAGATGAGGGTAATGAAATACTTGCTAGTCTCCATCTGTGCAGTCAATGCATCGAGAAATCAATTCAATCATACCTCTTCATTTACAATGCAAAACAACTATCTAAAATAATATACAAATGTGTAAATGAAATTTATTCGAAAACGGTTGATGTTTCTGATCAATTGAATCTTTTAAGTAGTGATTATAATAATTCCAACATAGTTATTGTATTAGAACAAGATTCCGAAATGTGTCATTACACAGAAATAGGTAAAATGACTGAAATTATAGCTAAAGAAACACCAAAGCCATTTGATAAAGCCGAAATTGAACCAGAAATAAATGAAGATTTATATTCAGATTATAATGAAGATATAGTAACAGAAGCTGATAATACAAAATCAGTAATTGTTGAAACTATTGAATCCTTGTATGATGAGGACTCAAGACAGGAGGTAAAGGGACAAGATGTTAAAAATAAAGTATTTCAGGGAGTAGAATATAAAAAAGTTAATTCTGTTAAAATAGAAGACATAAACTTACAGCATGAAGATTCTGAAACCCTTTCAGAAGTTTATGGAGGCGAAAAGATTCAAATTATTGCTATTGAAGATGAAACATGTGTAGATGAATATTTAAGCCAAGTAGAAGATGAAAAGTCTGAATCATTGGACCATAAAATTGCTAAGAAAAGAAAAAAGAACGCAATACCACCACTTACATATAAATGTCGTAGAGAACAAGTATTAGGAAATGTAACTAAAATCAAATGCGCCGATTGTGATTATGTCTGCCCAAGGAGAGAGGATTTGCTAGGGCATGTTAATAGGGAGCATTTAGATCATCATCCATTCACTTGTGCTCATTGCTCTCAACAGTTTTACTCTAGAACAACTCTAAGGTATCATTTAAACCAGTTCCACAGAGAACGATATGTTTGTGAGTTGTGTGATCAAGAATTTAGTACTAAGATGAGTGAAGTAGTAACTACACCACTTGAAATCCAGCATGAAGTTAAAAATATACAACAATTAAAACGAAAATTAAACAATATATGTAAAGCGTCAAGATTTTGTGGTTTATGTTTAGAATGTGAAGAAAAACTTTGGGCTATTGATAGTGAATTTGATATTGCTGTTGGACAACAGACTCATAAGAAACTACTGAAAGATATCATTGATTATATTTTAAATGATGAGGGTAATGAAATACTTGCCAGTCTACATCTGTGCAGTCAATGCACCGAGAAATCAATTCAATCATACCTCTTCATTTACAATGCAAAACAACTATCTAAAATAATATACAAATGTGTAAATGAAATTTATTTGAAAACGGTTGATGTTTCTGATCAATTGAATCTTTTAAGTAGTGATTATAATAATTCCAACATAGTTATTGTATTAGAACAAGATTCCGAAATGTGTCATTACACAGACATAGGTAAAATGACTGAAATTATAGCTAAAGAAACACCAAAGCCATTTGATAAAGCAGAAATTGAACCAGAAATAAATGAAGATTTATATTCAGATTATAATGAAGATATAGTAACAGAAGCTGAGAATACAAAATCAGTAATTGTTGAAACTATTGAATCCTTGTATGATGAGGACTCAAGACAGGAGGTAAAGGGACAAGATGTTAAAAATAAAGTATTTCAGGGAGTAGAATATAAAAAAGTTAATTCTGTTAAAATAGAAGACATTAACTTACAGCATGAAGATTCTGAAACCCTTTCAGAAGTTTATGGAGGCGAAAAGATTCAAATTATTGCTATTGAAGATGAAACATGTGTAGATGAATATTTAAGCCAAGTAGAAGATGAAAAGTCTGAATCATTGGACCATAAAATTGCTAAGAAAAGAAAAAAGAACGCAATACCACCACTTACATATAAATGTCGTAGATGTAGAGAAATATTACCGTCTTATAAGGGTTGGAAAGAACATAATAAAATGTGTCGAAAATTGAATTCATTAAAAAAATTCAAACAAATTTTTAAATGCAAAATGTGTACAGAAACATTTGTCACTCAGAGATCGTTAAATACACATTACAAAACACATTCTAAAATACATTGCAAGGTTTGTCAATTTATTGTACCTCAGGAAGACTTGGCAGAGCATCTTAAGTTAAATCATGAAGATTATATACATATATGTAAACTATGCAAATTTTTCTCTTTCAATGCTGATGGGTTAAATATACACATGATGAAAGTCCACAGCGGTTCCAAATGTGCATTATGCTTTAAAAAAGTGAATGAATCCGAGTTGAAATTGCATAAATGTAGATTCAGCTGTTTAGAATGCAGTGATAATGTATGTATACATTATAAATATTTAATCTCGTACAGAGAACAAGTATTAGGAAATGTAACTAAAATCAAATGCGCCGATTGTGATTATGTCTGCCCAAGGAGAGAGGCTTTGCTAGGGCATGTTAATAGGGAGCATTTAGATCATCATCCATTCACTTGTGCTCATTGCTCTCAACAGTTTTACTCTAGAACAACTCTAAGGTATCATTTAAACCAGTTCCACAGAGAACGACATGTTTGTGAGTTGTGTGATCAAGAATTTAGTACTAAGCTTACTTTGAACAATCATAAAGAATCATGTGAAAATATTGAAAGACCATATAGATGCGACAAATGCCCTAGTTCTTTTAATACTCTTGAAGAATTGGCAAATCATGTAAAACTTAGACATGATGAAGAAACCTCCAATTGCAATCTGTGCGAACGAAAATTTTTGTCAAGCACAAAATTACAAGAGCATATGTTTAAAGTTCACAATGGTCTGCAAATGAAAAGGAAGAAAAGTATTTTAGACTGCCCAATATGTGATATCAAACTTGATACGAAGAAGAAGCTCATGCAACATATAGAAATTCATGGAACTGATGCCAGATTCCCTTGTAAAGACTGCAATGCGGACTTTGACAGCATAAAAAAATTGCATGCTCACATTAGAATACATTATGATGATGTGATCCAATGCTTGGATTGCAAGAAAGTTTTAACAGCTACTTTTTTCCCACACCACATGGTGTACTGCAAACCAGGTAGAGAAGAAAACGATATATATACATGCGAAACATGTGGGAAAACGTATAACTCGGAAACACAATTAAAGTTGCATCGTAAAAACCATTTAGAAAAAATACCATGTCCTATATGTAATAAACCAACTAAGCCAGTTTACTTGAAAAATCATATCAAATACATGCATAGCAAACCGAGGAAGCCAAAGAAAGAGATTAAAGGTAAAAGTAAATACTATATAAAATGTGATTTTTGCAATCATATGGTTTCAAGACAAGGAGAATTGGAGGCTCATGTTAACAGATTTCATTTGAAAGTAAAGCCGTATCAATGCAATTATTGCCAAAAAGCTTTCTTTGGAAAAGAGAGATTAAGAGATCATCTTATAACACACACAACTATTAAGACATGCTATTGCAGCATCTGTGATCAGAAATTTGAGAACAATGCTTGTTTAAAACTACATATGAGGAGACACACGGGATACACTCCATATACTTGCGAGATATGTGGCGATAGATTTAGAACATCTAGTATAATGAACACTCACAAAGTGAAAAAACATTCCGAAAGAACAGTGGCCTGTCCACTCTGTGATTCCATGTTTTACTTAACAAGAGAAATGAGGAGCCATTTCAAAAAAGTCCATTGGAAGCAGAAAGGCAAGAAATTCGATCCGAGAGATGTAAAGGAATTAAGACCAGAATATTACTATTTGTTTGAAGATGGCAGATTACCAAAAATTGAGGGAGAAGAATTGTATATATCAACAAAATTCAATGAGAAATTTGCCTGA
Protein Sequence: MSVNDHRKCSKCHRTRAQDPMVTFHRFPNPGKNNIRKAHAWAKYCWPSENWSSQDILLSLHKSNKVLCGRHFGLSQFYDNMKQKLSKFAIPDIIEAEVETQRSSSQVQGGQSSVRENMLQKQPLMPIENITVEPSTSVLQLKTKMSIETERKSELSKNDQMSEVVTTPLEIQHKVKNIQQLKRKLNNICKASRFCGLCLECEEKLWAIDSEFDIAVGQQTHKKLLKDIIDYILKDEGNEILASLHLCSQCIEKSIQSYLFIYNAKQLSKIIYKCVNEIYSKTVDVSDQLNLLSSDYNNSNIVIVLEQDSEMCHYTEIGKMTEIIAKETPKPFDKAEIEPEINEDLYSDYNEDIVTEADNTKSVIVETIESLYDEDSRQEVKGQDVKNKVFQGVEYKKVNSVKIEDINLQHEDSETLSEVYGGEKIQIIAIEDETCVDEYLSQVEDEKSESLDHKIAKKRKKNAIPPLTYKCRREQVLGNVTKIKCADCDYVCPRREDLLGHVNREHLDHHPFTCAHCSQQFYSRTTLRYHLNQFHRERYVCELCDQEFSTKMSEVVTTPLEIQHEVKNIQQLKRKLNNICKASRFCGLCLECEEKLWAIDSEFDIAVGQQTHKKLLKDIIDYILNDEGNEILASLHLCSQCTEKSIQSYLFIYNAKQLSKIIYKCVNEIYLKTVDVSDQLNLLSSDYNNSNIVIVLEQDSEMCHYTDIGKMTEIIAKETPKPFDKAEIEPEINEDLYSDYNEDIVTEAENTKSVIVETIESLYDEDSRQEVKGQDVKNKVFQGVEYKKVNSVKIEDINLQHEDSETLSEVYGGEKIQIIAIEDETCVDEYLSQVEDEKSESLDHKIAKKRKKNAIPPLTYKCRRCREILPSYKGWKEHNKMCRKLNSLKKFKQIFKCKMCTETFVTQRSLNTHYKTHSKIHCKVCQFIVPQEDLAEHLKLNHEDYIHICKLCKFFSFNADGLNIHMMKVHSGSKCALCFKKVNESELKLHKCRFSCLECSDNVCIHYKYLISYREQVLGNVTKIKCADCDYVCPRREALLGHVNREHLDHHPFTCAHCSQQFYSRTTLRYHLNQFHRERHVCELCDQEFSTKLTLNNHKESCENIERPYRCDKCPSSFNTLEELANHVKLRHDEETSNCNLCERKFLSSTKLQEHMFKVHNGLQMKRKKSILDCPICDIKLDTKKKLMQHIEIHGTDARFPCKDCNADFDSIKKLHAHIRIHYDDVIQCLDCKKVLTATFFPHHMVYCKPGREENDIYTCETCGKTYNSETQLKLHRKNHLEKIPCPICNKPTKPVYLKNHIKYMHSKPRKPKKEIKGKSKYYIKCDFCNHMVSRQGELEAHVNRFHLKVKPYQCNYCQKAFFGKERLRDHLITHTTIKTCYCSICDQKFENNACLKLHMRRHTGYTPYTCEICGDRFRTSSIMNTHKVKKHSERTVACPLCDSMFYLTREMRSHFKKVHWKQKGKKFDPRDVKELRPEYYYLFEDGRLPKIEGEELYISTKFNEKFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -