Basic Information

Insect: Acentria ephemerella
Gene Symbol: -
Assembly: GCA_943193655.1
Location: CALPDL010000176.1:369811-378176[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.23 15 6.5 0.2 1 23 84 107 84 107 0.94

2 21 3.5 2.4e+02 2.8 0.1 2 23 111 132 110 132 0.93

3 21 0.0044 0.3 11.9 0.2 2 23 136 158 135 158 0.92

4 21 9.4 6.4e+02 1.4 3.0 3 23 163 184 161 184 0.91

5 21 0.84 58 4.7 1.7 2 23 407 429 406 429 0.94

6 21 1.6 1.1e+02 3.8 0.1 1 21 437 457 437 458 0.93

7 21 0.0079 0.54 11.1 0.4 2 23 468 489 467 489 0.95

8 21 0.92 63 4.6 2.4 1 23 505 528 505 528 0.94

9 21 0.021 1.4 9.8 2.2 1 23 537 560 537 560 0.94

10 21 0.51 35 5.4 0.8 1 23 571 594 571 594 0.93

11 21 0.18 12 6.8 2.6 2 23 636 658 634 658 0.88

12 21 3 2.1e+02 3.0 0.6 1 23 663 686 663 686 0.90

13 21 5.8e-05 0.004 17.8 2.3 1 23 692 714 692 714 0.96

14 21 4.6e-06 0.00032 21.3 1.3 1 23 721 743 721 743 0.98

15 21 1.5e-05 0.0011 19.6 2.9 1 23 748 770 748 770 0.96

16 21 0.0019 0.13 13.1 3.0 3 23 778 798 776 798 0.98

17 21 2.3e-06 0.00016 22.2 1.5 1 23 804 826 804 826 0.97

18 21 0.00037 0.025 15.3 3.5 2 23 833 854 833 854 0.98

19 21 0.00028 0.019 15.6 0.2 2 23 862 884 861 884 0.96

20 21 0.00044 0.03 15.0 0.1 1 23 889 911 889 911 0.97

21 21 2.7e-05 0.0019 18.8 1.5 1 23 917 940 917 940 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.23	15	6.5	0.2	1	23	84	107	84	107	0.94
2	21	3.5	2.4e+02	2.8	0.1	2	23	111	132	110	132	0.93
3	21	0.0044	0.3	11.9	0.2	2	23	136	158	135	158	0.92
4	21	9.4	6.4e+02	1.4	3.0	3	23	163	184	161	184	0.91
5	21	0.84	58	4.7	1.7	2	23	407	429	406	429	0.94
6	21	1.6	1.1e+02	3.8	0.1	1	21	437	457	437	458	0.93
7	21	0.0079	0.54	11.1	0.4	2	23	468	489	467	489	0.95
8	21	0.92	63	4.6	2.4	1	23	505	528	505	528	0.94
9	21	0.021	1.4	9.8	2.2	1	23	537	560	537	560	0.94
10	21	0.51	35	5.4	0.8	1	23	571	594	571	594	0.93
11	21	0.18	12	6.8	2.6	2	23	636	658	634	658	0.88
12	21	3	2.1e+02	3.0	0.6	1	23	663	686	663	686	0.90
13	21	5.8e-05	0.004	17.8	2.3	1	23	692	714	692	714	0.96
14	21	4.6e-06	0.00032	21.3	1.3	1	23	721	743	721	743	0.98
15	21	1.5e-05	0.0011	19.6	2.9	1	23	748	770	748	770	0.96
16	21	0.0019	0.13	13.1	3.0	3	23	778	798	776	798	0.98
17	21	2.3e-06	0.00016	22.2	1.5	1	23	804	826	804	826	0.97
18	21	0.00037	0.025	15.3	3.5	2	23	833	854	833	854	0.98
19	21	0.00028	0.019	15.6	0.2	2	23	862	884	861	884	0.96
20	21	0.00044	0.03	15.0	0.1	1	23	889	911	889	911	0.97
21	21	2.7e-05	0.0019	18.8	1.5	1	23	917	940	917	940	0.98

Sequence Information

Coding Sequence: ATGTCTTCCGAGGACTCAGATGATGAGCCACTATCAATCTTGGCGGCCACTAAAAAATTAAGTTCGGAGAAAATAGAGATCAAAAAAATTTACATTGGAGATAAAGATTCGAAGAAGAAGAAAAAGACATTTGAAACAAGTAAATTGGCTTTGACGATAAAATTGAAACAAACTGAATCAGAAAATAAAGTGCTAGAACGTCCTACTGATGTTTGGCTCTACATGAAAGACCTGAATCATGCAGGACCTTACAGTTGTTTGTTGTGCCCAGAGTGGTTTATAAACAAAACTAAATTAATGGTTCATTACATCCTGAATCACAAAAAAGATTACTGTGGAATTTGCCGATATTTTGTACCCGATAGAGAAGCATGGCTTAATCACTTGACATTTCATATTCCATGGTCATGTTCACAGTGTAATGAAAACTTTCCTTCTGAATCTGAAATGCGACAACATTTGAGTGAAGTCCACAATTTGGTACATTGTCGTCTATGCCATTTCCGAGTATCTGATGATGATCAGTATAATGCCCATCTCTTCCAAAAGCACAGTGTCACAAATGTTGCAAGCAAAAATGAAGAAATATTATGGGGCCATGAATATGATGGTAGTCTTAAGTTCATCTGTATATTATGTTCCAAATCCAACAATTTGTCTATGAATTTTTTCAATCACTACATGGGTTATCACCATTTTACACTGAAGTGTTTTTCAAGTCTTATTTCAGGAAAGGATAATATACCATTTACTGTTGATGGAGCTGATGTCAGCTCTCAATTTGTTGATATTGAACTTAAAAATCAAATGAAATTTGGTTATACTGAATTAGAAAAAGGTTTAGATAAAATAGCTGATAATGCAGATTTAGAAAACGCTGATAGTAATAATGAGTTAAATGTTCTTATACCAGAAATTAAACAGGAGGTTCTGAGTGAAACAGATGAAATTAAAGATATTGAAGAAATAAACAAATGTGAAGAAGTAGTAAAGAATAATGAATCTTCACAGAAAACAAATGAAAGTGAAAAAAATGAGCTTTTGAATAATTATGAAGGTGATGAAGACTTTGATGTCACATTGGTGGAATTGATTGTACTGCAAAAATGTTATTATGACTACATTAACCAAACAATCAATCAGATAAAATCAAAAAAATTACCAGAAAATTCATCAATAGATTATCAGAGCATTAAGAAAGATACTTTAATGCAAATTAGCTGTTCATTGTGCAAGACGAAGCTTGACTCTCTACATGGTTTCACTACACACATGGGAAAGATGCATTTAGTGAAAACAATGCCATCATTCTCCTGTAGAGTTTGTGCAAGTACATTCGACAATTTACAAGAGTTTGAAATTCATGTTATGGAAGAAATGAAAGAGTTTGATGATTTATGGATATGTCAGTTTTGTGAAAAAGAGTTTGACAATAGAGAGGCAACACGTCGTCATTTGAACGAACATTGGGATGTGTTAGAATATGACAATTGTTTTAGTCCTCATTTAGGATTTAAGTGTAAACATTGCCCAACTTTATTTTGGAATGAGACAGATAGAAAGACGCACCAAATAAGAGTACATTTTAGCAAGAATAAAGAAGATTATTATAAATGTGAAAGTTGTTCAGAAGTATTCAGTGATAAGGTTTGGTTTGTCTACCATTACTTACATAAGCACCAGACTGACGGTAATACTGCAGCATATCTGTTTAAATGTTGCCTGTGTTCTGTGGTGCTTTCCACGATAGATGAGATGAGAAAGCACTTTGCGGTAGACCATCCAGAGGCCAGGAAGCGCTTCTGTTCTTTAGGTTCATGCCTTTATAGACCTCTGAGTCATAAGAAGTCCTTCAAAATTCACGTCAAGTTGGTGCATAAAACCGTAAAGCATCGAGACCGTTGCAGCTGCGTGATCTGTGGTCGGGATTTCTCTAGTTCACGAGCGTGTTCGACCCACATGGCCCAAGTTCACGGTCCAGGGAAATTCAAGTGCAAGTTATGTAGTGAGGTGATGACAACTGGTGATGAGAGAAAACTTCACTATCTGATTCGTCATCCTGGAAGACATCCTTTCTCTTGCAACGAGTGTGGCAAATCATTCCAGTATAAGTCTTCGCTCTACATGCACAAGCAAGACCACTCCCCCAACAAACCGAGCTACACTTGCAATTATTGTGGGAAAGTGTTTATGAAGAAAGATTCCTTCCGAGAACACGTGCAGATCCACGAAGGTCCTCGGCATGCGTGCTCGTACTGCCCCAAGCGGTTCGTTCAGCGGTCCAACATGCTCAGGCACGAGCGGCGTCACACGGGCGAGCGGCCGTACGGATGCTCCCACTGCGATCGAACCTTCTCTGACAAGGGCGCTTGTACAGCACACGCGCGTACTCATACAAAGGAACGATCATTCGCGTGCTTGTATTGCGGCCAGACGTTTGTGCAGAAATCCAAATTGACATATCACATCAGAAAACACACCGGAGAGAACCTAGAGACCTGCACAGTCTGCTCTAAGTTGTTCACTAGCGCTTGTTCGCTTCGCGAACACATGAAGACACACGAAGCTAAAAAGTACTCAGTACCTTGTCCGCTTTGTGGTCGCAAATACCAAGATGAGAAATACATGATGCGGCATCTTCGGACCATCCACGCCACCGTTCGGTACAACTGCCCGCTATGCCGCAAAGCGTTAACCTCTGCCTCCGGCCTGCGGCAGCACGTCGTCACGCATAGTGACGTCAGCATGTTCAGGTGCAAACTCTGCCCGAAGTCGTACGCCGTCCGGCGGACATTAATCAGACATCTGCGACGACGGCACTTTTTGAAAGGATCAAACGCAGTTATGAAAGAGTTCTTCCACACATTAGACCCCAGAGATTGTAACCTTGACCTCGACGAAGACACTATGAACAAGATTTTTGGTCCTCGGAAGAAGAAATCCGAAGTTATAATAGGGGACTACATGACTATTAAAAAGTTAGCTGATAATTACAGGACAAATGCTGAAGAGCGTGAAACAGGTGATGAGGGCAGTGAAGATGAGAAGGAGGAAGATGAAGAAGAAGCAGAAGGAGAAGCAGATGCAGAAAACATTGATCAAGTTATATCGGATTTGGAGCCAACGGATTTTGTTAGTGTCAAGATAGAACCCTTAGAACTAGATGTGGAGTGA
Protein Sequence: MSSEDSDDEPLSILAATKKLSSEKIEIKKIYIGDKDSKKKKKTFETSKLALTIKLKQTESENKVLERPTDVWLYMKDLNHAGPYSCLLCPEWFINKTKLMVHYILNHKKDYCGICRYFVPDREAWLNHLTFHIPWSCSQCNENFPSESEMRQHLSEVHNLVHCRLCHFRVSDDDQYNAHLFQKHSVTNVASKNEEILWGHEYDGSLKFICILCSKSNNLSMNFFNHYMGYHHFTLKCFSSLISGKDNIPFTVDGADVSSQFVDIELKNQMKFGYTELEKGLDKIADNADLENADSNNELNVLIPEIKQEVLSETDEIKDIEEINKCEEVVKNNESSQKTNESEKNELLNNYEGDEDFDVTLVELIVLQKCYYDYINQTINQIKSKKLPENSSIDYQSIKKDTLMQISCSLCKTKLDSLHGFTTHMGKMHLVKTMPSFSCRVCASTFDNLQEFEIHVMEEMKEFDDLWICQFCEKEFDNREATRRHLNEHWDVLEYDNCFSPHLGFKCKHCPTLFWNETDRKTHQIRVHFSKNKEDYYKCESCSEVFSDKVWFVYHYLHKHQTDGNTAAYLFKCCLCSVVLSTIDEMRKHFAVDHPEARKRFCSLGSCLYRPLSHKKSFKIHVKLVHKTVKHRDRCSCVICGRDFSSSRACSTHMAQVHGPGKFKCKLCSEVMTTGDERKLHYLIRHPGRHPFSCNECGKSFQYKSSLYMHKQDHSPNKPSYTCNYCGKVFMKKDSFREHVQIHEGPRHACSYCPKRFVQRSNMLRHERRHTGERPYGCSHCDRTFSDKGACTAHARTHTKERSFACLYCGQTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKTHEAKKYSVPCPLCGRKYQDEKYMMRHLRTIHATVRYNCPLCRKALTSASGLRQHVVTHSDVSMFRCKLCPKSYAVRRTLIRHLRRRHFLKGSNAVMKEFFHTLDPRDCNLDLDEDTMNKIFGPRKKKSEVIIGDYMTIKKLADNYRTNAEERETGDEGSEDEKEEDEEEAEGEADAENIDQVISDLEPTDFVSVKIEPLELDVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -