Basic Information

Gene Symbol
-
Assembly
GCA_943193655.1
Location
CALPDL010000119.1:411986-424691[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-14 2.8e-11 43.9 0.0 2 89 320 390 319 390 0.91

Sequence Information

Coding Sequence
ATGTTAACCATGACGAGTCTTACTCTTACTGAAATACACACGCACTACAAAAGTTGGTATAAAAATCAGTGCATCGCGGCTCGCTGGCCAAGTGCATCGAACGCTCTGGTTTCCAACGTTAATTACGTAACCAAAGCAACTTTAGCCATGGTCAGTCACGGTTGGGTCAATCATAATTTGTTATTTCTCGCTCCTCCGTGCACAAAACCATTTTTCCAGGTTGTTACAGCAACATTCACCAATCAACTCACGTTGGGCCAGGGTTCCAATAAACCGCACCCGTCGTACAAGGGCGCGAAGACCCGGTCTACATTCGTCGCGCGATACCAGGATGAAGTCCTAGCGATCAATGACAAAGTGGTAGTCCGTGCTGAAGACCTACTAAGCTGGGTGTGCGACGGGACCGGCTGGAGATGGGGTCTCCGCGCTGTATGGCGGGGGGCCTGCGCGCCACCGCAGGAGCCGCGACACACGCAGGCATTACATCACACGAAATTGGACTTTAGTGACGTAGAACGAGAGAAGAGTGCTATTGTGGACAACGACAGCCCAGGGGTAGTAGTGTTTTCCTATCCTCGTTATTGCCGCTACAGAGCATTGCTGTCCCGGCTGGAGGGTATCCAGGGAGACTGGTTGAGAGACTCGCTGGTCGCAGCCTTAGGAGGATATGCTGCACCAACCACTAACACTAGGATATTATATTGTAAGGACACATTCGAATACCCCGAACTAGAAGGACACGAGTTCGTCTGCAACGAATTAGCACCAAAATTGAAAGGAAGACCACGTGGTCGAAGACGACGAGCATCTCCTGACGCGAGCGACCACTCAGAGTCTGATCATGACCATGAAAGTGTTAGTACAGCTATGCCCCAAACCCCACGCCGGCTATCCCTTCGTAACGGTGGAGATAAACATTCTGAAGATGAAGAGGATACGAGGAAACATAAGACAGAAGAAAAGGCCTTCCTCACTCAGCTGAGACAGTTCCATCGAGACCGTGGGGATTCCTGTCCTTTAGAAGACTTATCATTACGGTCGTTATACCGTGGCGTTAAATCTCGAGGTGGTTACGAAGCGGTGTGCAGACAACGACTATGGCGGGCGTTGTCGTCGGAGCAGCCTGCGAGAGCTAGGAGACATTATGAGAGATACCTGTTACCTTATGAAAAACATGAAAACCGCCGGTCTCGTCTCAACGGTCGCATAGAACCAAGAACAGTGGCGACCATAGAGCTGGACGACGACCATAAACCACCAACTCCACCACCAGCCGTCACTGAAGTGCCAGACCACGAAACTCAGTTCAAAGAAGAATTGAACATCATATCGAAGCCAGCAGAGGAGTTGAACAGAGAATTTCTGGAGTCACTGCCCAAGGAAGAGCAAACCGAGAAATCTGTGAAGATATCTGTGAAGCCGGTGGAGACGCTCGTAGAACCTGCCAAGACGGAAACCAAGGATGTGGTAGCTGTTGAGAAGGTGGACCTGGTCAATCATAATAGTGGTATAATAAAAGCAGACACGACCATTTCTTTGGAAGTGTCTGACGTGTCAAGCTCGCTGTCATCTCTGTCGTCGCTCAGTGACAAATATGTCAACGGTCACGACCATCAGAAGAGTAGTCGTCCAGCGGGGCGCAGCTCCCTCCGAGCTGTCCGCGTGAAGGCCGGCCGCCCGGCGCCGCCCGCCGGCGCTTCCAGCATAGTCCGTTCGGAGTCAGGCCCCGCCATCAACAACTTCGGCATCCATCGACCTCCGCCCCCTACCAGCTCGGTCGACGATGATATAGTCGAGGTTCCGTACAAACCGAAAACTCCAGAAATCATTGACTTAGACGAATACCCAGAAAGCCCTCAATCTGTAAAAAATAAAAAACTAGATATTCTCAAAGAAAGGGGATTAGAAGTGACGGCAGTCCCCGCCTGGCCCCTCCCCAGTCCTCAAATTACCCCTTTAATGAACCAATCCCCTATGCTAATAAACCCTGCTATGCAGCATCAAATTATTACCCAAGCTCAACTATTTCAAATGTACAATATCTTACCGGCCAATTACAACGGCATTCAACCCCCGAAAGTGATCCAAGGGACCAGTATTTTCGGTTCTAGTGGCCCTGAGAAGACTGTTTATGGCAACCCCAAGGATCCTTTCATGCCTCCCCCTCATATGTTATTGGGGGCTCCCTTGAAACCGACTAGGACAGTTCCAACTTCGGCAACACCGCAAGATATTTTAGACTTAACATGCAAAACGTCTCCTTTGCCAGCAGTAGAAATAGTTAGAGTCCCAACAACGTCTTCTCCTTCTAAAACTTCCCAAAATACACCCAAAAACTACACATTACTAGAAGGCAAAGCAGTCGTAGGCTCTAATTTGGAAATAACGTTAGTCAATCCTAAAATACAAACTCCTAATAAAAACAGGCCTCCGCAGAAACGGTCGTCCAATGGCAAATTCGTGTCTAATAAAACCCCTACGCCTCCTAAAGAATCCCCAAAGTCATTTCAGTCGCCTTCTGGGGTCAAAAAGAACCCTATTGTGGTGCCGAATTACCAGATGAATTCAAGAGACAATGTGTCACCTACTAGCTCGACGGGTATGTATCTGGTGCTTTTATTAAATACTATGTTCAAAATTTGA
Protein Sequence
MLTMTSLTLTEIHTHYKSWYKNQCIAARWPSASNALVSNVNYVTKATLAMVSHGWVNHNLLFLAPPCTKPFFQVVTATFTNQLTLGQGSNKPHPSYKGAKTRSTFVARYQDEVLAINDKVVVRAEDLLSWVCDGTGWRWGLRAVWRGACAPPQEPRHTQALHHTKLDFSDVEREKSAIVDNDSPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTTNTRILYCKDTFEYPELEGHEFVCNELAPKLKGRPRGRRRRASPDASDHSESDHDHESVSTAMPQTPRRLSLRNGGDKHSEDEEDTRKHKTEEKAFLTQLRQFHRDRGDSCPLEDLSLRSLYRGVKSRGGYEAVCRQRLWRALSSEQPARARRHYERYLLPYEKHENRRSRLNGRIEPRTVATIELDDDHKPPTPPPAVTEVPDHETQFKEELNIISKPAEELNREFLESLPKEEQTEKSVKISVKPVETLVEPAKTETKDVVAVEKVDLVNHNSGIIKADTTISLEVSDVSSSLSSLSSLSDKYVNGHDHQKSSRPAGRSSLRAVRVKAGRPAPPAGASSIVRSESGPAINNFGIHRPPPPTSSVDDDIVEVPYKPKTPEIIDLDEYPESPQSVKNKKLDILKERGLEVTAVPAWPLPSPQITPLMNQSPMLINPAMQHQIITQAQLFQMYNILPANYNGIQPPKVIQGTSIFGSSGPEKTVYGNPKDPFMPPPHMLLGAPLKPTRTVPTSATPQDILDLTCKTSPLPAVEIVRVPTTSSPSKTSQNTPKNYTLLEGKAVVGSNLEITLVNPKIQTPNKNRPPQKRSSNGKFVSNKTPTPPKESPKSFQSPSGVKKNPIVVPNYQMNSRDNVSPTSSTGMYLVLLLNTMFKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00278899; iTF_01081370;
90% Identity
-
80% Identity
-