Alag026586.1
Basic Information
- Insect
- Acanthococcus lagerstroemiae
- Gene Symbol
- Pde7b
- Assembly
- GCA_031841125.1
- Location
- CM063112.1:61269025-61318251[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 8.1e-05 0.013 16.9 1.4 1 23 1125 1148 1125 1148 0.96 2 21 0.033 5.2 8.7 0.3 3 23 1186 1207 1184 1207 0.92 3 21 0.041 6.6 8.4 0.2 2 23 1214 1236 1213 1236 0.96 4 21 1.9 3.1e+02 3.1 1.7 1 23 1247 1269 1247 1269 0.92 5 21 0.0029 0.47 12.0 2.9 2 23 1295 1317 1295 1317 0.95 6 21 2.1 3.4e+02 3.0 0.3 2 23 1395 1417 1395 1417 0.90 7 21 0.12 20 6.9 0.0 3 23 1425 1446 1423 1446 0.94 8 21 0.002 0.32 12.5 0.8 3 23 1457 1477 1455 1477 0.96 9 21 0.0023 0.37 12.3 1.4 1 23 1523 1546 1523 1546 0.96 10 21 0.023 3.6 9.2 1.5 2 23 1553 1575 1552 1575 0.93 11 21 0.0039 0.62 11.6 1.6 1 21 1596 1616 1596 1617 0.93 12 21 1.3e-05 0.0021 19.4 0.2 1 23 1635 1658 1635 1658 0.96 13 21 1.7 2.7e+02 3.3 0.2 3 23 1663 1689 1661 1689 0.80 14 21 0.056 9 8.0 0.1 2 23 1696 1719 1695 1719 0.92 15 21 0.052 8.4 8.1 3.4 1 23 1726 1749 1726 1749 0.95 16 21 0.073 12 7.6 0.5 1 23 1786 1809 1786 1809 0.93 17 21 0.0024 0.39 12.3 0.2 2 23 1815 1836 1814 1836 0.96 18 21 0.074 12 7.6 1.3 1 23 1899 1922 1899 1922 0.94 19 21 7.4 1.2e+03 1.3 1.4 3 23 1968 1989 1967 1989 0.90 20 21 0.15 24 6.6 1.9 1 23 1995 2018 1995 2018 0.91 21 21 0.00037 0.06 14.8 1.3 1 23 2060 2082 2060 2082 0.98
Sequence Information
- Coding Sequence
- ATGTGGAATTGTTCTGACGTGACAATAGTCAACCTGCCTAAATCACCTAATAATAGTGTAGAGGTGTGGCATCGTAGCTTTGAATCCGTAGTGGACGGCGTACACGTTATACAAGCTAATAGAAGCGCTGAAAAAAGAGCAAGTACTGGTGGAGctCTAATCGAAGAAGGATATCACAGTACGAACCCGTACCACAATTCAATTCACGCCACCGATGTTACCCAAGCCATGCACTGCTTTCTACAAGAGGAAAAGATACGCAAGCACATAACTCCGCTGGAGGTGATGGCGTCGTTAATAGCTGCCGTATCGCACGACCTCGATCATCCGGGAGTCAATCAACCATTTTTAATAGCTACTTCCAATCACTTAGCTGCTCTCTATCAAAACACATCGGTTTTGGAGAATCATCACTGGCGTTCTGCGGTCGGATGCCTGCTCGAAAGTCACGTAGCCGATCGGCTGCGACACGTTCTGCCGGAATTGGAGAGGCAAATCAGTTCTTTAATACTCGCCACTGACATCACCCGCCAACAGGAGTTCCTCAATAAATTTAAGAaatatttaaatcaaaattcgtTGCAAATGGAGAAGGAAGAAGACCGCCATTTTATATTACAAATAGCTTTAAAATGTGCCGACATCTCGAATCCGTGTCGACCGTGGGAGATCAGCCGCAAGTGGAGCCAGAAGGTGTGCGAAGAGTTTTTCAGGCAAGGCGACTACGAGCAGCAACTCGGTTTACCTCTCACTGCTCTCTGTGATCGAAGCAGCTCTTCTGTTCCTAAAATACAGTCTGGCTTTTTCAAATTCGTCGTTATACCGCTGTTCGACGAATGGCACCGGTTTCTGGGAACAAAACTCTCGACCAGCATGATGGCGCACCTGAAGGCGAACCACGGGAAGTGGGAGATGCTGCTGCAGCAGGAACTGGCCGAGGAGACGCGCACCGAGATGTCGGACGCCGATGATCCGCTGGCGGACGACTCGACCGCTCTGGACGTCGACAGCCAGTGCGATTCCAGACGCTGTTCACTGCCATCCGTCATGCTGGAGACGGTCGATCGAAGCGGGCGACGCCACTCGGTGCCGCTGAATCTGTCTCGAGACTGCTTAGCCGGTCCTTCTTCGGGGCGGCGGGAAAGTCTTCCAGTCTCGGTCGAGCCGCGCCACAAGCTCGTCCTGGACCCGATACAGCATctggaggaggaggaagaggattTGGACTTCTCGTTCCGGTCGTCGTGCAGCGGCAGTCTGCAGAAGTCCTCGGAGTGCGGCAGCACCGATGAGCGACCGGTCAGCGCCGAGAGTCTGCTGCCGGAGCCGAGCATAGCGACCATCACCAACTCGCTGGACGCGACGCGACTGTCGAACGTGCTGCACGGGAGCACGATGCTGGCGCCGCCGGTGAACAAGATACTGACGCGGCAGCAGACCTTTCCACCGATACAGACGTTCGTGCGCACGCGGTACCTGTCGACGGCCGGCGAGATGCCGGCGCAGCAGAGCGCCAGCAATTCGTCGTCCACCAACTCGAGCCGCAACGAGCTGTGCAGCGCCCCCAGAACCGGATCGTCCAGCAGTGAAGTCGGCGAGGGGGTGTACCTGAAGCGGGACTCATCGTCGTCGGATAGCGATCGCGGTAAAAAGTCCCTGTTCAGCGAGAAAGAGAACGTTAATCCGAGACACGAGCACGAGTCCAGACTTCACGGCAGTTTACAAGAGCTGTCGCAGCCCCGTCGCTCATCAGCGCCCACATCTCATGAAGGAACGTCAACGTCTCAAGAACGGGAGAAGCCCAGACGCGGATCAGTCGATTCATGCAGAGCCGATTCACAAGAATTTTTGCGTAGTTCGGATGGCAACGGTGGCAAACACAGTATTAGCATCATCACTGGAACGCAAGAAGTACTTAGACGAAGTTCAGATGGCAACGGTGGTAATGGCAAAAACAGTATGACCGTCATCACAGATTCGCAAGAATTGCAGAGGAGGAGTTCAGACGGTAATGGCAGCAAAGCTAATAGACGTTCTAGTCGTAATCGCAAATCGCTGAAGAGACGCAGCTCCGGAGGTCCGGATATACTGTTACCTCGTGAAAAGTTTAGCGCGCCCAGACGCGGATCACTGCCTTGTGATGTGCTGCCTACCAGTGTTAAAGATTCGAAGAAAGTGACAATTGAATTGATCTCGATTGCCGGAAATGTAAGCTCACTTCACAGTATTGAAGTTATGATAATGTTTATCGATTCTGGCGAGTCCGTGTTGATCACTCACGCTAATGTGAGAAAAGTGACGAGAAAACTGAAAGATTTGTTTCGAGATTGTTCGCCAACTCGACTTTTAAAGCATGCCATTGTTCGGGCGCCAAATGTAAGACTAATCGACGTCGCCGTCTCAGGATTAATATTTTGCGACGAATCCGAAATCGAGAACAAATTCAACGACCTGTGTCGTTTATGCGCCTCCTACGATAACGTGAAGATCAGCCTATTCAGCGATGAAGGCAAACGAAGacagttgaagaagaaaattcaatGTTGCCTACCTTTTAAGGTCGAAGAAAATGACGCCCTACCGAAGTCGTTGTGTTATAAGTGCGTGTACAATCTGGAAAGCACTTACGAGTTTCGGTACAAGTGTATTCAAGTGAATCGTAATCTTGAAAAACATGTGAGCAAGAAGGAGAAAGAGAAGCAGGAGAAAACAAGTTCGAGTCAGTCGCATCGTATTCATCCTGAGGTGTCTATATTCGCCATACCAAGTGGTCAAACAAGTAGCAATCAAAATGCAAATGAGTCTAACTCTTCAGTCGTCGACTCTGATGATGTTCCGAATCCTCTCGACTTTTTAGAGGTGGGCGTCAACGCGGAAGATTCGACTCCAAATTCTCGCGTGAAACACAATAACGATAGTAAAAAGCAGTACGTATGGAACGCGAACAAACGATGGCTGTCTGTCGAACACAAACCACTACAGACCGAGCAGAAGCCGGCAGATCCAAAATTGAACATGAAATACTTTGACATGTCGCAAGACGACAACAGCTTGAATCGCCGCAAAAACAACAACCCGCGAAAGATCGCCCGCGACACCGATGACTTCGAGAGCCTGGGGGCCACGTCAACGCCAGAGTCGAACCAGCTGACGTCAACGCCGTCGACCTCCACCTCGCAGCCGTCGACCTCTACCTCGCTGCCTACGCCAGGTTTAATCGCCATCAACGTGGCGCCGCCGTCTAGCTTTGCCGTCACGTCAGTGAAGACGAGCACGCCGACTACCAATAGCAAACCGCCGCCAGACACGCCCAGCACACAACCTTCAACCTCTGTGATAGAAAGTAGTTCGCCGGAAACGGAGCAGCAGACCTTCTCATGCCTGCTGTGCGAACGCAGCTTCACCCAGCGGTCGGCGCTGAATAAGCACTTCTCCACCATCCACGGCATCGAGCCGTACGAGATGCAGACGCCGCTGATGGGCCACTCGGCCTTCTCAGAGGACATTGACGAGGAGCTGGCCGAGAGCATGGTCGAGCAGGAGACGATCATCTTCTGCGAGGTGTGCCGCCGCGAATTCCAGGACCGCGCCAGTTTATGGCTGCATATGGTGCACGCGCACCGAGAAGAGGCATCTGTCTCGTGCGGCATTTGCCTGAAGATCTGCAGTGACAACATCACCCTAATCGAGCATGTGAACACGGCGCACTCCGGCGACAAGGCGGTGGTGCAGCGCCGCTACTCGTGCCAGGTGTGCGGCCGGCAGCACGACTCACGACAGAAACTGCTGAAACACGCCACGCTGCACACGCTGATCGACAACCAGGGTCAGACCATTCAGCCCGAGGAGATGGTTTCGCTGAATAACGCGTTCGCGCCGCGTGAATGCCCTATATGCCACAAGAAATTCTTCAACCAGGAGAAGCTGGACCAGCACACGCAGAACTTCCACAACGAGTCGCACGAGCCAACCGCCTCGACGCCGTCGGTCGTCTTCAAGTGCGAGCTGTGCACGTCGACGCACGCTACCCGCATCGACCGCTGGTGGCACATGTATCATTCGCACAACGGCGACCAGCGAGTGACCTGTGACCAGAGCGGCTGCCGTAAGATCTTCGTCACGCAGACGCTGAAGGAGGATCACTGCAAGACCCACCACCAGACGCAGGGTCAGTTCACCAACACGTGCGAGATCTGCGGCAAGCTGTGGGAGTCGCGCACCGTCTTCTACAAGCATATGATGAACGTGCACCCAAAATGCCTGCCTACCATCTGCGGCGTCTGCATGAAGATCTTCAGCAACGTGCCGGAGCTGCGGCAGCACGTGCAGATCGAGCACCCGGCGCTCGAGGAGTCGAATGGCATCTGCTGCGATGTGTGCGGCCGGCCGTATGCCGAGCGCTCTAAAATGCTGCGGCATCGCCGCGTACACAACGTGACAGACGGCGTGCCGTTCACGGCCAGCATGGTGAAGAAAAAGGACGACCTGCAGTGCAGCATCTGTCCGGACGTGCAGTTCGACAAGCTCGAAGACATCGCCGAGCACCGGCGCACCGCGCACTCGTTGTTCGTGTGCGATCTGTGCCCCAAGTTCTACAACGGCAACAATCACCTGTGGAAACACGTCAGCAAGCAGCACAAAGGCGACCCGAGCGTTACGTGTAACATCTGCTTACGCACGTCGGCTAGCCGGGCGCATCTGCAGCGACACAAAGTGAAGTACCACTCGGACCCGGTGGAGCGGCTCATCAGCCGGCAGCAACCGCACGACACCGAGCCGCAGACGCACAAGTGTCCGCTCTGCAGCCGTGAGTTCCGCATTCGCAGTCTGCTGAAAAAGCACTCGAAATCGTGCAAAGGCGTGAAGCCACCCGTAATTAAGGTGCAGCCGGTGAACGGCGTCTTTCCGTGCGGCAAATGCGGCAAGGTGTTCGAGCAGCAGGGCGTGCTGGCCAAGCACATGAAGAACTCGCACGTGATGCACTTCTGCGAAGTGTGTCCGGACGGCGAGTCCAAGGTCGGCTTCGACAAGAAGAGCGCGCTGCTGCAGCACATCCGGGCGCAGCATCCGAACGATCCGGAATTGGTGTGCGACATCGAGGGCTGCAGCAAGGTGCTCCGTGTCAAGGCGGACCTGCAGAAGCACAAGCTGGAGCACGTGCGCGGCTACTTCACGTACATCTGCGAGTGCTGCGGCGATATGTTCTCCAACCGCAAGAAGCTGCGTAAGCATTTGCTCACCTTCCACAAGAGCGACGTGAAGCACCTGTGCGCTGTGTGCGTGGCTATCATGACGTCGGTGACCGAGCTGGCGGACCACGTTCAAACGAACCATCCGCTACTGCTGCATCGGCCGTACACCTGCCAGATCTGTGGCAAGTGCTGGTCGGTGAGCAGCAAGGCGGTCGACCACATCAGCAAGGTGCACGGCAAGGAGTACAAACCGTGCAAAATCTGCTGGAAGGTGTTCACCGTCGAGAAGGAGTTCGAGGAGCACGTACAGAACCATCCGCCTGTTGAGGAAAAGCCGGCGGCCACTGTAAAGAAGGATACGAGCCGTGTGAGGCCGAGCCGCAGCACCATGCAGCAGGAATTGATCGGACTGGGTATCGATTACGATAGTGAGATTCTGGGCAAACGGCCGGCCGATGAGGAGCCGAATTACGAGGAGAGCGGCAAACGACTGCGCAAGAAGTACAAATGCACGTCGTGCAAAGACACATTCAGATCAATCGACGAATTGAAGGAGCATAAACTCGAACGTCACGGAAGTCAGGTATGCAATCCGGAAGATTATGTCGAAGAAGAACCGATGGGCGAGGAAGGGGAGCTCGGCAAGGAAGACTCGATGAAAGAAGTGGACCCGCGAACGGAACGTTGGACCGATGTGAAACCGATCGCGTGCGACTGCTGCAGCAAAGTGTGGAATTCGAAGAAGCAGCTGTGGCAACATCTGATTCGCTCGCATATTTACGAATCTATGCACACTTGCGGCATCTGCTTGCGGGTGTGCAAGAACTACTACGACCTGGCCTACCATTTGGACGCGCAGCACTCGAACTCGATGAACGACCACGTGGTTCGGTTCGCCTGCTACGTGTGCGGCCACTACCACAATTCGCAGAGCAAGCTGGACAAGCACTTCGTGGTGCACAAGAATCCGCCGCCGCAGTGCGAGTACACGTGCCAGTACTGCCAGCGGGTGTACCGTTCGGTGGTGTACTATCGCGAGCACATGCGGGCGCACGAGACGAGGACGGCCGATAAGACGGTGGCAGCGCCGAAGAAAGAGCAGTCCGAGTTCAGCGGTTTCAGTATTAACAATATTTTGGAGACGGGCGACGAGCACGAGGACGACATCGAGCTGGAGATGCAGAAGAGCGTCGAGGACGAAGACTTGGTTGAGCTGGACGAGGACGACAGCGACTCGGACGACAACAGTAATTCGGGAGAGCTGTGCGACGATAACGTGTTCCGCGGATACGAGGCCGGCTACAATCAGGCGCAGACGTCCGGCCAGAAGCAGGCGAACCAGCTGAACAACGTGGCGAAGGATGAGAAGTTCGCGTTCGCCAGTATGCCGGCGTACTTTAAGGCGAAGGAGGAGAACCTGGAGGACGACATCGACTTGGAGTCGAACATCAGCTGCTCGTCGGTGAACAGCGCCAGCGAGTTGCAGGAGGAGGACGAGGATGAGGACAGCGTGCTGAACGGCAAACAAGAAGAGTCGAGTGACGAGCAGCAGCGCGCATACAGCAGCGTGAACAACAACCAGAAACAAGATCGCAAGGTTCCCCGATTCGACGAGAAACGTAATTTTCATAACTCGAATGGAGAGAACTACTTTCGAAGAGTGACTGAGGATATATAG
- Protein Sequence
- MWNCSDVTIVNLPKSPNNSVEVWHRSFESVVDGVHVIQANRSAEKRASTGGALIEEGYHSTNPYHNSIHATDVTQAMHCFLQEEKIRKHITPLEVMASLIAAVSHDLDHPGVNQPFLIATSNHLAALYQNTSVLENHHWRSAVGCLLESHVADRLRHVLPELERQISSLILATDITRQQEFLNKFKKYLNQNSLQMEKEEDRHFILQIALKCADISNPCRPWEISRKWSQKVCEEFFRQGDYEQQLGLPLTALCDRSSSSVPKIQSGFFKFVVIPLFDEWHRFLGTKLSTSMMAHLKANHGKWEMLLQQELAEETRTEMSDADDPLADDSTALDVDSQCDSRRCSLPSVMLETVDRSGRRHSVPLNLSRDCLAGPSSGRRESLPVSVEPRHKLVLDPIQHLEEEEEDLDFSFRSSCSGSLQKSSECGSTDERPVSAESLLPEPSIATITNSLDATRLSNVLHGSTMLAPPVNKILTRQQTFPPIQTFVRTRYLSTAGEMPAQQSASNSSSTNSSRNELCSAPRTGSSSSEVGEGVYLKRDSSSSDSDRGKKSLFSEKENVNPRHEHESRLHGSLQELSQPRRSSAPTSHEGTSTSQEREKPRRGSVDSCRADSQEFLRSSDGNGGKHSISIITGTQEVLRRSSDGNGGNGKNSMTVITDSQELQRRSSDGNGSKANRRSSRNRKSLKRRSSGGPDILLPREKFSAPRRGSLPCDVLPTSVKDSKKVTIELISIAGNVSSLHSIEVMIMFIDSGESVLITHANVRKVTRKLKDLFRDCSPTRLLKHAIVRAPNVRLIDVAVSGLIFCDESEIENKFNDLCRLCASYDNVKISLFSDEGKRRQLKKKIQCCLPFKVEENDALPKSLCYKCVYNLESTYEFRYKCIQVNRNLEKHVSKKEKEKQEKTSSSQSHRIHPEVSIFAIPSGQTSSNQNANESNSSVVDSDDVPNPLDFLEVGVNAEDSTPNSRVKHNNDSKKQYVWNANKRWLSVEHKPLQTEQKPADPKLNMKYFDMSQDDNSLNRRKNNNPRKIARDTDDFESLGATSTPESNQLTSTPSTSTSQPSTSTSLPTPGLIAINVAPPSSFAVTSVKTSTPTTNSKPPPDTPSTQPSTSVIESSSPETEQQTFSCLLCERSFTQRSALNKHFSTIHGIEPYEMQTPLMGHSAFSEDIDEELAESMVEQETIIFCEVCRREFQDRASLWLHMVHAHREEASVSCGICLKICSDNITLIEHVNTAHSGDKAVVQRRYSCQVCGRQHDSRQKLLKHATLHTLIDNQGQTIQPEEMVSLNNAFAPRECPICHKKFFNQEKLDQHTQNFHNESHEPTASTPSVVFKCELCTSTHATRIDRWWHMYHSHNGDQRVTCDQSGCRKIFVTQTLKEDHCKTHHQTQGQFTNTCEICGKLWESRTVFYKHMMNVHPKCLPTICGVCMKIFSNVPELRQHVQIEHPALEESNGICCDVCGRPYAERSKMLRHRRVHNVTDGVPFTASMVKKKDDLQCSICPDVQFDKLEDIAEHRRTAHSLFVCDLCPKFYNGNNHLWKHVSKQHKGDPSVTCNICLRTSASRAHLQRHKVKYHSDPVERLISRQQPHDTEPQTHKCPLCSREFRIRSLLKKHSKSCKGVKPPVIKVQPVNGVFPCGKCGKVFEQQGVLAKHMKNSHVMHFCEVCPDGESKVGFDKKSALLQHIRAQHPNDPELVCDIEGCSKVLRVKADLQKHKLEHVRGYFTYICECCGDMFSNRKKLRKHLLTFHKSDVKHLCAVCVAIMTSVTELADHVQTNHPLLLHRPYTCQICGKCWSVSSKAVDHISKVHGKEYKPCKICWKVFTVEKEFEEHVQNHPPVEEKPAATVKKDTSRVRPSRSTMQQELIGLGIDYDSEILGKRPADEEPNYEESGKRLRKKYKCTSCKDTFRSIDELKEHKLERHGSQVCNPEDYVEEEPMGEEGELGKEDSMKEVDPRTERWTDVKPIACDCCSKVWNSKKQLWQHLIRSHIYESMHTCGICLRVCKNYYDLAYHLDAQHSNSMNDHVVRFACYVCGHYHNSQSKLDKHFVVHKNPPPQCEYTCQYCQRVYRSVVYYREHMRAHETRTADKTVAAPKKEQSEFSGFSINNILETGDEHEDDIELEMQKSVEDEDLVELDEDDSDSDDNSNSGELCDDNVFRGYEAGYNQAQTSGQKQANQLNNVAKDEKFAFASMPAYFKAKEENLEDDIDLESNISCSSVNSASELQEEDEDEDSVLNGKQEESSDEQQRAYSSVNNNQKQDRKVPRFDEKRNFHNSNGENYFRRVTEDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -